Nanorana parkeri (Xizang Plateau frog): 108805010
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Entry
108805010 CDS
T04897
Symbol
NUP62CL
Name
(RefSeq) nucleoporin-62 C-terminal-like protein
KO
K14306
nuclear pore complex protein Nup62
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108805010 (NUP62CL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npr03019
]
108805010 (NUP62CL)
Messenger RNA biogenesis [BR:
npr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108805010 (NUP62CL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
Motif
Other DBs
NCBI-GeneID:
108805010
NCBI-ProteinID:
XP_018432466
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MSGFSFGTGPPAGGFSFGAAKTTAASTATTSAAPTTGFSFAGTQANAASQPQSSSLFSFS
TPVASAPSAAPTAGFSFGATTTPAAAPAAGLMFGSYGHRSSARNLLLDVPGSPMSLLSEI
VIWVELHSLLLVELHSLALEELHSLALEELHSLALEELHSLVLVELRNLVLVELRSLVLV
ELRNLVLVELRSLVLVELRSLVLVELRSLVLVELRSLVLVELRSLVLQAQHALGGAAQQA
QHALGGAAQQAQHALGGATQHALGGATQPVQNANFPFGTTTAQTQPSLTGGFSFSGQPTT
AVSSTTNPVSAANTQAGASFLASAFGTAPTTVQLATVAATLASAHASASQPTATMFSKPL
EVAPASTATSSASISSIGSLLATSAPSLFSLSTTTASGPDGKSPFPCTAPSFFARLSLLL
VQEFLTMSSAGPAPPPLPAAPAVMTYVQLENLINKWSLELEDQEKHFLQQATQVNLWDKT
LISNGERITSLHREMEKVKLDQKRLDQGLDFILSQQKELEDILSPLEDSVKEQNGTIYLQ
HADEEREKTYKLAENIDAQLKRMSQDLKDVIEHLNTSAGPGDTSNPLQQICKILNAHMDS
LQWVDQNSALLQRKVEQVTKECETRRKEQERGLPLAFD
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcttcagctttgggacgggaccccccgccggagggttcagcttcggagcggcc
aagacgacggcggcatcaacggcaacaacgtccgccgccccgaccaccggcttcagtttc
gctggcacgcaggcgaatgccgcttcccagccccaatccagttcgctcttctccttctcc
actccggtggcgtcggcaccgtccgcggcgccaacagccggattttcttttggcgcaaca
acaacgccggctgcggcacctgcggcggggctgatgtttgggagctacggccacagatcg
tcagcacgcaacctacttctggatgtgcctggctcccctatgtcattactatcggaaata
gtaatatgggtggagctacacagcctgctgttggtggagctgcacagcctggctttggag
gagctgcacagcctggctttggaggagctgcacagcctggctttggaggagctgcacagc
ctggttttggtggagctgcgcaacctggttttggtggagctgcgcagcctggttttggtg
gagctgcgcaacctggttttggtggagctgcgcagcctggttttggtggagctacgcagc
ctggttttggtggagctacgcagcctggttttggtggagctacgcagcctggttttggtg
gagctgcgcagcctggttttgcaagctcagcatgctcttggcggggccgcacagcaagct
cagcatgctcttggcggggccgcacagcaagcacaacatgctctgggcggggccacacaa
catgctctgggcggggccacacagcctgttcagaatgcaaacttcccttttggaacgaca
accgcacagacgcagccatctctcaccggaggcttctccttttctggccaaccaacgacg
gccgtctcctctactacaaatccagtgagcgccgccaacactcaggcaggcgcatccttc
ctcgcgtcagcatttggcacagcaccaaccaccgtccagttggccaccgtcgccgctacc
ctcgcctcggcacacgcctctgctagtcagccgaccgccacgatgttttcgaaaccactt
gaggtggcaccagcatcgacggcgacatcttcagccagcatttcgtctatcggctccctc
ctggccacttctgcgccatctcttttttcacttagtaccacaaccgcttcaggtcctgac
gggaagagtccgttcccttgtacagccccctccttctttgcacgccttagccttctcctg
gtccaggagtttctaactatgagctctgctggcccagctcctccacccctccctgctgcg
ccggccgtcatgacctacgtgcaactcgaaaacctgatcaacaaatggagcttagagctt
gaggatcaggaaaagcattttctgcagcaagccacgcaagtcaacctctgggacaagacc
ctgataagcaatggggagaggataacctcgttgcatagagagatggagaaggtgaaactg
gatcagaagaggttggatcagggattagatttcatcctctctcagcagaaggagctggaa
gatatcctgagccctctggaggactcggtcaaggagcagaacgggaccatctacctccag
cacgcagacgaagaaagagagaagacgtacaagctggcagaaaacatcgacgcacaactg
aaacgcatgtcccaggatttgaaggatgtcatcgaacatctgaacacgtccgccggaccc
ggagacaccagtaacccgctccagcagatctgtaaaatcctcaacgctcacatggactcg
ctgcaatgggttgatcagaactctgctcttcttcagaggaaagtggaacaggtgacgaag
gaatgcgagactcggaggaaggagcaggagagaggattgcctctggcgtttgattaa
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