Nocardioides panacis: KRR39_00980
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Entry
KRR39_00980 CDS
T08276
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
nps
Nocardioides panacis
Pathway
nps02020
Two-component system
nps02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
nps00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KRR39_00980
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KRR39_00980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nps03021
]
KRR39_00980
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
nps02035
]
KRR39_00980
Transcription machinery [BR:
nps03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KRR39_00980
Bacterial motility proteins [BR:
nps02035
]
Flagellar system
Flagellar assembly proteins
Stator
KRR39_00980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_3
HTH_37
UPF0122
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QWZ10372
UniProt:
A0A975Y2B2
LinkDB
All DBs
Position
191196..191999
Genome browser
AA seq
267 aa
AA seq
DB search
MVRRHLPLVGHAVRETMSRVPGHVNRDDLTSAGMMALVQAAQSFDPTRGAAFSTHASTRI
RGAIVDELRGLDWASRSVRRRARQVDDTRGRIAATLGRPAEDHEVAAALGIGTSELSAHR
EDVARASVVSLQGFDETGIDDLLPAHTVTPADEIEQRERVAYLHDAVEHLPERLRVVVEG
YFFRDLPMAELAAELGVSESRISQLRAEAIVLMRGAMNAALEPELAERHDRPQGCAARRK
EAYYASVASNRSFAARLTHTHVASHTA
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
ctggtccgtcgccacctcccgctcgtcggtcacgccgtgcgcgagaccatgtcccgggtt
cccggtcacgtgaaccgcgacgacctgacctccgccggcatgatggcgctggtccaggcg
gcccagtcgttcgacccgacccggggcgccgcgttctccacccacgcctccacccgcatc
cgcggcgcgatcgtcgacgagctccgcgggctggactgggcgagccgctcggtgcgccgc
cgggcccgccaggtcgacgacacccgcggccgcatcgccgcgaccctgggccgtccggcc
gaggaccacgaggtggccgccgccctgggcatcgggaccagcgagctgtccgcgcaccgt
gaggacgtcgcccgcgcgtcggtcgtctccctccagggcttcgacgagaccggcatcgac
gacctgctgccggcgcacaccgtcacccccgccgacgagatcgagcagcgcgagcgggtg
gcctacctgcacgacgcggtcgagcacctgcccgagcggctgcgcgtggtcgtggagggc
tacttcttccgcgacctgccgatggccgagctggccgcggagctcggtgtctccgagagc
cggatctcccagctgcgcgccgaggcgatcgtgctgatgcgcggcgcgatgaacgcggcc
ctcgagcccgagctggccgagcgtcacgaccggccgcagggctgcgccgcacgccgcaag
gaggcgtactacgccagcgtggccagcaaccgcagcttcgcggcccggctgacccacacg
cacgtcgcctcgcacaccgcctga
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