Nanorana parkeri (Xizang Plateau frog): 108802828
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Entry
108802828 CDS
T04897
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npr03019
]
108802828 (HELZ)
Messenger RNA biogenesis [BR:
npr03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
108802828 (HELZ)
3'-5' decay
Other 3'-5' decay factors
108802828 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
zf-CCCH
AAA_30
AAA_19
ResIII
UvrD-helicase
PAM2
PhoH
zf_CCCH_4
AAA_22
zf-CCCH_4
Mov-10_helical
AAA_16
AAA_7
Helicase_RecD
AAA_5
MULE
Motif
Other DBs
NCBI-GeneID:
108802828
NCBI-ProteinID:
XP_018430182
LinkDB
All DBs
Position
Unknown
AA seq
1931 aa
AA seq
DB search
MADRRLAHPCEQACDSFRRLDYESAVQHCTECLLSLSHYKSTHPTKANSTHIIHIKIESL
LYRLASFLQLKNYDKADEDCKLVLGAGRTQPDASVHAVLCCLHLEGKLQIVASVLSKTLI
GEPLNGMVTKDLSRLKTLLAEIENVSSSVRSGYQTEDLEDGTQEGWRYRPPPRGVTSSEE
YTLCKRFLEQGICRYGAQCTSAHSQEELEEWQKRYASRLIRLKQQKENTQCSGSYMESLI
EKWMNSLSPEKVLSECVDGVQVEYSRDLSVTVTTKKSQQTWTFQLTCKPARILHRAALLY
DAHRPHFSIAAICAGDGNTQMSQEVPESCQEWVGENLTQNGTDHCVYKVIINFSTEIFGT
FRQTVVFDFGEEPVLMQRIMVDAASTEDFEYLMQARQQLLTTAKRWDSMSKTIVEFEPNE
TTELERSLLSRYQIPLSADQLFTQSVLDKCLTKSNYQSRLHDLLYIEEIAQYKEVSKFNI
KVALQLVASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNSVFVLPVS
KDKSPQSQGSKERVFEAVIEEKTKDYIFLRICKDCCDELRLRADREMQVELQFQLNRQPL
CEMHYALDRIRDNGILFPEISATPPIPWSPNRQWDELLDPRLNAKQKEAILAISTPLSIQ
LPPILIIGPYGTGKTFTLAQAVKQILKQQETRVLICTHSNSAADLYIKDYLHPYVETGNP
QARPLRVYFRNRWVKTVHPVVHQYCLISSTHATFQMPQKEDIMRHRVVVVTLSTSQYLCQ
LDLEPGFFTHILLDEAAQAMECETIMPLALAHKNTRIVLAGDHMQLSPFVYSEFARERNL
HVSLLDRLYEHYPADFPCRILLCENYRSHEAIINYTSDLFYEGKLMASGKQPAHKDFYPL
TFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQV
FRIRAELRKKRLSEVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKRKEQLLEDST
EDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWEQFITICHENRSLHGI
TFEQIKAQLEALELKKTYVLNPLAPEFIPRALRQQHSANAGKHQQSPPKGKGHHNQNEHF
QGEAMVQPNPSVLIGNPIRAYTPPMGPHTNLGKSPSPVQRIDPHTGTSILYVPAVYGGNM
VMSVPLPVPWPPNYQSRFSVDPRLMTHPAMAYNMNLLQGHGRGSPIPFGLGHHSPVNVGQ
QMQHTDKDQHELNRNGKNENSPSSDMNKLRTPEKKPLECKGGDLDPNGQSRSPESRANLG
FPNPKFHRKDNPNQRPVNIHLTPPHPQYPMPNRPFPHMSALPRPQFPLQQQQNLLPQQQN
HLSELQNQIPPPPSPQAPVLPQHNHLIQQAPQQTPQLSPAYQPGQSFFNTAMPHRPPSPI
MDGMVQEQPPPQMLQDVNNPLRSMSQNNPLMSSHINSYMEEAPPPMAAGEALDRIHSNVA
LETLRQQQSRIQQWNEHNAYLSQANLPFPHHHHHMQAMGLAHQQLVRPSWKIPSGGEEET
EITYSRFQEFLRELSQHDPSDGRDLPEMPPPQSRLLQYRQVQPRSPPSLSSPSSNHSGHF
PTFTDNSRDMDMTNNPAFPQHMASVYNSPYTLPSDHMTPPPPMKYLQHDGSWAYANLQQN
PLMGQGFHYGLPPLQHRPPQNPFIHIPNHQPPAGPEAFQPPAPRAVSTTSLHNLEEYEPR
GPGRPLYQRRISATAAHAGPDELAACPENLGKEIPDPNKPASYSYSSPELWVNAASSAPF
QNIPCNGANQSGTPRDMLVTAQKMSKPPDEHLKAENMQMANSFNYNVLQHLGQFPPLMPN
KQMAEPNGGGAVQQGPGASKPTMSYASALRAPPKPKPPPEQAKKNSDPLSLFQELSLGSS
SGSNGFYSYFK
NT seq
5796 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagaagactggcccatccctgtgaacaagcatgtgactcctttagaagactt
gattatgaatcggcggttcagcattgcacagagtgtctcctgtctctcagtcactacaag
agcacgcaccccaccaaggccaactccactcacatcatccacatcaagattgagagcctg
ctctacagactcgcctctttcctacagctgaaaaattatgacaaggcggacgaggactgt
aaattggttcttggcgccggccggacccagccggacgcctctgttcacgctgtactttgc
tgtttgcacctggaaggaaagctgcagatcgtggccagcgtattgtccaaaacactcatc
ggagagcctctgaatgggatggtaaccaaagatctgtcccgattaaaaacattacttgcg
gaaatagagaatgtcagtagcagcgtccgcagtggttaccagacggaggatttggaagat
ggaactcaggagggatggcgctatcgaccaccaccgcggggcgttacaagcagcgaggag
tatactctatgtaaaaggttcctggagcagggaatatgtcggtacggagcgcagtgtaca
tcggcgcactcccaggaggagctggaggaatggcagaagcggtacgcctcgcgcctcatc
cgcctcaagcagcagaaagaaaacacacaatgttctggcagctacatggagtctctgatc
gagaaatggatgaattccttgtcacccgagaaagtgctcagcgagtgtgtagatggagtc
caagtggagtacagccgagatctgtctgtcacggtcaccaccaaaaaatcacagcagacc
tggacgtttcaactaacatgtaagcctgcgagaatcctccaccgggcggccctgctgtac
gatgcacacagacctcatttcagcattgcggcaatatgcgccggagacggcaacacccag
atgtcccaggaggtgccggagagctgccaggagtgggtgggcgagaacctgacgcaaaac
gggaccgatcattgtgtgtacaaagttatcatcaacttctccactgaaatatttgggacc
ttccggcaaactgtagtgttcgacttcggagaggaaccagtgctgatgcagaggatcatg
gtggacgccgcttcaactgaagactttgaatacttgatgcaagcccgtcagcagctgcta
acgacggcgaaacgttgggactccatgtcgaaaaccatcgtagagtttgagcctaatgaa
actactgaacttgagaggagccttctcagccgataccaaatcccgctctccgcagaccaa
ctgtttacccagtctgtgctggacaaatgcctgactaagtccaattaccagtcccgcctg
cacgacctgctttatatcgaggagattgcacagtacaaggaagtcagcaagtttaacatc
aaagtggcgctgcagttggtggcaagcttcatgctgacgggcgtgtccggaggggcaaaa
tatgcccagaacgggcagctgtttgggcgctttaaactcactgagacactttctgaagac
actttggctggcagactggtcatgaccaaagtgaactccgtgtttgtgttgccggtctcg
aaggacaaatctccgcagagccagggcagcaaagagagggtctttgaggccgtcatcgag
gagaaaaccaaggactacatcttcctgagaatatgcaaggattgttgtgatgagctgcgg
cttcgagccgaccgggagatgcaggtggagctgcagttccagctaaaccggcagccattg
tgtgaaatgcattacgccttggatcgaatacgggataatggtattctcttcccagaaatc
agcgccacaccccccataccatggagccctaacaggcagtgggatgaactgttagatccg
agactgaatgcaaagcagaaggaagccattttggccatcagtacgcccctgtccatacaa
ctgccacccattttaatcatcggcccttatggaacaggcaagaccttcaccctggctcag
gctgtgaagcaaattctcaagcagcaggagaccagggttctaatttgcacccattctaat
agtgctgctgacctctacattaaggactatctccacccatatgtagaaacagggaatccc
caggctaggccgctcagggtatatttcagaaaccgctgggtgaagacggtgcacccggtg
gtccatcagtactgtctcatctccagtacacatgccaccttccagatgccacagaaggaa
gacatcatgcggcacagggtggtggttgtaacactcagcacctcccagtacctgtgccag
ctggatctggaacctggtttttttacacacatccttttagatgaagcagcacaagcaatg
gagtgtgaaaccatcatgcctttggctttggcccacaaaaacactcgtattgtcctggcg
ggggatcacatgcagctcagcccatttgtctacagtgaatttgccagggagcgcaatctt
cacgtgtccttgctggaccgtctgtatgaacattaccctgcagactttccttgtcgcatc
ctgctctgtgaaaactaccgctcccatgaagccattatcaattacacatctgaccttttc
tacgagggaaagctaatggccagcggcaagcagcctgcccacaaagacttctatccgctc
accttcttcactgcccgaggagaggacgtccaggagaagaacagcacggctttctacaac
aatgctgaggtgtttgaggtggttgagcgtgtggaggagttgcggcggaagtggccagtg
gcgtgggggaagctggatgacggcagcattggtgtggtaacgccatacgcagatcaggtg
tttcggatccgagctgaactgcgcaagaaacgcttgtcggaagtcagtgtggagagagtc
ctgaacgtccaggggaagcagttccgggtcttgttcctgagcacagtgaggacccggcac
acctgcaaacacaagcagacccccatcaaacgcaaagagcagctgctggaggattccacc
gaagacctggactacggcttcctgtccaactacaaactcctgaacaccgccatcactcgg
gcccagtccctggtggctgtggtgggagaccccatcgcgttgtgctccatcggaagatgc
aggaaattttgggagcagttcatcacaatttgccatgagaacagaagtttacacggtatc
acgtttgaacagatcaaagcccagctcgaggccttagagctgaagaagacctatgtactg
aacccactggcaccagaattcatcccacgggcgctcagacagcagcactcggccaatgcc
ggcaaacatcaacagtctcctccaaagggcaaaggtcatcataatcagaatgagcacttc
caaggcgaggcaatggttcagcccaacccatctgtgctgataggcaaccctatccgggcg
tacacccctccaatgggtccacacaccaacctggggaaatccccgagccccgtgcagaga
atagatcctcacaccggtaccagtatcctctacgtcccagctgtctacggggggaatatg
gtgatgtccgttcctttacctgttccatggccacccaactaccagagccgcttctcagtc
gacccccggcttatgacccacccagctatggcatacaacatgaacctgctacaaggccac
ggccggggttcccccattccttttggtctcggccatcactcgcctgtcaacgtcgggcaa
cagatgcagcacacggacaaggatcagcacgaactcaaccgcaatggtaagaatgaaaac
agcccgtcatctgatatgaataagctgcgaaccccagagaagaagccattggaatgtaaa
gggggggacttggacccaaatggacaatccaggagccccgagtctcgagccaatcttggt
ttccctaaccctaaatttcaccgtaaagataacccaaaccagaggccagtcaacattcac
ttgacgcctcctcaccctcaataccccatgcctaatcgccctttcccgcatatgtctgca
ctgcctaggccgcagttccctctacagcagcagcagaaccttctcccacaacagcagaac
cacctgtcggagctacagaaccaaattcctccccctccctccccgcaggcccccgtcctt
ccccagcacaaccatttaatccagcaagctccacagcagaccccacagctctctccagcc
taccagccaggccagtccttcttcaacaccgccatgccgcaccggccaccatcgcccatt
atggacggtatggttcaagaacagccgcctcctcagatgcttcaggacgtcaataacccc
ctccgctccatgtcccaaaacaaccccctcatgtcctcccacatcaacagctacatggag
gaagcacctccacctatggcagccggggaagcattagatcgtatacacagcaatgtggcg
ctggagaccctgaggcagcaacagtctcggatacagcaatggaatgaacacaatgcttat
ctgagccaagccaatctgccattccctcaccaccaccaccacatgcaggccatgggcctg
gcccatcagcagcttgtccgacccagctggaagatacccagtggaggagaagaggagacg
gagatcacctactctaggtttcaggagtttctgcgggaactgtcccagcacgatccaagc
gacggcagagatctcccggagatgccccctcctcagtctagactgttacagtacagacag
gtccagccacggagcccaccatcgctctcctccccatcctccaaccacagcggtcacttt
cccaccttcaccgacaacagccgagacatggacatgaccaacaaccccgccttcccccaa
cacatggccagcgtctacaacagcccctacaccctgccttcagatcacatgaccccccct
ccacctatgaaatacctgcagcacgacggctcttgggcctacgccaacctacagcagaac
cctctcatgggccagggctttcattacggcctgccccccctacagcaccggccgccgcag
aacccgttcatccatattcccaaccatcagccgccagctggaccagaagcatttcagcca
cctgccccccgcgccgtgtccaccacatcactccacaatctagaagagtatgaaccacga
ggacccggcaggccactgtaccaaagaagaatctcggccaccgcggcgcacgcaggtccc
gacgaattggccgcttgtcctgaaaatctcggtaaagaaatcccggacccaaacaagcca
gcgtcctacagctattcatctccagagctctgggtcaatgctgcgtcctccgccccgttc
cagaacattccgtgtaacggggccaaccagtctggaacaccacgggacatgctagttacc
gcgcagaaaatgtccaagcctccagacgagcatctcaaagcggagaacatgcagatggcc
aactccttcaactacaacgtcctgcagcacctgggccagttcccgcccctcatgcccaac
aagcagatggcagagcccaacgggggcggagctgtccagcagggtccgggcgccagcaaa
cccaccatgtcctacgcaagtgccctgcgcgccccccccaaacccaaaccccccccagag
caggcaaaaaagaatagcgaccccctgtctttatttcaggaactcagcttaggcagttca
tcaggtagcaatggtttctattcctattttaagtag
DBGET
integrated database retrieval system
