Nanorana parkeri (Xizang Plateau frog): 108801624
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Entry
108801624 CDS
T04897
Symbol
HERC4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108801624 (HERC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npr04121
]
108801624 (HERC4)
Enzymes [BR:
npr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108801624 (HERC4)
Ubiquitin system [BR:
npr04121
]
Ubiquitin ligases (E3)
HECT type E3
108801624 (HERC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
108801624
NCBI-ProteinID:
XP_018429019
LinkDB
All DBs
Position
Unknown
AA seq
901 aa
AA seq
DB search
MALSRESQIFAWGANRYGQLGLGYEQKNVNAPRPLKSLSGIPFHQIAAGGAHSFALTLSG
AVFGWGRNKFGQLGLNDEKDRDFPFLLKSLRSHKIVYICCGEDHTAALTKEGGVFTFGAG
GYGQLGHNSTTHEINPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGT
GSTCNRKSPFPVKGNLLSHSDYSQHSEDVKGYYCVKKMYSGGDQSFAHYFHIKNCLPPDD
FRICNHSRCIWTINEELIQRWLNFSSGRLPPDIVNEIDKVFSSAACLNGSFLSTSNNDHY
RTGAKFSGIDMNSARLLFHKLLDSANQQTVQQVAASLEKNLIPSLTSSPPDIEALRLYLT
LPECPLMTDPNNFFSLAVPFGTAIISLKKSPLKILENWWSVLEPSEFMRLVQLFKDVVLH
LLKLAKNGILFAERILFNTFLNTAFKILEILHRVNEKSAQIIPYDKFYIHEIQDFINIQK
EYVDWMQQRMHGAGPDGSLTICTYPFVFDAQAKTTLLQTDAAIQMQMAVEHAHRQNFSSM
FLPVVVESVDPCLILIVRRDNIVGDAMEVLRKTKNIDYKKPLKVIFVGEEAVDAGGVRKE
FFLLIMRELLDPKYGMFHYYDESRLIWFSDQTFEDSDLFHLIGVVCGLAIYNFTIVDLHF
PLALYKKLLKKKPALEDLKELRPDVGRSMQLLLNYTEDDIEETFCLNFTITVDNFGTTEV
RELIPNGAETTVNKKNRQEFVDAYVDYVFNRSVASLFEAFYSGFHKVCGGSVLELFQPNE
LQAMVIGNTNYDWKTLEKNTEYKGEYWADHPTIKIFWEVFHELSLEKKKQFLLFLTGSDR
IPILGMKSLKLIIQPTGGGEDFLPVAHTCFNLLDLPKFTSKETLSAKLIQAIDHYEGFSL
V
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggctctctcaagagaaagtcaaatctttgcctggggagcaaaccgatacggccagctt
ggtctgggctatgagcagaagaatgtaaatgcacccagacccttaaaatctttatcaggg
atcccatttcaccagattgctgctggaggtgcccacagctttgcactgacactttcaggt
gccgtttttggctgggggcggaacaaatttggtcagcttggccttaatgatgaaaaagac
agagattttccatttcttctcaagtcactgcgctctcataagattgtatatatctgctgt
ggagaagaccacactgctgcacttactaaggagggtggcgtgttcacctttggagctgga
ggatatgggcaactaggccacaattctactactcatgaaattaacccaaggaaagtgttt
gagctcatgggcaacattgtcacacagattgcatgtggcagacaacacacgttagcattt
gttccttcatccgggcgcatctactcttttggattaggaggcaatggacaattagggact
gggtctacgtgcaatagaaaaagtccattccctgtaaagggaaacttactatcccatagt
gattactcccagcactctgaggatgtgaaagggtattactgtgtgaagaagatgtactct
ggtggagaccaaagttttgcacattattttcatataaagaactgccttcctccagatgac
ttcagaatctgtaaccattccaggtgcatatggaccataaatgaagagctcatccagagg
tggctgaatttctcatctggaaggcttccaccagacatagtaaatgaaatcgacaaagtg
ttttcatctgctgcctgcctgaatggaagctttttgtctaccagcaataatgatcattat
agaacgggtgctaaattctcagggatagatatgaattctgcaaggcttctctttcacaag
ctgctggattcagcaaaccaacaaaccgtacaacaggtggctgccagtttagaaaaaaat
cttataccaagcctaacaagttcacctcctgacattgaagctttgagattgtacctcacg
ttgccagagtgtcctctgatgacagatcccaacaattttttctctttagcagtgccattt
gggacagcaattatcagccttaagaaatcgccactgaaaattctagaaaattggtggtct
gtactcgaaccctccgaattcatgcggctagtacagctctttaaagatgttgtgttacat
ctcctgaaactagcaaaaaatggaatcctatttgctgaaagaatacttttcaacactttt
ctgaatacagccttcaaaattcttgagattctacatagggtgaatgagaagtcagcacag
attatcccctatgataagttctacattcatgaaatacaggactttattaatattcagaaa
gaatatgtggattggatgcagcaacgaatgcatggtgcggggccagatggttctctcact
atttgcacttatccttttgtgttcgatgcacaagccaagacgacattgctacagactgat
gcagccatacaaatgcagatggccgttgagcatgcccacagacagaatttttcctccatg
tttcttccagtggttgttgagtcagtggacccgtgtcttattttaatagtacgcagagac
aatatagtgggagatgctatggaggtgttaagaaaaaccaagaacattgactacaagaag
ccattaaaggtcatctttgtgggtgaagaggctgttgatgctggtggagtccgcaaggag
tttttcctgcttattatgagggaactactagatccaaagtatggaatgtttcattactat
gacgagtcgaggctcatctggttttctgaccagacatttgaagacagcgatttgttccac
ctcattggtgttgtttgtggtttggctatttacaactttacaattgttgatcttcatttt
ccactggccttgtataagaaactgctcaaaaagaaacccgcactggaagatcttaaagag
ctaaggccagatgttgggaggagcatgcagctgctgttgaactatacagaagatgacatc
gaagagacattttgtcttaactttacaatcacagtcgataattttgggacaacggaggtc
agagagctcattccaaatggtgccgaaacaactgtgaacaagaaaaacaggcaagaattt
gttgatgcctacgtggactacgtcttcaaccgctctgtggcttccttattcgaggcattt
tactcaggtttccataaagtgtgtggaggcagtgttctggagctctttcagcctaatgaa
ctgcaggccatggtcattggcaacacaaactacgactggaagacgcttgagaagaatacg
gaatataagggcgagtattgggcagatcacccgaccattaaaatcttctgggaagttttc
catgaattatccctggaaaagaaaaagcagttcttattgtttttgactggaagtgaccgt
atcccaattcttggcatgaaaagtttaaaacttattattcagccaacaggaggaggggaa
gatttcctacctgtcgctcacacctgctttaatctgttggaccttcccaaattcaccagc
aaagagacactgagtgccaagctgattcaagccattgaccattatgaaggcttcagcctt
gtgtga
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