Nanorana parkeri (Xizang Plateau frog): 108801288
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Entry
108801288 CDS
T04897
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
npr04040
]
108801288
Ion channels [BR:
npr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108801288
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRCC1_N
Ion_trans
TRP_2
Ank_2
PKD_channel
Ank
Ank_3
Ank_4
Borrelia_orfA
Motif
Other DBs
NCBI-GeneID:
108801288
NCBI-ProteinID:
XP_018428724
LinkDB
All DBs
Position
Unknown
AA seq
1762 aa
AA seq
DB search
MMAPIRIQHVVSFSSQDPKQPVDNLLRDDLQPWLSCPRDRSRQLKVELQLERARHIAYID
VGNSGSAFLQIDVGRSSWPLDKAFVPLLPTATLMSPADSKLEQNGRGVRMFKEGDFLEGT
AAEKWDRLRVTCGQPFNKQTQFGLSFLRLRSALEEENRTPATQLYQSPPLSGVPPGKLKK
EDDASSRDPLEERIKEKLQRVMSPPSPRTPCLSRTVRMVLSAAQSRKRSHPAASLPSPPI
PLTPGEGDSQRGESPVSSGYFPADVLPVHASRCGEAYLPPSVILSSSDDDSLDGFQDIRD
VPESRVACPMCTFRFRSSEIERHASTCGEPRCTVLAAKRFPGSEPWHGLRCDPVSEDIVT
VGVKAEGPSADVICSTLTFRPFSLEKAPSCCSCSWSTTWISGLSPLLTSSGQKPSSAPAA
QDCEYLRPFLVLGFLAFPLQGSIMSSLRHIEDRLTARGDLGPWCPSDTRSVYMVFTEGPD
ACNLEPGDPIAIWSSSSALSSAEDEAFTMTTGTLMSTLDFRSVCAQVLEHSLCRASKSTP
VSCPSESASNPPESFIKLGLRPVTFTDLVLESQQSISEEALQSPAQTLIYRGLFQCSLMH
QEDQPAVLGLGPLRAPTFQRPLHCTFLCTEWKHLEGEEFIGAGTRAKNFRLIEGMTMEGI
WRNFLRRLQISHRRTHLQIFRFYEALWTYSIPERARAGNRVQVRDCQTSAECRRRRPWAE
EGSAAPRHSHRSRDMEHLTAANWREIVNKKLKFPVSLINAIHDGNLTQVQQLLQVSDGIL
RQLDDSEDRSWREALNLAIRTGNEEIMKTLLHCVKFDFRQIHEALLVAVDTNQPHVVKML
LDRLDQEKGSKMDIKSFSSAFFDNSIDNSRFAPGVTPLTLACEKDLYEIVEMLMKKGHII
TTPHKISCACLECSNGRKYDLLKFSLSRINTYKGIASRAYLSIASEDAMLRAFKLSREIK
RLSRKEPEFKPEYLALEDLCQEFAVELLGMCRNQSEVTAVLNDCEDDSDEEELDNQAFEE
GIPNLARLRLAVHHKQKRFVAHPICQQVLSSIWSGKLSGWRGSTMVWKLFIACTIFLSMP
LLCLIYWLVPKSQVGRVLKIPVIKFLLHSASYLWFLIFLLVESITMEKRHDIYEGRNQTI
WQNSLHMIWVAGFLWHECKEVWIEGLRSYFLDWWNFLDIVTISMYLASFSLRILVAVRGY
LSCQDDPASDTCFYFTKAGRSEWNTEDPQFIAEVLFAVTSMLSFTRLAYILPAHETLGTL
QISIGKMIDDMIRFMFILMIIVTAFLCGLNNIYVNYTDSDKLGNFNETFQFLFWTMFQMV
ERSTVDMNHYVVAEFVGRALYGLFTSIMVIVLLNMLIAMITNSFQKIEDDADVEWKFARS
KLYLSYFREGLTLPVPFNIIPTPKSLFYSISLFYSIRFHPHFHHPHLQSLIVSSTPSRTI
LISIIPIYNPSYSLLLHQVPSSSPSSPSTIPHSLFYSISLFYSIKDHPHLHHAHLQSLIV
SSTPSGTILISIIPIYNPSQSLLSLGDSIGEISESRIAERFHCWSIQDNNGFECDGFMDF
ALCVWHGSRITPVFLSNHRAIFRFVCCYKPKKKQDYPPISIISNRGVGIGESEGSRISYR
LQVIKALVQRYIDTARREFEESKRKDLGNRITELNKNVIRLHSEVKQLRRSLSDKGAVVS
AKESENVLSRYIMKVKSTFQNYDQESVGSGKDSSEVTLHQDSFRSILPEDDCPPYPDMPT
ANHLDQSDDIGDHDNSEPGEDM
NT seq
5289 nt
NT seq
+upstream
nt +downstream
nt
atgatggcccccatcaggatccagcatgtggtgtccttcagctcccaggatcccaaacag
cccgtagacaacctcctgagagacgacctccagccgtggctgagctgcccccgagaccgc
agccgccagctcaaagtggagctgcagttggagcgagctcgccatatcgcctacatagac
gtgggaaacagcggttcggccttcctgcagattgacgtcgggcgctccagctggcctctg
gataaagcgttcgtccctctgctccctacagccaccctgatgtccccggcggactctaaa
ctggagcagaatggccggggggtccggatgttcaaagaaggtgatttcttggaggggacg
gccgctgagaaatgggatcggctgcgagtcacctgcggtcagcctttcaacaagcagaca
cagttcggtttgtccttcttacgcctccgatctgctctggaagaagagaaccggacgccg
gcgacccaactttatcagtctcctcccctctccggggtccctccagggaagctgaagaaa
gaagacgatgcttccagccgggatccattagaggaacggataaaggagaagctgcagcgg
gtcatgtcccccccttctccccgcaccccgtgtctcagccgcacagtccgcatggtgcta
tcggcggcccagtcacgtaaacgcagccaccccgccgcatcgctaccaagtcctcccatc
cccctaacgccaggagagggcgacagccagcgaggagagagcccagtgtcctctgggtac
tttcccgccgatgtccttcctgtgcacgcctcccgctgtggggaagcgtatctgccgccc
agtgtcatcctatcatcttcagacgacgactccttggacggctttcaggacattcgggat
gttcccgagtcccgggtcgcctgtccaatgtgtacgttccggttccggagcagcgagatt
gagcggcacgccagcacgtgtggagaaccacggtgtactgtgttagcggcaaaacgcttt
ccaggttcagagccgtggcacggtctcaggtgtgaccccgtctctgaagacattgtgaca
gtgggggtcaaggctgagggacctagtgctgatgtcatctgctccacgctgactttccgg
ccattcagcctggagaaggcaccatcctgctgtagctgctcctggagcactacgtggatc
tctggtctgtctccactgctgacctccagtggccaaaaaccctcatcagcaccagcagcc
caggattgtgagtacctgaggcctttcctcgtattgggctttcttgcgtttccactacaa
ggaagcatcatgtcttcgctaagacacatagaggacaggctaactgccagaggtgacctc
ggcccatggtgccctagtgatacaaggagtgtttatatggtgttcacagaaggacctgat
gcctgtaatctagaacctggggaccccattgccatatggtcatcatcgtctgcgttgtct
tcagctgaggatgaggccttcaccatgaccaccgggaccttaatgtccaccctggacttc
agatctgtttgtgcccaggtactggagcattctctctgcagagcctctaagagcaccccg
gtgtcatgtccttccgagtcagcttctaaccccccagagtcctttatcaaacttggcctg
cggcccgtcacctttactgacttagttttagagtcccaacagtctatctctgaagaggca
ctgcagtcccctgcccagacactgatttacagggggttgtttcaatgctcgttgatgcac
caggaggatcagccggctgttctaggccttggtcctcttagagctcctacattccaaaga
cctcttcactgcacgttcctctgcacggaatggaagcaccttgaaggggaagaattcata
ggagcgggaacccgagctaagaacttccgtctgattgagggaatgaccatggaggggatc
tggagaaacttcctcaggaggctgcagatcagccacaggaggacccatctccagatcttc
aggttctatgaagccctctggacgtactccatccccgagagggctcgcgctggaaacaga
gtgcaggtgagagactgtcagacatcagcggagtgccggaggagacgtccatgggctgag
gaggggagcgccgcgccgcgccacagccacaggagccgagacatggagcacttaacggca
gccaactggagggagatcgtcaacaagaagctcaagtttccagtgtccctcatcaacgcc
attcatgatggtaacctcacccaagtccagcagctcctacaggtcagcgatgggatcctg
cggcagctggacgacagcgaggaccggtcctggcgggaagctctcaatctcgccatccgg
acggggaatgaggagatcatgaagactctgctgcactgcgtcaagtttgacttcagacag
atccatgaagccctcctggtggctgttgacaccaaccaaccgcacgtggtcaaaatgctg
ctggaccgcctggaccaggagaaagggagcaagatggacattaagtcgttctcctcggct
ttcttcgacaactccatcgacaactcccgctttgctcctggcgtgaccccgctgacactg
gcctgtgagaaggacctctatgagatcgtggagatgttgatgaagaaaggccatatcatc
acgactcctcacaagatctcttgtgcgtgcctggagtgcagcaatggacgcaagtatgac
ctgcttaagttctcgctgtcccgcatcaacacgtacaaaggtatagccagcagggcgtat
ctgtccattgccagtgaagacgccatgttgagggccttcaagctgagccgggagatcaaa
cgtctttccaggaaagaacccgaatttaagccggagtacctggccctggaggacctgtgt
caggagtttgcggtggagctgctgggcatgtgccgcaaccagagcgaagtcacggcggtg
ctgaacgactgcgaggacgacagcgatgaggaggagttggacaatcaggcctttgaggaa
gggatccccaacctagccaggctgcggcttgccgtacaccacaaacagaaaaggtttgtg
gcgcatcccatctgccagcaggtcctctcctccatctggagtgggaagctgtccgggtgg
agggggagtactatggtttggaagctcttcattgcttgcaccatcttcttgtccatgcct
ctcctgtgcctcatctactggctggttcctaaatcccaggtggggcgagtcctgaaaatc
ccggtaataaagttcctcctccactcggcttcgtacctgtggttcctgattttcctcctg
gtggagtccatcaccatggagaagaggcacgacatatacgagggccggaaccaaaccatc
tggcagaactcgctacacatgatctgggttgccggatttctgtggcatgaatgtaaggag
gtctggatcgagggactgagaagttacttcctggactggtggaacttcctggacatcgtc
accatcagcatgtacctggcctcgttctccctgcggatcctggtggcagtgaggggatac
ctgtcctgccaagacgaccccgcgtccgacacctgcttctacttcaccaaagcaggccgc
tcggagtggaacacggaggacccgcagttcatcgccgaggttctgtttgctgtcaccagc
atgctgagctttacacgtttagcctatatcctccctgcacacgagaccctcgggaccctg
cagatctccattggcaaaatgatcgatgacatgataaggttcatgtttatcttgatgatt
attgtcaccgccttcctgtgcggcctcaacaacatctatgtgaactacaccgattcggac
aagctgggcaacttcaacgagaccttccagttcctcttctggacgatgttccagatggtg
gagcggagtaccgtggacatgaaccactacgtcgtggcagaatttgttggccgggcgctg
tatggactctttaccagtatcatggtgattgtcctactcaacatgctcattgccatgatc
accaactccttccagaagatcgaggacgacgctgacgtcgaatggaaattcgcccgctcc
aaattgtatctgtcctattttagagaaggactgactcttcccgttccattcaacatcatc
cccactccaaaatctctcttctactccatcagtctcttctactccatcaggttccatcct
catttccatcatccccatctacaatccctcatagtctcttctactccatcaaggaccatc
ctcatctccatcatccccatctacaatccctcatactctcttctactccatcaggtacca
tcctcatctccatcatccccatctacaatccctcatagtctcttctactccatcagtctc
ttctactccatcaaggaccatcctcatctccatcatgcccatctacaatccctcatagtc
tcttctactccatcaggtaccatcctcatctccatcatccccatctacaatccctcacag
tctcttctatcgctcggtgattctattggtgagatctctgagtcaagaattgcagagaga
tttcactgttggagcatccaagacaacaacggtttcgagtgcgatgggttcatggacttt
gccctctgtgtatggcacggctcccgaataacgccagtatttctgtccaatcacagggcc
atttttcgatttgtgtgctgctacaaacccaagaagaagcaagattacccgcccatctcc
atcatttctaacaggggagtcggcattggagagtccgaggggagccgaatctcgtaccgc
ctgcaggtgatcaaagctctggtgcagagatacatcgacacggctcgcagggagttcgag
gaaagcaaacggaaagatcttggcaaccggatcacggagctgaacaagaacgtcatccgt
ctccattcggaggttaaacagttgcgtcgttccctatcggacaagggagcggtggtcagc
gctaaagaaagtgagaacgtgctgagccggtacatcatgaaagtaaaaagcacctttcag
aactacgaccaggagtcggtagggtctgggaaggactcgtctgaggtcactttgcatcag
gatagcttccggagcattctgccagaggacgactgtccgccgtacccggatatgccgacg
gctaatcatctggaccaaagcgacgatattggagaccatgacaactcagagccaggagag
gacatgtga
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integrated database retrieval system
