Nanorana parkeri (Xizang Plateau frog): 108799622 Help Entry 108799622         CDS       T04897                                  Symbol SMARCC1 Name (RefSeq) SWI/SNF complex subunit SMARCC1   KO K11649   SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C Organism npr  Nanorana parkeri (Xizang Plateau frog) Pathway npr03082   ATP-dependent chromatin remodeling Brite KEGG Orthology (KO) [BR:npr00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     108799622 (SMARCC1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:npr03021]     108799622 (SMARCC1)    03036 Chromosome and associated proteins [BR:npr03036]     108799622 (SMARCC1) Transcription machinery [BR:npr03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      108799622 (SMARCC1) Chromosome and associated proteins [BR:npr03036]  Eukaryotic type   Chromatin remodeling factors    BAF complex     108799622 (SMARCC1)    PBAF complex     108799622 (SMARCC1)    GBAF(ncBAF) complex     108799622 (SMARCC1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SWIRM-assoc_2 SWIRM-assoc_3 SWIRM SWIRM-assoc_1 Myb_DNA-binding Myb_DNA-bind_6 Chromo HEAT_GCN1 Activator_LAG-3 Motif Other DBs NCBI-GeneID:  108799622 NCBI-ProteinID:  XP_018427015 LinkDB All DBs Position Unknown AA seq 1296 aa AA seqDB search MTGRKHSNANYFNGWREISLVGQEEGKISTFTEDGDRISQGLNTSMSRRKDLGQSILILK RHQCICCPLSQILRPGDKPVQLLARTSTKRVDGHQDETQIFQALSQDQETFLDIRQPTEY VQGSVGSPVWGGPSSLVTVVSGTGSDGKSHYVQADSPTNKALAALVSQLLQFQEDAFGRH VTSASSSRSGMKCFLDFKPSGALCHILGAAYKHRSDQGWRRFDLQNPSRMDRNVEMFMAI EKTLVQNNSLTRPTVYLVPEIELKLGNKLKDIVKRHQGTITEDKAKASHHVYPVPTSLDE ADEWLRPVMKKEKQFLVHWGYYPDSYDSWVPVSDLDAEVEDPPIPEKPWKVHSKWLLDTD LFNEWMNEEDYEVDENKKATNFRQRISLKNDESLRSPERKDRKSAGAPKKRKRSPSPQTP SESRKKPGKKSQGGLYGKRKWQKEEDEQEDLTKDMEDPTPVPNMEEVMLPKNVNPKKDSE HTPVKGGVVADLDEQEEEAVAASGKEDEDPSRGDQSRMIDNSEDNVTEQTNHIIIPSYAA WFDYNSIHVIERRALPEFFNGKNKSKTPEVYLAYRNFIIDTYRLNPQEYLTSTACRRNLT GDVCAIMRVHAFLEQWGLVNYQVDADSRPMAMGPPPTPHFNVLADTPSGLVPLHLRTPQI PSAQQMLNFPEKSKDKPADLQNFGLRTEIYSKKTLAKKSASAGREWTEQETMLLLEALEM YKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSNSSLGPLAYQPVPFSQSGNPVMS TVAFLASVVDPRVAAAAAKAALEEFSRVREEVPLELVEAHIKKVQEAAKALGKVDPTYGL ESSCIAGTAPEEPDKAAESTEEEKMETETPEASQPEKVSPRVKIEEGPETESSEKSDAPT EKKPEEEGAEPAAEEKAEEETEESKENVESTKEIDPIKKKMENDLSEANVAMAAAAALAS AATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLL TERQNFHMEQLKYAEMRARQQMEQQNLQQQQQQQQQQQQQHGQNLQQHGPNPQHPSPGPG APGMGHIPPTPHPGGMMGLPQQPQPPPYGAHHQMPPAHPPQAGQMPGPSSMMPGPPIGAR MMPNMHPAAGQPHPPPPQTAMPPMPGGMMGPRPPMAPNGMCVPGAAPRDGGCSPRWGLPP APRDWGSPRGHMVKSSYSQLRNDDGPESALVIRTDLKVSRLVGEEREMSPLLSEIVFQTA AEGSIGQSSSPFLWKTKVHYNIEVPCTPKLPNEKNP NT seq 3889 nt NT seq  +upstreamnt  +downstreamnt atgacgggaagaaagcattcaaatgccaattacttcaatggctggagggaaatttctttg gtgggacaagaggaaggcaaaatatcgaccttcacagaagacggtgaccgaataagtcaa ggcctcaacacgtcgatgtctaggcggaaagacctcggtcaaagcatactgatcctaaag cgccaccagtgcatctgctgccccctctctcagatcctgagacctggagacaaacctgtc cagctgcttgctaggaccagcaccaagagggtggatggtcaccaggatgagacccaaata ttccaagcattgtcccaggatcaggaaacatttctggacattcgacagccaacagaatat gtccagggaagtgtagggagccccgtctggggaggtccatcctccctggtcaccgttgtc tccggtacaggaagtgacgggaaatcccactacgtccaggccgattctcccaccaacaaa gctctggctgcgctggtctctcagctgctgcagttccaggaagatgcttttggacgtcac gtcacttcagcttcatcatcaagatccgggatgaagtgcttcttggattttaagcccagt ggtgccctctgccacatcctgggtgcggcgtacaagcaccggagtgaccaaggatggagg agatttgatttgcagaatccatcccgaatggaccgcaatgtggaaatgtttatggccatt gaaaagacgctggtacagaacaattctttgaccagacccacagtctacctcgtcccagaa attgagttgaagttgggcaataaattgaaagacatcgtgaagcgtcatcagggtacaatt acggaagataaggcgaaggcctcccaccacgtttaccccgttcctacctcgctggatgaa gcggatgaatggctgagacccgtgatgaagaaagagaagcaatttcttgtacactggggc tactacccggacagctatgactcctgggtgcccgtctcggatcttgacgctgaagttgaa gaccctccaattccggagaagccttggaaggttcattcaaagtggctgctggacacggac ctgttcaacgagtggatgaacgaggaggactacgaggtggatgagaataagaaggccacc aatttccggcagaggatctctctaaagaatgacgagtccctgcgcagtcctgagcggaag gatcggaagtctgctggcgcacccaagaaaaggaagcggtccccttcccctcagaccccg tccgagtcccggaagaagcccggcaagaaaagtcagggcggcctttatggcaagcggaaa tggcagaaggaagaggacgagcaggaggatctgaccaaagacatggaggaccccacaccc gtccccaacatggaggaagtcatgcttcccaaaaacgtgaacccaaagaaggacagcgag cacacaccggtgaagggcggagtggtggccgatctggatgagcaggaggaggaagccgta gctgccagtggaaaggaagatgaagaccccagccgaggagatcagagcaggatgatcgat aacagtgaagacaatgtgacggaacagaccaatcacatcatcatccccagctatgcggct tggtttgattataacagcattcacgtcattgaacgccgagctcttccagaattcttcaat ggcaagaacaagtcaaagaccccagaggtatacctggcctaccgcaacttcatcatcgac acctaccggctgaacccccaggagtatctgaccagcaccgcctgccgcaggaacctgacg ggagacgtgtgcgccatcatgagagttcacgcattcctggagcagtggggtctggtgaac taccaggtggatgccgattcccgaccaatggccatgggcccgcctccgacacctcacttc aacgtgctggcggacacgccgtccggattggtaccgctgcacttgaggactcctcagatt ccctccgctcagcagatgttgaatttccctgagaaaagcaaagacaaaccggcagatctg cagaactttgggctgaggacagagatctactccaagaagacattggccaagaagtcggcc agcgctgggcgggagtggacagaacaggagactatgctgctgttagaggctctggagatg tacaaagatgactggaacaaggtgtcggaacacgtgggcagccgcactcaggatgaatgt atcctgcacttcctccggctgccgattgaggacccgtacctggagaactccaactcttcc ctgggacccctggcctatcagcctgtcccgttcagccagtccggcaacccggttatgagc acggtcgccttcctggcctcggtggtggatcctagggtagctgcggcggccgcaaaagct gctcttgaggagttttcccgcgttcgggaggaggtgcccctggagctggtggaggctcat attaagaaggtacaagaagcggccaaggccctgggcaaggtggacccgacctatggcctg gagagcagctgcatagctggcacagcgcctgaggagcccgacaaggccgctgaaagcaca gaagaggagaagatggaaacggagaccccagaagcctcgcagccggagaaggtgagtcct cgggtgaaaattgaggaggggccggagactgagagcagcgaaaaatccgacgcgccaacg gagaagaagccggaagaggaaggggcggagcccgcggcagaagagaaagccgaggaggaa acggaagaatctaaagaaaacgtggagtccaccaaagagatcgaccccatcaaaaagaaa atggaaaacgatctctctgaagctaatgtagcaatggctgctgccgctgccctcgcctct gccgctacgaaagccaagcacctggctgccgtagaggagcggaagatcaagtcactggtg gctctgctggtggaaacgcagatgaagaaactggagattaaactgcggcattttgaagag ctggaaaccatcatggacagagaaaaggaagcgctggaacagcagcgtcagcagctcctg actgaacgccagaacttccacatggagcagctgaagtacgccgagatgcgggcgcgccag cagatggagcagcagaacctacagcagcaacagcaacaacagcagcaacagcagcagcaa cacgggcagaacctgcagcagcacgggccgaatccccagcacccatcaccaggccctgga gcccccggtatgggccacatccctcctactccccaccccggggggatgatgggtctccca cagcaaccgcagccacctccctatggcgctcaccaccagatgccacctgcccatccgcca caagcaggtcaaatgcctgggcccagctccatgatgcccggacctcctataggagcccga atgatgcccaacatgcacccagcagctggacaacctcaccccccacccccgcagacagcg atgccccctatgccaggtgggatgatgggaccgcggccgccaatggctccgaatggcatg tgcgttccgggggctgctccccgcgatgggggctgctccccgcgatgggggcttcccccg gctccccgcgattggggctcccctcgtggccacatggtcaagagctcgtactcccagctc cggaacgatgatggcccagagtccgccctcgtcatccgcactgacctcaaagtgagcagg ttggttggagaagaaagagaaatgtctccattgttatctgagatcgtgttccagaccgca gcggagggttccattggccaaagcagttcaccgtttctatggaaaactaaagtccactat aatatcgaggttccctgcaccccaaaactgccgaatgagaagaatccgg

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