Nanorana parkeri (Xizang Plateau frog): 108801897
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Entry
108801897 CDS
T04897
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A-like
KO
K12821
pre-mRNA-processing factor 40
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108801897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npr03041
]
108801897
Spliceosome [BR:
npr03041
]
Complex A
U1 snRNP components
U1 related factors
108801897
Complex B
108801897
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
RhoGAP-FF1
DUF4936
Tox-REase-5
Motif
Other DBs
NCBI-GeneID:
108801897
NCBI-ProteinID:
XP_018429308
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MASGDGTNGPSQPGLFPNGSRMMRGQFMTPVAHFPGVGLGGLPPRPNLAPPGMIPPLMGP
MGAHQMGQMAPMIPPLLPGMMMPAHVAPGTLPAGLQPGVNSLDPSLAQPPVTQAGHPVIS
APPAISTNTAANEEPSKTKSLWTEHKSPDGRTYYYNIETKQSTWEKPDDMKTPAEQLLSK
CPWKEFKSDSGKPYYYNSQTKESRWAKPKELEDLEGLIKAEESSSVQETTAPAPAPAPIQ
MSTVPVAVEVTSTPTPAPVALAAEAELVMSTPTTPALDCETMVNDSGEEQAHSVSSSIQE
KDPEVSSSGIVEEYAKQEVLVDSASVEEEEEKNPKKTYIWNTKEEAKQAFKELLKEKRVP
STASWEQAMKMVINDPRYSALTKLSEKKQAFNAYKVQTEKEEKEEARLKYKEAKEGYQRF
LENHDKMTSTTRYKKAEQMFSELDVWNAISERDRLEIYEDVMFYLSKKEKEQAKQLRKRN
WEALKNILDNMANVTYCTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEK
EEEEEKQKTLLRERRRQRKNRESFQVFLDELHEHGQLHSMSSWMELYPTVSSDIRFANML
GQPAI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcatctggcgatggtacaaatggaccaagtcagcctggactttttccgaatggatca
cgcatgatgagaggacagtttatgacccctgttgcccatttcccaggcgtgggactgggt
ggcttacctccaagaccaaatctggcaccaccaggcatgatcccacctttgatgggacca
atgggtgctcatcaaatgggacagatggctccaatgattcctcctctcttgcctggaatg
atgatgccagctcatgtggcaccaggcacgttacctgctggcctacagccaggtgtgaac
agcttggatccctcactggctcagccaccagtcacgcaggcaggacatcccgtaatttca
gcaccgccagccatttcgacaaacactgccgctaatgaagagccctctaagacaaaatct
ttgtggacggagcataaatcaccagatggtaggacatattattataatatcgaaaccaag
cagtctacatgggagaaaccagatgatatgaaaaccccagctgagcaattgttatccaaa
tgtccctggaaggagtttaaatctgactctggaaaaccatattactacaattcccagaca
aaggagtctcgctgggccaaaccgaaagagctagaagatctggaagggttaattaaagct
gaagaaagcagcagtgttcaagaaaccacagctccggctcctgctcctgcacccatacaa
atgagcaccgttccagttgctgtagaggtgaccagtacacccacacctgctcctgtggca
ttagctgctgaagcagagcttgtcatgtccacccccacaacacctgcattagactgtgag
actatggtcaatgactctggtgaagagcaagcccattctgtgtcgtcttctattcaagag
aaagatcctgaagtcagcagcagcggcattgtagaggaatatgccaaacaagaggttcta
gtagattcggcttctgttgaagaggaggaagaaaagaatcctaagaagacctatatatgg
aacacaaaggaagaagctaagcaagcgttcaaagaactccttaaagaaaagcgcgtgccg
tccactgcttcctgggaacaagccatgaaaatggtcattaatgatccaagatacagtgca
ctgacaaagctaagtgagaagaaacaggcatttaatgcttacaaggtacagaccgagaaa
gaagagaaggaggaagccaggctaaaatacaaagaggctaaagaaggttaccaaaggttt
ctagaaaaccatgacaagatgacctcgaccacccgatacaaaaaagcagagcagatgttc
tcagagctagatgtctggaatgcaatttctgagcgtgaccgtctggagatttatgaagat
gttatgttctatctttcaaaaaaagaaaaggaacaagccaagcaactcagaaagaggaac
tgggaagctctgaagaatatattggacaatatggccaacgtaacctattgtacaacatgg
tcagaagcacagcagtacctcatggacaaccctacttttgctgaagatgaggaacttcaa
aatatggataaggaagatgccttaatatgttttgaagagcatattcgggctttggaaaaa
gaagaggaggaggagaagcaaaaaactttactaagagaaagacgtcggcaacggaagaat
cgagaatctttccaggtgtttttagatgaattacatgaacatggtcagttacattccatg
tcgtcttggatggagctgtaccctacagtcagttccgacatccgttttgccaacatgctt
ggtcagccagccatctaa
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