Nanorana parkeri (Xizang Plateau frog): 108801025
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Entry
108801025 CDS
T04897
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03013
Nucleocytoplasmic transport
npr03015
mRNA surveillance pathway
npr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108801025 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
108801025 (EIF4A3)
03015 mRNA surveillance pathway
108801025 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npr03019
]
108801025 (EIF4A3)
03041 Spliceosome [BR:
npr03041
]
108801025 (EIF4A3)
03009 Ribosome biogenesis [BR:
npr03009
]
108801025 (EIF4A3)
03012 Translation factors [BR:
npr03012
]
108801025 (EIF4A3)
Enzymes [BR:
npr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108801025 (EIF4A3)
Messenger RNA biogenesis [BR:
npr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108801025 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
108801025 (EIF4A3)
Spliceosome [BR:
npr03041
]
Complex C
Other components
EJC/TREX
108801025 (EIF4A3)
Ribosome biogenesis [BR:
npr03009
]
Eukaryotic type
90S particles
Helicases
108801025 (EIF4A3)
Translation factors [BR:
npr03012
]
Eukaryotic type
Initiation factors
eIF-4
108801025 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
108801025
NCBI-ProteinID:
XP_018428496
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MASATANVAGGVTSGSSRKRLMREEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAY
GFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTR
ELAGQIQKVLLALGDYMNVQCHSCIGGTNVGEDIRKLDYGQHVVSGTPGRVFDMIRRRSL
RTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDP
IRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEK
MREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPN
NRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgcaacggcaaacgtagccggtggggtgaccagcggctccagccggaagagg
cttatgagggaagaagacatgaccaaagtggagttcgagaccagcgaggaggtggatgtg
acccctaccttcgacaccatggggctgcgggaggacctgctgcggggaatctatgcctat
gggtttgagaaaccgtcggctattcaacaaagagcgatcaagcagattatcaaaggaaga
gatgtaatagcacaatcacagtctggtacaggcaaaacagcaacattttgtgtgtctgtt
cttcagtgtttggatattcaggttcgtgaaacacaggctttaatcttggctcctaccaga
gaattggcagggcagatccagaaggtgcttcttgctttgggagactatatgaatgtacaa
tgtcattcgtgtattggagggaccaatgttggtgaagatatccgaaaactggattatggg
cagcatgttgtttctggaacacctgggcgtgtttttgatatgatccgccgcagaagttta
cgaacacgtgccattaaaatgctggtcttggatgaagctgatgagatgcttaataaaggg
tttaaggaacagatttatgatgtgtataggtaccttcctcctgccacccaagttgtcctg
atcagtgctactttgccacatgagatcctggaaatgaccaacaagttcatgactgatccc
atccgtatccttgtgaaacgtgatgagttgacgctggaaggaattaagcagtttttcgtg
gcagtggagagagaagaatggaagtttgatactttgtgtgatttgtatgatacacttaca
atcacacaggctgtgatcttctgcaacacaaaaagaaaggtggattggttgaccgagaaa
atgagagaagccaactttacagtgtcttcaatgcacggtgacatgccacagaaagagcga
gagtccatcatgaaagaatttagatctggtgccagtcgagttcttatttccactgatgtg
tgggccagaggactggatgtgccacaggtttccctgatcattaactatgacctccccaac
aacagagaattgtatatccacaggattggtcgttcaggacgttacggaaggaaaggtgtg
gccattaactttgtaaagaatgatgacattcgtatcttgagagacattgaacagtactac
tctactcagattgatgaaatgcccatgaatgttgctgatctcatttga
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