Nanorana parkeri (Xizang Plateau frog): 108803224
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Entry
108803224 CDS
T04897
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup98-Nup96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108803224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npr03019
]
108803224
03036 Chromosome and associated proteins [BR:
npr03036
]
108803224
Messenger RNA biogenesis [BR:
npr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108803224
Chromosome and associated proteins [BR:
npr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108803224
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nup98_GLEBS
Nucleoporin2
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
108803224
NCBI-ProteinID:
XP_018430567
LinkDB
All DBs
Position
Unknown
AA seq
1354 aa
AA seq
DB search
TGFGSTQTTGFGTSAFGTNNSGGLFGNTQNKPGGLFGTGTFSQPAASSTSSAFGFGAAAG
TTNALFGSTNTGGAAGGGGGLFSSQNNAFGQTKPSTFGTFGTSTSSGGLFGNTNTTANPF
GATASNLFGGSTFAAAPSGTTIKFNPPSGTDTMAKGGVTTNINTKHQCITAMKEYESKCL
EELRLEDYQSNRKGPQNPVGAATAAGLFGAPTAAASATTGLFGSTPASNTFSFGNKNAFG
QSTGTFGANTGGLFGQTAAQPATSLFNNKPFGTATTTPNTAFSFGSANTLGQPQASTMGL
FGSTQATQAAGLFGGTATNTNAASAFGTGTSLFGQTTTTPFGGVGGSLFNNNKPAAFGTA
TTSAPAFGTATGGLFGGFGSGTAGTGLFGNKNAPGTLGAGLGTAFGPALNTGQTSIFGGN
QAKMGTLGTGTFGTAGFNTAGGGLGFGGTQAPVALSDPNAAAAQQLALQQQINALAYSPY
GDSPLFRNLIDDPKKKEERLKPTNPAAQKALATPTHYKLTPRPAARVRPKALHAAGTAKS
QLFDGLDDDEPLMTGGAFMPKYRRSVAPARSVIPGANRPPVPASGAPALRGIVESLPPSS
SCVERIWLLGLVPFVLQSGSSDNHGGVEEDQDEEVSTFYPSPLSKPLPSSQDKHLDSMDD
TIVALNMRPGVRSGLDLGVDENSRNEDPPLPGAAEVTLNEVWPINKTTRELIKSPEQLSE
MNYKSKLEAASRKQGAQFKEYRPETGSWVFRVKHFSKYGLQDSDEEEEGSTSTAENKIKS
AALPPPGQAPPPAPAALDGGLTPPPQSTMLELLGHGLELDSDMADVTQEHFKETTVEEME
NAEEQETVSASMHIASALGVNPHALQVMKAALQIEEDGGGDRLTRFSHYPSLLETSQEVR
SPRLLHPSSQAQRTSSVGGLLQSRFTGSTLLKQSESGQSPRPSPGAPWPGLGLLAPSFLM
PAPAPDAQLKTVGTRRQQGLVPSGKSVCFGRGKMLIDMGLFMGRSFRVGWGPNWTLSHSG
GIITEPGTTEKAGRMENMDYGFLPKPVTTKSFAESSFKVHVQKLSLEEKGRDLHSYLIPL
EIELKNSTVQPDPCPLLLPNPGAASIHXDWVSLSCTAVVKQWCLTWTMCRALWGQLRDLE
ASLDETNEYVERLHRRKAFSHWLAETAAERIESEVVIHQKERPIEAVFSSLTGCCISEAC
RLAQRSGDHRLSLMLSQLVGNQQLQELMTVQLEDWQTQQVDRFIQEERLKVYVLLSGTAV
WQSSDKKSINVCSQLDWKRALAVHLWYMLPPTASIAQALQKYEDAFQVSDEGQCYASYPL
PSYLEDTDLTMDSETFSPSIQRDVCFHLLKLYSD
NT seq
4066 nt
NT seq
+upstream
nt +downstream
nt
atactggttttggcagtacacagaccaccggttttggaacgtcggcattcggaacaaaca
acagtggcggcttgtttggaaacacgcaaaataaacccggtggactctttggtaccggca
cattcagccagccagccgcctcctccaccagctcggcgttcggtttcggagcagcggccg
gtacaacaaacgccttgttcggatcgacgaataccggaggagcagcagggggagggggag
gtctcttctcatcccagaacaatgcctttggacagacaaagccttcgacttttggcacat
ttgggacgagcacaagcagtggaggactcttcgggaacacgaataccaccgccaacccct
ttggtgccaccgccagtaacctgtttggaggctccacgtttgctgcagctccctctggaa
cgaccatcaaattcaatcctccatcggggacggacaccatggccaagggcggagtcacca
ccaacatcaacaccaaacatcaatgtataacggccatgaaggagtacgagagcaagtgcc
tggaggagctgcgtctggaagattaccagtccaatagaaaggggccccaaaatcccgtgg
gagcggccacagccgccggtttgtttggcgccccaactgctgctgccagcgcaaccacgg
gcctattcgggtccacgccggccagcaacaccttctccttcggaaataagaatgccttcg
gacagagcaccggcacatttggagccaacaccggaggtctctttggccagactgccgctc
agccggccaccagcctgttcaacaacaagccatttggaacggcaactacaacccccaaca
cggccttctcctttggaagcgccaacacgttgggtcagcctcaggccagcaccatgggtc
tgtttggcagcacgcaggctacgcaggccgcaggcttatttggcggcaccgccaccaaca
ccaatgccgcctcagcctttggcactggaaccagtttgtttggacagacgaccaccactc
cgtttgggggtgttgggggcagcttgttcaacaacaacaaacctgctgcttttgggacgg
caacgaccagcgccccggcttttggcacagccactggcggcctgtttgggggattcgggt
ccggcaccgcagggaccggcctttttggcaataagaacgcacctgggacactcggggcag
gattgggcacggcattcggacccgctctgaacaccgggcagacctcaatattcggaggca
accaggcaaaaatgggcacactcggcaccggcacattcggcaccgctgggtttaacacgg
ccgggggcggcttgggattcggtggtactcaggcccctgtcgctctgagtgaccccaatg
cagcggctgcccagcaattggctctccagcagcaaatcaatgccctggcctactctccat
acggggactcccctctcttcagaaacctcatagatgaccccaagaagaaggaggagcgtc
tgaagccgaccaatcccgcggctcagaaggcgctcgccaccccgacgcattacaagctga
ccccgcgtcctgccgccagggtgcgccccaaagccctccacgcggccgggaccgccaagt
cgcagctcttcgatggattggatgacgacgaacctctgatgacgggaggagctttcatgc
ccaagtaccgacgttctgtggcccctgccagatcggttataccaggggccaatcgtccac
ccgtcccggcttctggagccccggctctgagaggcattgtggagtctctacctccctcat
catcgtgcgtggaacgcatctggttgctgggcctcgttccgttcgttcttcagtcggggt
ccagtgacaaccacggaggagtggaggaagatcaggatgaggaggtgtccaccttctacc
cgtctccattatccaagcctctgccctccagccaggacaagcacctggacagcatggacg
acaccatcgtggccctgaacatgcggccgggcgtgaggagcgggctggacctcggcgtgg
atgagaactcccgcaatgaagatcccccccttccaggggcagccgaggtgacgctgaatg
aagtttggccgatcaataagacgactcgagagctgatcaagagccccgagcagttgtctg
agatgaactacaaaagcaagctggaggccgcttcccgcaagcagggggcccagttcaagg
agtaccgtcccgagaccggatcctgggtcttccgggtgaagcatttctccaagtacggtc
tgcaggactcggacgaggaagaagaaggctccacctccacggcagaaaataagatcaaat
ctgcagctctgccgccccccggacaagcaccgcccccagcaccggccgccctggatggag
gactcacccctccgccacagagcacaatgctggagctgctgggacatggactggagctgg
acagcgacatggcggatgtgacgcaggagcacttcaaggaaactacggtggaggaaatgg
agaatgcggaggagcaggaaacggtgtctgcctccatgcacatcgcctccgccctcggtg
tcaacccccatgccctgcaggtgatgaaggcggctcttcagattgaggaagatggcggcg
gtgatcgcctgacgcgtttttcccattacccgtcattactggagacctcccaggaagtgc
gctccccgcgactcctccacccctcctcgcaggcccagcggacctccagcgtggggggtc
ttctgcagtcccgcttcacggggtccacattactcaagcagagcgagtccggccaaagtc
cccgcccctctccgggggccccgtggcccggcctcggccttctggccccttccttcttaa
tgccggctcctgctccagacgcgcagctgaagacggtggggacccggagacagcaaggcc
tggtaccgtcagggaagtccgtgtgctttgggcgtggcaaaatgctgattgacatgggtc
tgtttatgggccgctcattccgtgttggctgggggcccaattggaccttgtctcacagtg
gcggtatcatcaccgagcccggcaccaccgagaaggctggaagaatggagaacatggact
acggcttcctgcccaaacccgtcaccaccaaatcgtttgcggagtcctcctttaaggttc
acgtgcagaagctgagtttggaggagaaggggagagatcttcattcctatctgataccat
tggagatcgagctgaagaacagcaccgtgcagcccgatccgtgtcccctcctcctaccca
accccggcgctgcctccattcatnttgattgggtgtctctctcctgcacagcggtggtga
agcagtggtgcctgacgtggaccatgtgcagggcattgtgggggcagctgcgggacctgg
aggctagcctggatgagaccaatgagtacgtggagagattacatcggaggaaggctttct
ctcattggttggctgagacggcggccgagcgaatcgagtcggaggttgtcattcaccaga
aggaacgtcccattgaggccgtcttcagctccctgaccggctgctgcatcagtgaagcgt
gtcggctggcgcagagatctggtgaccatcggctctccctcatgttgtcgcagttggtgg
gaaatcagcagcttcaggaactgatgaccgttcagctggaggactggcagacgcagcagg
tggaccgcttcatccaggaggagaggctgaaggtctacgtgctgttatctggcactgccg
tatggcaatcatcggataagaagtccatcaatgtttgctcacagctggactggaagcgtg
cgttggctgtgcacctctggtacatgctcccgcccactgcgtctatcgcccaggcgctgc
aaaaatacgaggacgctttccaggtgtctgatgagggtcagtgctatgcgtcctatcccc
tcccttcatatctggaagatacggacctcactatggactccgaaaccttctccccgtcca
tccagagagacgtctgcttccaccttctcaagctctacagcgacag
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