Nanorana parkeri (Xizang Plateau frog): 108804908
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Entry
108804908 CDS
T04897
Symbol
TRIM28
Name
(RefSeq) transcription intermediary factor 1-beta
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
npr01001
]
108804908 (TRIM28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npr04121
]
108804908 (TRIM28)
Enzymes [BR:
npr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108804908 (TRIM28)
Protein kinases [BR:
npr01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
108804908 (TRIM28)
Ubiquitin system [BR:
npr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108804908 (TRIM28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
Bromodomain
PHD_2
PHD-1st_NSD
YaaC
Motif
Other DBs
NCBI-GeneID:
108804908
NCBI-ProteinID:
XP_018432333
LinkDB
All DBs
Position
Unknown
AA seq
712 aa
AA seq
DB search
CRDCLSPEPADSIAEPGAAVINCPVCKNQCLQRDLVDNYFLREDSSSDQAAETIQRCTSC
EDNAIANSYCVECTEWLCETCVEAHQRVKYTKDHTVKVKGGSQKDSEHTVFCPVHKQEPL
MLFCDTCDTLTCRDCQLQGHKDHQYQFLEDAVKNQRKILSALVKRLGEKHTTLQKSTKDV
RNSIRQVIDMQKRLQVDVKMAILQIMKELNKRGKLLVSDMQRVTEGHQDKLEKQHWNMAK
LQKHQEHILKFASWALESNNNTALLLSKKLIYFQLHHALKVAVDPVEPLGDLRFQWDSET
WTKHAEFFGKIVSDKTGVLPSSGSQNSNSQVLTPLTNFSPMVQNRSRTGQGRGNFIQDDY
AEGESSGLESVGQKRGRASEGGEVNEQLKKVPRVSLERLDVDLSPATQPPVFKVFPGNTT
EDYNLIVIERGNAGAGGGDPVVKEEAMETGISIPTAESNEEKPQMRADGSSESAPAVRPA
SAPSDGVASDANSGLSEAGPAARCKVCQKEGSLLACVKCKTSFHRDCHLPAVVEVPSGEW
KCMLCQDISKTDQGDVPADANPSDMSAVDQKKCERVLLELLCHEPCRPFHRLSSGADDNP
LIDLTLIRAKLQQKLSQSFASPEDFVKDVWLMFRNVSKFAEDKAVVQSIIELQAFFEARL
NLLFGDRKFSCLTGDVGADEDQQNESSTQRSSPMSTTSESVSSVKNSGGDQE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
tgccgcgactgcctcagccccgagcccgccgacagcatcgcggagcctggagcagctgtc
attaattgtccagtgtgtaagaatcagtgcttacagagggacctagtggacaactacttc
cttagggaggattcatcatctgatcaagcagcagaaactattcagaggtgcaccagctgt
gaggacaatgccatagctaatagttactgtgtggagtgcacagaatggctttgcgagact
tgtgtggaagcccatcagcgagtcaagtataccaaggatcatactgtcaaagtcaaaggt
ggatcccaaaaggattcggaacatactgtattctgtccagtacataagcaggagcctctc
atgctgttttgtgatacttgtgacacattgacctgccgtgattgccagctacaaggacac
aaagaccaccagtaccaatttttggaggatgctgtcaaaaaccagcgtaaaatcttatct
gctcttgtgaaaagacttggagaaaaacatactacacttcagaaatctaccaaggatgtt
cgtaactcaattcgtcaagtgattgatatgcagaagaggcttcaagtagatgtgaaaatg
gccatcttacaaatcatgaaagagctgaacaagcgtggaaagctacttgtcagcgatatg
cagagagtgaccgaaggccatcaggataaactagagaagcaacactggaacatggccaaa
ctacagaaacatcaggaacacattctgaaatttgcctcctgggcccttgagagcaacaat
aacacggctttgctgctttccaaaaaactgatctacttccagctgcaccatgctttgaag
gttgcagtagatccagttgaaccattgggtgatttgaggtttcagtgggattcggaaacc
tggacaaaacatgcagagttctttggtaaaattgtatcagacaaaactggtgtcctgccg
tcttcgggatcacagaattcaaattctcaagtgctgacgccccttactaacttcagtccg
atggtacagaaccggtcgagaactggtcaagggagaggtaactttatccaggatgactat
gcagagggtgaatcttctggcttagaatctgttggtcaaaaaaggggacgtgcttcagag
ggaggtgaagttaatgaacaattaaagaaagttcctagggtcagcttggagcgtttagat
gttgatcttagtccagccacacaacccccagtttttaaagtctttcctggaaacaccaca
gaggactataatctcattgtaattgagagagggaatgctggtgcaggtggaggagatcct
gttgtaaaggaggaagcaatggaaacgggcatcagcattccaacagctgaatccaatgag
gaaaagccccaaatgcgtgccgatggctcgtctgaaagtgctcccgcagttcgcccagca
agtgcacccagcgatggtgtcgcttcagatgctaactcggggttatcagaagctggccct
gctgctcgctgtaaggtgtgccagaaagaaggatcactgcttgcatgtgtcaagtgtaaa
accagcttccacagagactgccacctgcctgccgttgtggaagtgccaagtggagagtgg
aagtgtatgctctgccaggatatatcaaagaccgatcaaggagacgttccagcagatgct
aatccttctgatatgtcagcagttgatcagaagaagtgtgaacgtgtactgctggaacta
ctttgccatgagccctgccggcctttccacagactctcaagtggagcggatgacaaccca
ttgatcgacttgacactcattcgagccaagctgcaacagaagctttctcagtcattcgcc
agcccagaagactttgttaaagatgtctggttgatgtttaggaatgtcagcaagtttgca
gaggacaaagccgtggttcagtccatcatcgagctgcaggccttttttgaagcaaggctt
aacctgctctttggcgatcgcaagttctcctgcctcacgggcgatgtgggcgctgatgag
gatcagcaaaacgaaagctcgactcagcggagctcccccatgagcacaactagcgaaagc
gtatcatccgtaaagaacagcggcggcgatcaggaataa
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