KEGG   Nanorana parkeri (Xizang Plateau frog): 108804869
Entry
108804869         CDS       T04897                                 
Symbol
CACNA1S
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1S
  KO
K04857  voltage-dependent calcium channel L type alpha-1S
Organism
npr  Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04010  MAPK signaling pathway
npr04020  Calcium signaling pathway
npr04260  Cardiac muscle contraction
npr04261  Adrenergic signaling in cardiomyocytes
npr04270  Vascular smooth muscle contraction
npr04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:npr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    108804869 (CACNA1S)
   04020 Calcium signaling pathway
    108804869 (CACNA1S)
 09150 Organismal Systems
  09152 Endocrine system
   04912 GnRH signaling pathway
    108804869 (CACNA1S)
  09153 Circulatory system
   04260 Cardiac muscle contraction
    108804869 (CACNA1S)
   04261 Adrenergic signaling in cardiomyocytes
    108804869 (CACNA1S)
   04270 Vascular smooth muscle contraction
    108804869 (CACNA1S)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:npr04040]
    108804869 (CACNA1S)
Ion channels [BR:npr04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   108804869 (CACNA1S)
SSDB
Motif
Pfam: Ion_trans GPHH Ca_chan_IQ PKD_channel PRIMA1 DUF2670
Other DBs
NCBI-GeneID: 108804869
NCBI-ProteinID: XP_018432281
LinkDB
Position
Unknown
AA seq 1688 aa
MDARGAGVEEGAQKKKRRPLVPPSPRPPRALFCLGLQNPFRKACINIVEWKPFEMIILLT
IFGNCVALAVFLPMPEDDTNSTNSILEKIEYIFLFIFTIEASLKIVAYGLILHTDAYLRN
GWNVLDFTIVSVGVFSVVLEQIHKLQGITAPGKSSGFNVKALRAFRVLRPLRLVSGVPSL
QVVLNSITKAMLPLLHIALLVLFMIIIYAIVGLELFSGKMHKTCYFKLTDIIATVENEKP
APCSSIGQGRQCSINGTECRGWWPGPNNGITHFDNFGFAMLTVYQCITMEGWTEVLYWVN
DAIGNEWPWIYFVSLILLGSFFVLNLVLGVLSGEFTKEREKAKSRGAFQMLREQQEMDED
LRGYLDWITHAEVMDSDMEPGDGFSKLEEGGSETDSLYEIEGINKCIAFFRQWRHWHRLL
RRKSRELVKSRLFYWLVIIIILVNTIIIATEHHNQPHSLTRAQDITNQVLLALFTMEMVI
KIYALGFQSYFMSIFNRFDCFVVCTGLLEVMLVASDIMSPLGISVLRCIRLLRIFKITRY
WTSLNNLVVSLLNSVRSIASLLLLLFLFMIIFALLGMQMFGGKFDFEDIEIRRSTFDTFP
QSLITVFQILTGEDWNTVMYNGIMAYGGPSFPGMSVCIYFIILFVCGNYILLNVFLAIAV
DNLAEAENLTSAQKAKSEERKRKKLARAYPDKSEEEKLLLAKKLEQKAKGEGIPTTAKLK
IDEFESNVNEIKDPYPSADFPGDDEEEEPEIPISPRPRPLAELQLKEKAVPMPEASSFFI
FSPTNKIRVLCHRIVNATTFTNFILLFILLSSISLAAEDPIRPDSFRNKILSYFDYVFTA
IFTTEIVLKMTTYGAFLHKGSFCRNYFNILDLLVVGVSLISMGIESSAISVVKILRVLRV
LRPLRAINRAKGLKHVVQCVFVAIKTIGNIVLVTTLLQFMFSCIGVQLFKGKFYSCTDTT
KMTAEECRGYFFVAKDGNPAHMEAVPRVWSHSEFHFDNVLSGMMSLFTISTFEGWPELLY
RAIDSHTEDMGPIYNYRIEIAIFFIIYIILIAFFMMNIFVGFVIVTFQEQGEQEYKNCEL
NKNQRQCVQYALKARPLRRYIPKNQYQYKIWYVVTSSYFEYLMFFLITLNTISLGMKHYG
QTAEFSHLADIFNVVFTGIFTVEMLLKLAAFKAKGYFGDPWNVFDFLIVIGSLIDVILSE
IDTPAMPMPDDESGRISITFFRLFRVLRLVKLLSRGEGVRTLLWTFIKSFQALPYVALLI
VMLFFIYAVIGMQVFGKIAMVDGTQINRNSNFQTFPQAVLLLFRCATGEAWQEILLACSY
GKLCDPESDFLPGEEYTCGTSFAYYYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSIL
GPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKFCPHRVACKRLVSMNMP
LNSDGTVTFNATLFSLVRTALKIKTEGNFEQSNEELRMIIKKIWKRTSMKLLDQVIPPIG
DDEVTVGKFYAIFLIQEHFRKFKKRQEEYYGYRPKKSANNVEIQAGLRTVEEEEGGGELH
RAISGDLTPEEELERAMVEAAIEEGIYRRTGGLFGQEDSFHAEPVSPLQTTFTSQRPLRF
SEAGSEDLDSPVFLPDPVFFPPPRRNRNTNNSTISRGLDQRPTTPDFERVLQGEEQWDSN
STISQTTN
NT seq 5067 nt   +upstreamnt  +downstreamnt
atggatgcaagaggagcaggagtagaggagggtgcacagaagaaaaaaaggagaccttta
gtgccaccatccccacgtcctcctcgagcattattctgccttggacttcaaaacccattt
aggaaagcttgtataaacattgtggaatggaaacctttcgagatgattattcttcttacc
atttttggcaactgtgtggctttagcagttttcttgccgatgccagaggatgacaccaat
tccaccaattctatcttggagaagattgagtatatcttcctatttatatttactattgaa
gcaagtttgaagattgtagcctacggattaatattacatacggatgcttaccttcgaaat
ggctggaatgttctagatttcactattgtttctgtaggagtcttcagtgtggtcctggaa
cagattcataaactacagggcataactgccccaggaaaaagttctggatttaatgtcaag
gcactgagagcttttcgtgtcctgagaccgctgcgtctggtgtctggggtacctagcctt
caagtggtactgaattctatcactaaggcaatgctacctcttctacacatagctcttctt
gtgcttttcatgattattatatatgccattgttggactagagttgttttctgggaagatg
cacaagacctgttatttcaaattaacagatataatagcaacagtggaaaatgagaaacct
gctccatgcagtagtataggccaaggccgccagtgctcaataaatggaacagagtgcaga
ggatggtggcctgggccaaataatggcattactcattttgacaattttggttttgccatg
ttgactgtataccaatgcataactatggaaggatggacagaagtactttattgggttaat
gatgctattggcaatgagtggccctggatttactttgtcagccttatccttcttggatcc
ttctttgtgcttaacttagtgctcggagtcctgagcggtgagtttactaaggagcgtgaa
aaagccaaatcacggggagcattccagatgctgagagaacagcaggaaatggatgaggac
ttgcgtggttatttggactggattacgcatgcagaggttatggattcagatatggaacca
ggagatggtttctcaaagctagaggaaggtggttcagaaaccgacagtctgtatgaaata
gaggggatcaacaaatgtattgcctttttccgccagtggcgccattggcatagactgctt
cgtcgaaaaagtcgagaactcgtgaaatcccgcctcttctattggcttgttattattata
attcttgttaacactatcatcatagcaactgaacaccacaatcagcctcactctctaaca
agagcccaagacatcacgaatcaggtgctgctagcgctcttcaccatggagatggttata
aaaatatatgcccttggtttccagtcatattttatgtcaattttcaaccggtttgattgc
ttcgtagtgtgcacaggactgcttgaggttatgctggtagccagtgatatcatgtctcct
cttggaatatctgtcctgcgttgtatacggctactacgaatattcaagattacacgatac
tggacgtcactaaacaacctggtggtttctttgttaaactctgtccgctccatagcatcc
cttctcctcctacttttcctcttcatgattatttttgctctccttgggatgcaaatgttt
ggtggaaagtttgactttgaagacattgaaattaggaggagcacctttgacacttttcca
caatcccttatcactgtctttcagatcttgactggagaggactggaacactgtgatgtat
aatggaatcatggcttatggtggcccatccttccctgggatgtctgtctgcatttacttt
attatcttatttgtttgtggaaattacatcttactgaatgtatttcttgctattgctgtt
gataaccttgcagaggctgaaaatctcacttctgcgcagaaagcgaaatctgaggaacgg
aaacgcaagaaattggcaagggcatatccagataaatcagaggaagaaaaactgctctta
gcaaagaaattagaacaaaaagccaaaggggaaggcatacctactacagccaagttaaag
atagatgaatttgagtctaatgtcaatgaaataaaggatccttatccctctgcagatttc
ccaggtgacgatgaggaggaagaaccagaaatcccaataagtcctcgccctcgccctctt
gcagagctacagttaaaagaaaaggcggtgccaatgccagaggccagctctttctttatt
tttagccccaccaacaaaatcagagtactctgccatcgtattgtcaatgccaccaccttc
accaatttcatcctgctctttatcttactaagtagcatctctttggctgctgaggacccc
attcgaccggactctttccgtaacaagattctttcttattttgattatgttttcactgcg
attttcacaactgaaattgttcttaagatgacaacatatggtgccttcctacacaaaggt
tccttctgcagaaattattttaatattctggaccttttggtggttggagtttccctcatc
tcaatgggcattgaatcaagcgctatctctgtagtcaagattctcagggtattgagagtt
ttgcgtcccctccgagccataaatcgcgcaaaaggtcttaagcatgtggtccagtgtgta
tttgttgccattaaaaccatcgggaacattgtcctggtcacgacacttctgcagtttatg
ttctcttgcatcggtgtgcagctgttcaagggtaaattctacagctgtactgatacaacc
aaaatgacagcggaagaatgcagaggatatttttttgtggcaaaggatggaaatccagcc
catatggaggcagtacccagagtatggtcacatagtgaatttcattttgataacgtcctt
tctggcatgatgtctcttttcacaatttccacctttgaaggctggccagagttactgtac
agagctatagactcgcacactgaggatatgggacctatctataattaccgcatagaaatt
gcaattttcttcattatctatatcatcctaattgccttcttcatgatgaacatctttgtc
ggatttgtcattgtcaccttccaggaacaaggagagcaggaatataagaactgtgaacta
aacaaaaatcagagacagtgtgtgcaatatgccctgaaagcccgtcccttgcggcggtac
atcccaaaaaatcaataccaatataagatatggtatgtagtgacctcatcatatttcgag
tacttgatgtttttccttattactctgaataccatcagtcttggcatgaagcactatgga
cagactgcagagttcagtcatctggctgacattttcaatgtggtctttactggaatcttt
acagtagaaatgttgctcaagctagcagcatttaaagcaaagggttactttggagacccc
tggaatgtctttgatttcctaattgttataggaagcttaattgatgtaattctgagtgag
attgataccccagctatgcctatgccggatgatgaatccggacgaatttcaattactttc
tttcggctgttccgtgttctgcgtttggtgaagttattgagtcgtggagagggagtcagg
actctgctctggacctttataaaatccttccaggcacttccatatgtagcccttctcatt
gtaatgcttttcttcatctatgcagtcattggaatgcaggtttttggtaaaattgcaatg
gttgatggaacacaaataaatcggaacagcaatttccagacgttcccgcaggctgtgttg
ttactttttagatgtgccaccggagaggcctggcaagagatcttgttggcttgttcctat
ggaaagctgtgtgatccagagtcggattttctgccaggcgaggaatacacatgcggaaca
agttttgcatactactactttatcagtttctatatgttgtgtgcttttctgattatcaat
ctctttgttgctgttatcatggataactttgattaccttacccgagattggtcaattctg
ggtccacatcatttggatgagtttaaaaggatttgggccgagtatgaccctgaagcaaaa
ggaagaatcaaacatttagatgttgttactcttctaagaagaatccagccacctctggga
tttggaaaattctgcccccacagagtggcttgtaagagattggtcagtatgaacatgcca
ttgaatagtgatggcacagtcaccttcaatgccactttattttcactggtgaggacagca
ctgaaaatcaaaactgaaggtaactttgaacagagtaatgaagagctccggatgatcata
aagaagatttggaaaaggaccagcatgaagctactggaccaggttattccaccgattgga
gatgatgaggtgactgttggtaagttttatgccatcttcctgatacaagaacattttcga
aagttcaagaaacgtcaggaagaatattatggatacaggcctaaaaaaagtgcaaataat
gtggagattcaggctggtttgcgtacagtagaagaagaggaaggagggggtgaactacac
cgtgccatttctggagatctgaccccagaggaagaattggaaagggctatggtagaggca
gccattgaagaaggcatttatcgaaggactggtgggctatttgggcaggaagacagtttc
catgctgaacctgtcagccctctgcaaacaacatttactagccaacgacctttaagattt
tcagaagctggaagtgaggacttggattctcctgtatttcttccagatcctgtatttttt
cctccaccaagaagaaaccgtaacacaaacaacagcacaatatcaaggggattagaccag
aggcctacaactccagactttgaaagagtactacaaggtgaagagcagtgggatagcaac
agtactataagccagacaacaaactga

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