Nocardioides panacis: KRR39_02145
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Entry
KRR39_02145 CDS
T08276
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
nps
Nocardioides panacis
Pathway
nps02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
nps00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KRR39_02145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nps03021
]
KRR39_02145
Transcription machinery [BR:
nps03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KRR39_02145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
QWZ08683
UniProt:
A0A975SZ65
LinkDB
All DBs
Position
complement(412068..412910)
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AA seq
280 aa
AA seq
DB search
MTVPVHLTSRQERDLVVATEAGDAEACRRLVDAFLPAISAQARHFPIGDGVLREELLQEG
VVGLLSAARRYDATRNVPFWAYASFWVRKAMQRLVAELTRPVALSDRAARDLAALVTARS
EHLQARGAEPTSDELVRATGLSRPHLEHLELAARTPRSLDQPGLTGDAEGAAALRDQLPD
GAAELAFETVLDALERHDVLELTERLGDRERVVVRAHYGIGVPQQTLRQIGDRLGVTAER
ARQIEVSALGHLRNVLADTRDLDVPAPRGAPGYASGPYAS
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
gtgactgttcctgtacacctcacctcccggcaggagcgcgatctcgtggtcgcgaccgag
gccggggatgccgaggcctgccggcgcctggtggacgccttccttccggctatctccgcg
caggcccgccacttcccgatcggggacggggtcctccgcgaggagctgcttcaggagggc
gtggtcgggctgctctcggcggctcgtcggtacgacgccaccaggaacgtcccgttctgg
gcgtacgcgtcgttctgggtccgcaaggccatgcagcggctcgtcgcggagctgacccgc
cccgtcgccttgtccgaccgggccgctcgggacctcgccgcgctggtcacggcccgcagc
gagcacctccaggcccgtggagccgagccgaccagcgacgagctggttcgggcgacggga
ctgtcccgaccgcatctggaacacctggagctcgccgcgcgtacgccgcgaagcctggat
cagcccggcctgaccggggacgccgagggagccgccgctctgcgcgaccagctccccgac
ggtgctgccgagctggcattcgagacggtgctcgacgcgctggaacggcacgacgtgctc
gagctgacggagcgactcggtgatcgcgaacgtgtcgtcgtccgcgcccactacggcata
ggggtgccacagcagaccctgcgccagatcggcgacaggctcggggtcaccgctgagcgg
gcacgtcagatcgaggtgagcgcgctgggacacctgaggaacgtcctggcggacactcgc
gacctcgacgtccctgcaccccgcggtgcgccgggctacgcctctggtccgtacgcatcg
tga
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