Nanorana parkeri (Xizang Plateau frog): 108800790
Help
Entry
108800790 CDS
T04897
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108800790 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npr03019
]
108800790 (EXOSC1)
Messenger RNA biogenesis [BR:
npr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
108800790 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
108800790 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
GULLO2-like_3rd
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
108800790
NCBI-ProteinID:
XP_018428295
LinkDB
All DBs
Position
Unknown
AA seq
194 aa
AA seq
DB search
MAPVRWCVPGERLCSLEDCAPGHGTYCKHGYIFASLAGYVFKTSDNGLMPVLSVVRDADS
LLLPDVGAIVTCKVMSINPRFAKVQIMYVGSRALKNTFKGTIRREDIRATEKDKVEVYKC
VRPGDIVIGKVISLGDSQSSYLLSTAENELGVVVAHSEAGATMVPISWCEMQCPKTHIKE
PRKVARVQPEFLQT
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggctccggtgcgatggtgtgtgcctggtgagaggctgtgcagtctggaggattgtgct
ccggggcatgggacttactgcaagcatggctacatctttgcctctcttgcgggttatgtt
tttaagacaagtgacaatggtttgatgcccgtgttatctgtagtgagggacgcagattca
ctacttctgccagatgtgggagccattgtcacatgtaaggtgatgagcataaacccaaga
tttgctaaagttcagattatgtatgtcggctcgagagcgctcaaaaacaccttcaaaggc
acgatcagaagagaagacatcagagcaactgaaaaagacaaggttgaagtttacaaatgt
gttcggccaggagatatcgttataggaaaagttatatccttgggagattctcagtccagt
tacttgttgagcacagcagaaaatgagcttggagtagtagttgcacatagtgaagcaggg
gcaaccatggtgcctatcagctggtgtgagatgcagtgccccaaaacccatatcaaggaa
ccacggaaggtggcacgagtacagcctgagtttctgcagacttaa
DBGET
integrated database retrieval system
