Nanorana parkeri (Xizang Plateau frog): 108805020
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Entry
108805020 CDS
T04897
Symbol
TNC
Name
(RefSeq) tenascin
KO
K06252
tenascin
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04510
Focal adhesion
npr04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108805020 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108805020 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
npr00536
]
108805020 (TNC)
Glycosaminoglycan binding proteins [BR:
npr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108805020 (TNC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
EGF_TEN
Fibrinogen_C
EGF_Teneurin
EGF_Tenascin
EGF_2
Ig_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
Pur_ac_phosph_N
EGF
hEGF
NDNF
TauD
DUF4397
Motif
Other DBs
NCBI-GeneID:
108805020
NCBI-ProteinID:
XP_018432476
LinkDB
All DBs
Position
Unknown
AA seq
1819 aa
AA seq
DB search
MGYPINVFACLLLMLSSQVNSGLIRKVIRHKRDTGFNVTLPEDNQPVVFNHVYNIKVPMG
SLCSVDLDPEGTSENEVKPKTELGKNYQETTLDEGNQIVFTHRINIPRRACGCAAAPDIK
DLLSRLEELENLVSSLREQCTSGAGCCSGSQTAQGKINLCGCICEPGWKGPNCSEAECPG
NCNNRGICVDGKCVCNPGYTGEDCSELTCLNDCNDQGRCVNGVCVCFDGYGGEDCSEEVC
PVPCGEHGKCVNGRCLCSEDFTGEDCSEPKCPGNCNNRGRCVDNECVCDEPYTGEDCSEL
ICPNDCFDRGRCVNGVCFCEEGFTGEDCGEVACPNNCNNNGLCVNGVCVCNEGFASDDCG
ELGCPNDCNDRGRCVNGVCICKEEYIGEDCGELRCPNDCNNRGRCVNGQCVCDVEYVGAD
CGDLRCPNDCDKRGSCVNGQCVCDEGFTGLDCSELRCPNDCDNKGRCVNGQCVCDEGFMG
LDCSELRCPNDCDNKGRCVNGQCVCDEGFTGLDCSELKCLNDCNNKGRCVNGQCVCDEGF
MGDDCSELRCPNDCNHRGRCVNGQCVCDNLFIGDDCGELRCPDDCNNRGVCVDGQCICNE
GFVGDNCVSPPEDLVVTDVTTQTVNLEWANKIKVSRYLISYTPTSVGGLELEFSVPGEQT
TATIKELEPGVEYFVRVYAILKNQKSIPVSARVATHLPTTDDLRFKTVRETYVDVEWEPL
DIPFDAWKLIFQNTKKLNGEISTSLEKSVTSYTQQGLAPGETYEVSIHVVKNNTQGPPLT
KLTTTRLDAPSEVDVKDVTDTSALITWMKPLAQIDGVSLTYGTGNEPRTTVELSEDESQF
AMNDLRPDTEYEVILISRRGEMTSSPVSETFTTDLDSPKNLKKVSQTDTTITLEWKNTQA
NVDFYRIKFAPLSGGDHEEITVPRSNLATTKATLTGLRPATEYGIGLTAVKQDRESSPAT
INAATDLDAPKDLEIASATETTMNLRWIKSVAKIDQYRLVYTPIGGSQSETQVLRDANSY
VLTGLEPGKEYSISLVAEKGRHKSKPASVVGRTEILRELGDLVVSQVDWDSFRLTWMAPD
NNYEKFVIQVHELKDGEEPQAVEVPGELRYLEVPGMKPATKYNITLHGVIQGQVTKPLFG
EAVTENKPEVDNLAVTGVTPESFDLSWTATQDSFDGFDVEVTDEDRLQEPVKFNVPGNLR
NTSISGLLPNTHYTIYLYGIIHGQRMQPIRVSATTESKPEVGNLEVSSVTPEGFQLSWTA
DEGGFDNFIIKMQDAKRLYEPVVFKVPGSERTSTVTGLRDGTEYEIELHGMASGQRSPPV
NGKATTGLGSPQGLSFSDITENSAKVIWLAPRIRVNKFIITYVPVAGGASQTVEVDGSKT
QTTLVNLSPGVIYTVSIVSVKGNEQSQPASGSLTTALDGPSALRAINVTESEALALWKPS
FASVDSYVISYSAKNAPAVDVTVSGNTAENDIIGLQPATEYTLKIYAVRGSLKSKEIFTT
FTTALDGPRDLTASEIQADSALVTWRPPRSIISGFLLIYESVDGTVKEVALGPDATSYRL
LDLSPSAQYTVRLQAINDNVKSKFIQTVFTTTGRLYPLPKDCSQALLNGETESGMYTIYA
DGDQSQPMEVYCDMNVDGGGWIVFLRRIDGSEDFYRNWRAYASGFGDPSKEFFMGLENLH
KITSQGQYELRVDLRDNDETAYAVYDKFSVGDSRKRYRLSVSGYTGTAGDSMTYHDGRSF
STYDKDNDSAITNCALSYKGAFWYKNCHRVNLMGRYNDNSHSQGINWFHWKGHEYSIQFA
EMKLRPVSFRNLEGRRKRA
NT seq
5460 nt
NT seq
+upstream
nt +downstream
nt
atggggtatcccataaatgtttttgcttgcctcttattaatgctgagttctcaagtgaac
agtggactcataaggaaagtcatccgacacaaaagagacaccggattcaatgtcacctta
cctgaagacaatcaaccagtagtctttaaccatgtttacaatattaaagttccaatgggc
tctctgtgttctgtagacctggacccagaaggtacatctgaaaacgaggtcaagccgaag
acagagctcggcaaaaactatcaggagaccacgttagatgaaggaaatcagattgttttt
acacaccgtatcaacatcccaagacgggcatgtggatgtgcagctgccccagatattaaa
gaccttctcagcaggttagaggaattggaaaacttggtgtcatcgctacgagagcaatgt
acttcgggagctgggtgctgttctggttcacaaaccgctcaaggtaagattaacctctgc
ggctgcatttgtgagcctgggtggaagggacccaactgttctgaagctgaatgcccggga
aactgcaacaaccggggaatatgcgtggacgggaaatgcgtctgcaatccgggttacacc
ggagaggactgcagtgaactgacctgcctgaacgactgtaacgaccaagggagatgcgtc
aacggcgtctgcgtttgctttgatggctacggtggggaagactgcagcgaggaggtctgc
cctgtgccttgtggtgaacacgggaagtgtgtcaacggccgctgcttgtgcagcgaggat
ttcaccggggaagactgcagcgaaccaaagtgtccaggcaactgcaacaaccgcggacgt
tgcgtggacaacgagtgcgtctgcgacgagccctacacaggggaggactgcagtgaactg
atctgccccaatgactgctttgaccgcggccgctgtgtcaacggcgtgtgcttctgcgag
gagggattcaccggagaggactgcggagaagtggcttgtccaaacaactgcaacaacaac
ggcttgtgcgtgaacggagtgtgcgtgtgcaacgaaggcttcgctagcgacgactgcggc
gagttaggatgccccaatgactgcaatgacaggggtcgttgtgtcaatggcgtgtgcatt
tgcaaggaagagtacataggagaggactgcggcgagctcaggtgtccaaacgactgcaac
aacagaggacgctgcgttaacggacagtgcgtttgcgacgtggagtacgtcggagctgac
tgtggtgatctcagatgccccaatgactgtgacaagagaggaagctgcgtcaatgggcag
tgcgtgtgcgacgaaggcttcacgggccttgactgtagcgagctgaggtgccccaatgac
tgtgacaacaagggccgctgcgtcaatgggcagtgcgtgtgcgacgaaggcttcatgggc
cttgactgtagcgagctgaggtgccccaatgactgtgacaacaagggccgatgcgtcaat
gggcagtgcgtgtgcgatgaaggtttcacgggtcttgactgcagtgaactaaaatgcctc
aatgactgtaacaacaagggccgctgcgtcaatgggcagtgcgtgtgcgatgagggattc
atgggagacgactgctcggaacttaggtgccccaatgattgcaaccacaggggacgttgc
gttaacggccagtgcgtctgcgacaacttattcataggtgacgattgcggtgaactgaga
tgccctgatgattgtaacaacagaggagtgtgtgtcgatgggcagtgcatatgcaatgaa
ggatttgtcggggacaactgtgtatcaccaccagaagacctagttgtgacagacgtaacc
acccaaacggtcaatctcgaatgggccaacaaaatcaaagtcagccgatatctgatctca
tacactcccacaagtgtgggagggctagagctcgaattcagtgtgcctggagagcaaacc
acagccaccattaaggagcttgaaccgggtgtggagtactttgtccgtgtctatgctatc
ctgaaaaaccagaagagcatccctgtcagtgcaagggttgcaacacacttgcccaccaca
gatgatctgaggtttaaaaccgtaagggagacctatgtagatgtggaatgggagccgctg
gatatcccatttgacgcatggaaactgatattccagaacaccaaaaagctaaatggagag
ataagcacaagcctggaaaaatcggtcacctcctatacacaacaaggacttgcccccgga
gagacctatgaagtttcaatccatgtagtgaagaacaacacgcaaggaccgcctttaacc
aaactcaccacaacaagactggatgcccccagtgaagtcgatgtaaaagatgtcaccgac
acttccgcactcataacatggatgaaacccctggcacaaatcgatggagtttctctcacc
tacggaacaggaaacgagcccagaaccaccgttgaactttctgaagatgaaagccagttt
gccatgaatgacctacgacctgacactgaatatgaagtcatattaatatcccgacgtggg
gaaatgacaagttctcctgtctcagagacctttacaacagatctggattctccaaagaac
ctgaagaaggtttcccaaaccgataccactatcacgctcgaatggaagaatacccaagcc
aacgtggatttctacaggattaagtttgccccactctcaggaggtgatcatgaagaaata
actgtgcccaggagtaatctagctaccaccaaggctacacttacaggtctcaggcccgca
actgaatatggcatcggactgactgcagttaaacaggaccgagaaagctctccagccact
attaatgcagcaacagacttggacgctcccaaagatctagagatcgccagcgccacagaa
acaaccatgaacttgcgttggataaagtcagtagccaaaatcgatcaatacagacttgtg
tacacaccaattggtggcagccaaagtgaaactcaggttctaagagatgccaattcctac
gtactgaccgggctggaacctggtaaagaatacagcatttcactcgttgctgagaaaggc
cgacataagagcaaaccggcatctgtggttggacgcaccgaaattctgcgtgagctgggc
gacttggtggtgtcccaagtggactgggactctttcaggctcacgtggatggcgccagac
aacaactatgagaaatttgtgattcaggttcacgaattaaaggacggagaagaaccacaa
gccgtcgaggttcctggagaacttcgctatctggaagtgccgggcatgaagccggccaca
aaatataacatcacgttacacggggtgattcagggacaggtcaccaagcctctctttgga
gaagctgttacagaaaacaagccagaagtagacaaccttgccgtcaccggtgtcacacct
gagagctttgacttgtcctggacagccacacaagattcctttgatggatttgatgtagag
gttactgatgaggacaggttacaggagccagtgaaatttaatgtccctggcaatctcagg
aatacttccatctcaggtttattacccaatactcattacaccatctacctctatggtatt
attcacggtcaacgaatgcaacctattagggtctcagcaactacagaatcgaaacccgaa
gtgggaaacctcgaagtttccagtgtgacccctgagggcttccaattgtcatggacagct
gacgagggcggttttgacaactttatcattaagatgcaggacgccaaacgcctttatgag
ccggtcgtttttaaggtgccgggcagtgagcgcacgagcaccgtgaccgggctgagagat
ggcactgaatatgagattgagctgcatggtatggctagtggtcagcgctctccgccggta
aacggaaaagcaacaacaggtttgggatctccgcaggggctgtccttctctgacatcacc
gagaactctgccaaggtgatctggttagctccaagaatccgggtgaacaagttcatcatc
acatatgttcccgtggctggaggcgccagtcagacagttgaagttgacggatcaaaaaca
caaactacgttagtcaacctctcgccgggagttatatacactgtgagcattgtgtccgtg
aaaggaaacgagcaaagccaaccagcttctggttctctgaccacagccctcgacggccca
tcagctcttcgtgccatcaacgtcacggagtctgaggctctggcactgtggaaaccttct
tttgcctctgtggacagttacgttatctcctactcagccaagaacgctcccgccgtcgac
gtcacagtttccggaaacacagcagagaacgacattatcggacttcagccggctacagaa
tacaccttaaagatctacgctgttcggggatcacttaagagcaaggaaatcttcacaacg
tttacaacagcattggatggccctagagacctgacggcgagtgaaatccaggctgactca
gctctggtcacgtggagacccccaagatccattatctctggtttcctgctgatctacgag
tctgtagatggaacagtcaaggaggttgctctggggcccgatgccacctcataccggctg
ctggatctcagcccgtctgcgcaatacaccgtaagactgcaggctataaacgataacgtc
aagagcaaattcatccaaaccgtcttcacaacaaccgggcgtctctacccactgcctaaa
gattgctcacaagcccttctgaacggagaaaccgagtcaggaatgtacaccatatatgcc
gatggggatcagtcccaacccatggaagtgtactgcgacatgaacgttgatggcggagga
tggattgtgtttttaagaagaattgatggttctgaagatttttacaggaactggagggca
tatgctagtggattcggagatccttcaaaggagttcttcatgggtttggaaaacttgcac
aaaatcacctcgcaaggacagtacgagctccgcgtggaccttagagacaacgacgaaact
gcttatgctgtttatgacaagttcagcgttggggactccaggaagcggtacaggctttcg
gtcagcggctacaccggcacggcaggagattcgatgacctatcacgacggacgctcattt
tccacatatgacaaggacaatgattctgccattaccaactgcgccctgtcctacaaagga
gccttctggtataagaactgtcacagagtgaaccttatgggcagatataatgacaacagc
cacagtcagggcatcaactggttccattggaagggtcacgaatactccatccagtttgca
gaaatgaagctcagacccgtgagcttcagaaatcttgaaggaagaaggaagagagcgtaa
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integrated database retrieval system
