Nanorana parkeri (Xizang Plateau frog): 108801484
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Entry
108801484 CDS
T04897
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108801484 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npr03021
]
108801484 (TAF5L)
03036 Chromosome and associated proteins [BR:
npr03036
]
108801484 (TAF5L)
Transcription machinery [BR:
npr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108801484 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
108801484 (TAF5L)
Chromosome and associated proteins [BR:
npr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
108801484 (TAF5L)
STAGA complex
108801484 (TAF5L)
TFTC complex
108801484 (TAF5L)
SAGA complex
108801484 (TAF5L)
SLIK complex
108801484 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
TFIID_NTD2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_SPT8
RMC1_N
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD40_RFWD3
DUF7165
PEP5_VPS11_N
PROPPIN
Ge1_WD40
Cytochrom_D1
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
108801484
NCBI-ProteinID:
XP_018428868
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MKRVRTEQIQLAVTCYLKRRHYIDIEGSLKQGLRLCQTAEEMAANLNVHAESSCANAVSS
APCQVDPQQYELQFARLRNFLSEENCPYSQDVSSLLYPLFVYLHLDMVQNSLKSMVDSFY
SRFHGMFLHHPAQKDIIKQLQTTMTMQDIHSNIKLRAFLDNKYVVHLQEDSYNYLLRYLQ
SDNNSALLKALTMHILLDVQPVRLTEYQLYASDTFSARGESNNLDSQDVPAPILQNEAAL
EQLQDCIKKVKDGPPSLTTVCFYAFYNTENLLNTAEISPNGKLLAAGFDNSSVKLWSLRS
KKLKTQPHTVNVSHIRLACDILEEEGEDEDQAGSEMKILRGHCGPVYCTRFLSNSSGLLS
CSEDSFIRYWDLKSYTNTVLYEGHAYPVWDLDVSACSLFFASGSHDRTAKLWSFDRTFPL
RIYAGHLADVDCIKFHPNSNYLATGSTDKTVRLWSSQQGNSVRLFTGHRGPVLALAFSPN
GRYLASAGEDQRLKLWDLASGTLYKELRGHTDNINSLAFSPDSSLIASASMDNSVRVWDI
RNTYCNVPSDGSSSELVGVYTGQTNNVLNVQFMACNLLMVTGTAQEQQEHLC
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgggttcgcacagagcagattcagttggcagtaacttgctatttaaaacgccgc
cactatatagatattgaaggatccctaaagcaagggctgcggctttgtcagactgcagag
gaaatggcagctaatctaaatgtacatgcagaatctagctgtgccaatgcagtgtcttca
gcaccctgccaggttgacccacaacaatatgaattgcagtttgcacgacttcggaatttc
ctttcagaagaaaattgcccctacagccaagatgtgtcatctctactatatcctctcttc
gtctacctccacctggacatggtccaaaatagccttaaaagcatggtggatagcttctac
agtcgcttccatggcatgtttcttcatcatccagcacagaaagatataatcaaacaactt
cagactacaatgaccatgcaggacattcactcaaacatcaaactgagagcatttctagat
aacaagtatgtggtccacctgcaagaggatagctacaactaccttctacgctaccttcaa
agtgataacaacagtgcccttctcaaggccctcaccatgcacatcctgcttgatgttcaa
ccagtcagactcacagagtaccagctgtatgcaagtgataccttttctgcaagaggggag
agcaacaaccttgactcacaggatgttccagctcctattctgcaaaatgaagctgctctt
gaacagctgcaagactgcataaagaaagtgaaggatgggccaccttcattgacaactgtg
tgtttttatgcattctacaacactgaaaacttgctgaacacagctgagatttcccctaat
ggcaaacttctggctgctggatttgacaactcttctgtgaaactgtggagtctgaggtca
aaaaaactgaaaacacaaccacacaccgtgaatgtttctcacatacgactagcttgtgat
atcttagaagaggagggtgaagatgaagatcaggctggtagtgaaatgaagatacttaga
ggacactgtgggccagtttattgtacccgtttcctttccaatagctctggccttttgtca
tgttctgaagattcattcatacgctactgggacctcaaatcctacacaaatactgtcctg
tatgaaggtcatgcgtatcctgtctgggatttagatgttagtgcctgtagtctttttttt
gcaagtgggtctcatgaccgcactgccaagctgtggtcatttgataggacatttcctctc
agaatatatgcagggcatttagctgatgttgactgcattaaatttcaccccaactccaat
tatcttgccacaggatctactgataaaacagttcgattatggagcagtcagcaaggaaac
tctgtaagactctttactggacaccgagggcctgtgcttgcccttgctttttccccaaat
ggacggtacttggcctcagctggggaggatcaacgtcttaaactatgggatttggcatcg
ggaacactctataaagagctgagaggtcacactgacaatattaacagccttgcatttagt
ccagacagcagcttaattgcatctgcatctatggacaactctgtccgtgtatgggatatt
cgaaatacttattgcaacgtcccttctgatggttcttctagtgaactagttggtgtatac
acagggcagactaataatgtgctgaatgtccaatttatggcatgtaatctacttatggtt
actggaactgcacaagaacagcaggagcatttatgctag
DBGET
integrated database retrieval system
