Nanorana parkeri (Xizang Plateau frog): 108801839 Help Entry 108801839         CDS       T04897                                  Symbol NUP188 Name (RefSeq) nucleoporin NUP188 homolog   KO K14311   nuclear pore complex protein Nup188 Organism npr  Nanorana parkeri (Xizang Plateau frog) Pathway npr03013   Nucleocytoplasmic transport Brite KEGG Orthology (KO) [BR:npr00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     108801839 (NUP188)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:npr03019]     108801839 (NUP188) Messenger RNA biogenesis [BR:npr03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      108801839 (NUP188) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Nup188_N-subdom_III Nup188_N Nup188_SH3-like Motif Other DBs NCBI-GeneID:  108801839 NCBI-ProteinID:  XP_018429259 LinkDB All DBs Position Unknown AA seq 1731 aa AA seqDB search MAADGGLDVRSSRELWTILLGRSAMRDPMQVKAELDRYGGRFLQGLAFYKLPSTGSADKV KASNAAPALKELGLRLSKFLGLDEEQSVQLLQCYLQDDYRGTQDSIKLVPQDERQSQALM LKMAEYYFEDRMCMLRCVLHLLTYFQDEKHPYKKEFNKCMDVLEQGDLIGKYIKKIEELS KEDAPTWETHGNLMTERQVSRWFMQCLREQAMLLEIIFLYYAYFAIPPANLLSLTKLFTE QGFGRRQQNRHLVEQSLDALIDRIGYFEVLILLEGIDMDSLQECALKENAEHPLNNEHQI CKEMDQILLTFGDIPHHAPVLLAWALLQHTLTTDDASPAIRKMGNTALQLHVFQYLTKML QGLGSGEHSCTTSTACLCIYSLLCFVLISIDQHTLGNQQDIIDTACQVLTAPNLSELFWN TQSTVGLGVLLDSVCTFFPARLAPLLQLLTALVSSKSTAKRVYTFLDKMSHYTEHYKHKP PDVMSHNDETLWRRRTPKLLYALGQGQTNLRIPQGTVGQVISDDNGFLVRWEYSFSSWTL FTCEVEMLLHVVSTADVIQHCHRVKPIIDLVHKVINTDLSTADYMLPITSRIYMLLQRLT TVMNPPMDFIASCVNCLTVLATRMPAKVWIDLHHTGFLPSAANPISGHIISTEGMSAGGY GTLLGIEQTLGEYSVTISFLRLITTLVKGQLGSTQSQGLVPCIMFVLREMLPNYNRWRYN FNGVRENLGYLMLNLIHAILNLCPDTDQRSSSPSLQTLCIYTLTNTEAGQAIINIMGIGV DTINLVMASQSGSSGTEGQGQMLIQTVKLAFSITNNVIRLKPSSDAVSPLEQALTQHGAH GNNLIAVLAKYIYHKYDPSLPRLAIQLLKRLATVAPMSVYACLGSDAAAIRDAFLNRLQC SIEDMQIKVMTLEFLTVAVETQPGLIELFLNLDVKNKSDGAKEYSLGQWSCLQVVLDLID LQKSDRFWCTPQLHRSAIAFLHALWQDRRDSAMSVLRTKPHFWENLTGPLFGTLVSPSES SDLSVLETCAFIMRILCLEIYYVVRGSLDNSLKSILEKFSKEGRYIYWSNYMHSLMRRVA EMEGSCSSLTEYQMLLSAWRILLIISTHFADVMHLTDARVKKQLFQDILEGAELLFQVPS SVACLDLGSMLCILMIILLRRWKGELSSPDNILKSLGKILEGVLQADERQAVKTKARVFS ALICVLEMKQLKAAKIPQYEQIVLSVCENLQDEVVILVSHTRHEGTSVYGGEDKDSMETE DMPRGKQKDLPDGVCVLALHLAKELCQADEDGDQWLQVTRKLPMLPMIFSALEVSLRVKQ NLHFCEAALHLLFTLAKTHQGAAAIAGSGITQSVCLPLLSVYQQSSNGVSTAQTPLSSRK TLDAPSWPGVYRLTITLMERLLKTLRYNFLTEAFDFVGVHQERILQCLSAVRTVQNLACL EEADHTVGFLLQLSNFIKEWHFHLPQFMKDIQVSLCYLCQSCTSLLYSRKMLQHYLQIKS REAVTSGTASRGQRTPQTPSVQPTPESEALELRVLRSVQHSLLKILSKTLSTLRAFTPDL SQILQPLDLSQYQMLLALNFSTPAFDADVAPSFGTFLATVNVMLNMLGELDKKKVPPSAS SPSEESQNLRPLLLFIIENCFYLLISQALLYLRDPSVNPRDKQRMKQELASELSTLVSSL SRYMRRGVPPSPAAGHLPSPQSKAGTSLKGSPEAQEPIIQLVQVFIRHVQR NT seq 5196 nt NT seq  +upstreamnt  +downstreamnt atggcggcggacgggggtctggacgtgagaagcagtcgggaactatggaccattctactg gggagatcggccatgagggacccaatgcaggtcaaggccgaacttgatcgatatggagga aggtttcttcaaggcttggctttctacaaacttccaagcactggctctgcagacaaggtg aaagctagcaatgcagctcctgcattgaaggaacttggattacgtttaagcaagtttctg ggactggatgaggagcagagtgtgcagctgctgcagtgctacctccaggatgattacaga ggaacccaggactccataaagttggtgccacaagatgaaaggcagagtcaggcactaatg ttaaagatggcagagtattactttgaagacagaatgtgtatgctgcggtgtgttctgcat ttgctgacttattttcaggatgaaaagcacccttataagaaagagtttaacaagtgcatg gatgtgctggagcagggggatctaatcgggaaatatataaaaaaaattgaggagctcagc aaagaagatgcgcctacatgggaaacccatgggaacctcatgactgagcgtcaggtgtcc cgctggttcatgcagtgtctccgagagcaggccatgttgctggagattattttcttgtac tatgcctactttgcaattcctcctgccaatcttctctcgcttactaaactcttcacggag caaggctttggacgtcggcagcaaaaccgccatttggttgaacaaagcttggacgcctta atagacagaattgggtactttgaagttctcatcctcctggaaggaattgacatggactct ttgcaggagtgtgctttaaaggaaaacgccgaacacccactcaacaatgagcatcagatt tgcaaggaaatggatcaaatcctgctgacctttggagacattccacatcacgcgccggtt cttttggcctgggctcttcttcagcacacacttaccacagatgatgcttctccagccatt cgaaagatgggcaacactgctttacagcttcatgttttccagtatctaaccaaaatgctt caaggtcttggtagtggtgagcatagttgtacaaccagtaccgcttgtctgtgcatctac agtcttctctgctttgtgctgatctccatagaccaacacacactgggcaatcagcaggac atcattgatacggcttgtcaagttctgactgcaccaaacctgtcagaacttttttggaat acacagtctactgtaggcctgggagtcttgctggacagcgtgtgcacctttttccctgcc cgcctggcacctcttctccagcttctgactgctcttgtctccagcaagtccacagccaaa agggtgtacacattcctggataagatgtcccattacacagagcattacaagcacaaacct cccgatgtcatgtcgcataacgacgagactctctggaggagacggactccaaagcttcta tatgccttgggacagggacagaccaacttgcgcatacctcaggggacggtcggccaggtg atttctgatgacaatggtttccttgttcgctgggaatactcctttagtagctggacccta tttacctgtgaagttgaaatgctccttcatgtcgtgtccacagcagatgtcatacagcac tgtcacagggtaaagcccatcatagatcttgtgcacaaagttatcaacactgacctgtcc acagctgactatatgctgccgattacatcccgcatttacatgctgttacagaggttaaca actgttatgaacccacctatggatttcattgcctcatgtgtaaactgcctgacagtatta gcaacacgtatgcctgcaaaggtctggatagacttgcatcacacaggattcctgccatct gctgctaatcccatctcaggccacattatcagcactgaaggtatgagtgctggtggctac gggactctacttgggattgagcagactttgggtgaatacagtgtcaccatttctttcctc cgcctcatcaccaccttagtgaagggccagctgggcagtacccaaagccaaggattagtg ccttgcatcatgtttgtgctacgtgagatgcttcctaattacaacaggtggcggtacaac tttaacggagtcagagaaaaccttggttatctgatgctaaatctgattcacgccatcctt aatctctgccccgacacagatcaacgcagcagcagccccagcctgcagaccttatgcatc tacactcttacgaacactgaggcaggacaagccattattaatattatgggaatcggagtt gatacaatcaatctggtcatggcatctcagtctgggagcagtggaacagaaggacaaggc cagatgttaatccagactgttaagctggccttttccatcaccaacaatgtcataagactg aagccgtcctctgatgcggtgtcccctctggagcaggcgctcactcagcatggagctcac gggaacaatcttattgctgtcttggccaaatacatctaccataaatatgatccatctctt ccacggctggctatccaacttctgaaacgactggctactgtggcccccatgtctgtgtat gcctgtctgggaagtgatgcggctgctatccgtgatgcctttttgaaccgcttgcagtgc agtatagaggacatgcagataaaggttatgactctggagttccttaccgtggctgtcgag acccagcctggactcattgagctctttctcaacctggacgttaagaacaagagtgatgga gcaaaggaatacagtttggggcagtggagttgtctgcaggttgttttagatctaattgac ttacagaaatcagaccggttttggtgcactcctcaattacaccgttcagccattgccttc ctgcatgccttatggcaagatcgccgtgacagtgccatgtctgtgctaagaaccaagcca catttttgggagaatttgaccggtcccctctttggaacacttgtctccccttcagagtct tcagatctgagtgtcttggagacttgtgctttcatcatgaggatcctgtgcctggagatt tactacgtagtcaggggatcgttggacaactctctaaagagcattctggagaagttctcc aaggagggacgctatatctactggtcgaattacatgcattctctgatgcgccgtgtagca gagatggagggaagctgcagctcgctgactgaatatcagatgctgctgtctgcctggcgc atactgcttattatttccactcactttgcagatgtcatgcacctgaccgatgcacgcgtg aaaaagcaacttttccaagacattttggagggtgcagaacttctgttccaggttcccagc tcagtggcctgtttggatcttggatctatgttgtgtattttgatgatcattctgctgaga cgctggaagggtgagctcagttcacctgacaacattttgaaatctctggggaaaatcctg gaaggtgtgcttcaggctgatgaacgacaagcggtgaagaccaaagccagagtcttttct gccctgatctgtgtgctggaaatgaagcagctgaaagccgccaagattccccagtatgag caaattgtgctgagcgtttgtgagaatctacaggacgaggtggttattctagtcagtcac acacgccatgaagggacaagtgtttatggaggagaggacaaggacagcatggagactgaa gatatgcctcgaggaaagcaaaaagacctgcctgatggggtttgtgtgttggcgttgcat ttggccaaggagctgtgtcaggcagatgaagatggagaccagtggctacaagtgaccagg aagctgcccatgctgcccatgatcttcagcgctttggaagtcagcctgcgggtcaagcag aacctccatttctgtgaagcggcacttcatctcttgttcacattagctaaaactcaccag ggggcagcagccatagctggatctggcatcactcagagtgtgtgtctgcctctgctgagc gtctaccagcagagttccaatggagtgagcacggcacagacgccgctctcatcccgtaaa actctggatgctccatcatggcctggtgtgtacagattgaccataaccctgatggagagg ctgctgaagactttgcgatacaacttcctaacagaggccttcgattttgtaggagttcac caagagaggatattacagtgcctgagtgcagtgcgtacagtgcaaaatttggcctgtctg gaggaggccgaccatactgtaggttttctgctgcagctttccaacttcatcaaagaatgg catttccacttaccgcagtttatgaaggacattcaggtcagtttatgttatctgtgccag tcgtgcacatccctgttgtacagtcgaaagatgctgcaacattatttacagataaaaagt agggaagcagtgacatccggcacggcctctcgtggtcagcgcactccgcagactccttcc gtgcagccgacacctgagagcgaggccctggagctaagagtattgcgttctgtccagcac agcctcttaaagatcctgagcaagacgctgtctacactgcgagccttcacaccagatctc agccagatcctgcagcctctagacctctcacagtatcagatgctattagccctgaacttc agcaccccagcattcgacgcagatgtggcgccgtcattcgggaccttcctagcaactgtc aatgtgatgctgaatatgttgggagagctggataagaagaaagttccgccctccgcttcc agcccgtcagaagaaagccagaacctcagacctctgctgctatttatcattgagaactgt ttctatctgttgatatcacaagccctgctctatctgcgtgatccatcagtcaacccccgg gacaagcagcgcatgaagcaagagctcgcctcggaattgagcacgctggtgtccagccta tcacggtacatgcgacgcggtgtccctccctctcctgcagctggccacttgccttccccg cagtcaaaggccggaacgtcgttgaagggatctcctgaagcccaggagccaataatccag ctggtccaagtgtttatacggcatgtacagagatag

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