Nanorana parkeri (Xizang Plateau frog): 108800952
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Entry
108800952 CDS
T04897
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npr04131
]
108800952 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
npr04147
]
108800952 (COPA)
Membrane trafficking [BR:
npr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
108800952 (COPA)
Exosome [BR:
npr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108800952 (COPA)
Exosomal proteins of bladder cancer cells
108800952 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
108800952
NCBI-ProteinID:
XP_018428434
LinkDB
All DBs
Position
Unknown
AA seq
1326 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWVLTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVDSD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNILYYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDSDSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSILIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTLSSVKIAKVKYVIWSSDMSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWEESGV
FIYTTSNHIKYALTTGDHGIIRTLDLPIYITRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKSCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDIDERVRILKNCGQKSLAYLTAATHGITDEEDKLRESFDL
EKEIIPEVDTDAKLLLPPPPVMPLDTNWPLLTVSKGFFEGTIASKAKGMAADVDIETVGG
EGWGEDAELQLDEDGFVDAGDAFGDEAPGKGQEEGGGWDVEEDLELPPELDVPSGQSGTG
EDGFFVPPTKGSSPAQMWCNNSQLSVDHILAGSFETAMRLLHDQVGVVNFGPYKQHFLHT
FSRGRSTYQALPGLPAMYGYPQRNWKDAGLKNGLPAVGLKLSDLIQRLQLCYQLTTSGKF
EEAVEKFRLILLSVPLLVVDNKQEISEAQQLITICREYIVGLAMEIDRKKLPKDTLEQQK
RICEMAAYFTHSNLQPVHMILVLRTAVNLFFKLKNFKTAAVFARRLLELGPKPEVAQQTR
KILAACEKNLTDTYQLNYDMHNPFDICAASYKPIYRGKPVEKCPLSGACYSPEYKGQICR
VSTVSERAPAFITPRVQSDVEMSHMTKLETPILVLKLCGFEPIMFDFSTVHVQVSFGPSR
DKQMDSKVVAFELQDDNKVKKQPVSLTFPRHTKGRLYVITNQKSKCHFCQEPEEKESNKK
VRSFLT
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccaagttcgagaccaagtccgctcgggtgaagggcctgagctttcaccccaag
cgaccatgggtcctcaccagcctgcacaacggcgtcatccagctctgggattaccgcatg
tgcaccctcatagacaagtttgatgaacacgacggtccggtccgcggcatcgatttccat
aagcagcagccgctgtttgtctctggaggagacgactacaagatcaaggtctggaattat
aagctgcgacgttgtctgttcaccctgctgggtcacctggattatatccgcaccaccttc
ttccatcatgaatacccctggatcctcagtgcctccgacgatcagaccatccggatctgg
aactggcagtctcgcacttgtgtctgcgtcctgacgggtcacaaccactacgtcatgtgc
gcccagttccacccatcggaagatctggtcgtttccgccagtctggaccagacagtgcgc
gtttgggatatttctggcctgcgcaaaaagaacctttctccgggcgcggtggactccgac
gtgcgtggcatcaccggcgtggatttgtttgggaccaccgacgccgtggtgaagcatgtc
ctggagggtcacgatcgtggcgtcaactgggccgctttccaccctaccatgcccctcatt
gtgtccggagccgacgacaggcaggtgaagatctggagaatgaacgaatccaaggcctgg
gaagtggacacttgccgtggacattacaacaacgtctcctgcgccgtcttccaccctcgg
caggagctgattctgagtaactctgaagataagagcatccgtgtctgggatatgtccaag
agaaccggagtccagaccttccgcagagaccacgatcgcttctgggtcctggccgctcac
cccaatctcaacctttttgcagcaggtcacgatgggggaatgatcgtgtttaagttggag
cgggaacggccagcctacgctgtccacgggaacatcctgtactacgtgaaggaccgcttc
ctccgccagctggacttcaacagctccaaggacgtggccgtcatgcagctgagaagtggc
tccaagttcccagtttttaacatgtcctataacccagctgagaacgccgtactgctctgc
acgagagccagcaacctggagaacagcacttatgacctgtacaccatccccaaggattcg
gactctcagaaccccgatgctcctgaagggaagcgctcctccggcctgaccgctgtctgg
gtggctcgcaatcgattcgccgtcctggaccgcatgcattctatcctcattaagaacctg
aagaacgagatcaccaagaaagtccaggtgccaaactgcgacgagatcttctacgccggc
accgggaacctgctcctccgcgacgccgactccatcacgctgttcgatgtgcagcagaaa
cggacattgtcttctgtgaagatcgctaaagtcaagtatgtgatctggtcctccgacatg
tctcacgtggccctgctggctaaacatgcgatcatgatctgcaaccgaaagctggaatct
ctttgtaacatccacgagaacatacgcgtgaagagcggcgcatgggaagagagcggcgtc
ttcatctacacgaccagcaaccacatcaaatacgcactcaccaccggtgatcacggcatc
attcgcactctggatctgcccatctacatcacccgggtgaagggtaacaacgtttactgc
ctggaccgggagtgtcgcccgcgggtgctcaccattgaccccacagagtttaaattcaag
ctggccctgatcaataggaaatacgacgaggtgctgcacatggtgaggaacgccaagctg
gtgggacagtcgatcattgcctacctacagaagaagggttaccccgaggtggcgctgcac
tttgtgaaggacgagaagacgcggtttagcctggccctggagtgcgggaatattgagatt
gctttggaagccgcgaaggctctggatgacaagagctgctgggagaagctgggcgaggtg
gctctgctgcagggcaaccatcagatcgtggagatgtgctaccagcgcaccaagaacttc
gacaagctcgccttcctatatctcatcaccgggaacctggagaaactgcgcaagatgatg
aagatcgctgagatccggaaggacatgagcggccactaccagaatgccctctacctggga
gacattgatgagagagtccggatcctaaagaactgtgggcagaagtccttggcttacctc
actgcagccacgcacggcattacagacgaagaagacaaactgcgggaatccttcgacctg
gagaaagaaattattccagaggtagacacggatgcgaaactgctgcttccgccacctcca
gttatgccgctggataccaactggcctctgctgaccgtgtccaagggcttctttgaaggg
accatagcaagtaaagccaaaggtatggcggcagacgtcgacatagaaacggtgggagga
gaaggctggggagaggatgccgagcttcagctggatgaagatggctttgtggacgcaggt
gacgcatttggagatgaggctcccgggaaaggacaggaagaaggaggcggatgggacgtg
gaagaggatctggagctgccacctgaattggatgtcccctccggccaatccggaactgga
gaagatggcttctttgtgccacccaccaagggcagcagcccggcccagatgtggtgtaac
aactcccagctttccgtggatcacatcttggctggttcgtttgaaacggcgatgcggctc
ctccatgatcaggtgggagtggtgaacttcggtccatacaagcaacatttcctgcatacc
ttttcccggggacgcagcacctatcaggctctgccggggcttcccgccatgtacggctac
ccacagcgcaactggaaggacgccggattgaagaacgggcttcccgcggtgggcctgaag
ctcagcgatctcatccagcggctgcagctgtgctaccagctcaccacgtccggcaagttt
gaagaagcggtggagaagttccggctgattctgctcagcgttccccttctggtggtggac
aacaagcaggagatctccgaggctcagcagctgatcaccatttgcagggaatatattgtg
gggctcgccatggaaatcgatagaaagaaacttccgaaggacaccctggagcagcaaaag
aggatctgtgagatggcggcctacttcacgcactccaacctgcagcccgtccacatgatc
ctggtgctcaggacggccgtcaacctcttcttcaagctcaagaacttcaaaacggccgcg
gtgttcgccaggcggctgctggaactggggcccaaacccgaagtggcacagcagacccgt
aagatcctggcagcatgcgagaagaacctcacggacacgtaccagctcaactacgacatg
cacaaccccttcgacatctgcgccgcctcgtacaagcccatctaccgggggaagccggtg
gagaaatgccccctcagcggcgcctgctacagcccggagtacaaaggacagatttgcaga
gtcagcacggtaagtgaacgggcgccggcttttatcaccccccgagtccaatcggatgtg
gaaatgagtcacatgactaaattagagacccctatcctggtgttaaagctttgtgggttt
gagcctataatgttcgatttcagcactgtgcatgttcaggtttcctttgggccgtcaaga
gacaaacaaatggattccaaggtcgtcgcattcgagctccaggatgataacaaggtgaag
aaacagccggtgtcgctgacctttccccgacataccaaaggccgcctgtacgtcatcacc
aatcagaaaagcaaatgccacttttgtcaggagccggaggagaaggaaagcaacaaaaag
gtgagaagcttcctcacataa
DBGET
integrated database retrieval system
