Nocardioides panacis: KRR39_03360
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Entry
KRR39_03360 CDS
T08276
Name
(GenBank) zf-HC2 domain-containing protein
Organism
nps
Nocardioides panacis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QWZ08901
UniProt:
A0A975Y0W6
LinkDB
All DBs
Position
complement(665641..669534)
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AA seq
1297 aa
AA seq
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MLQGGGGPDVAFRAYLLTAVRRLHVDRLRAGQRLHTTDDLTPFDPGVPFQDTAVAGFESG
AAAKAFASLPERWQLVLWHLEVEDQKPADIAPLLGMSANSVSALAYRAREGLRQAFLTMH
ISDLTETDCRWVNEHLGAFIRSGLSKRDTGKVQQHLDGCRRCTAMYLELNEVNSNLAGII
GPLLLGAAATGYLASGGAGAAGLVGLLSRAKDLVLAHTGVATAAGVAAGVSAAAAVAAVV
ITTGGPSPDKVVADPSRGTVTTAPASPGASPGASPGASPGDRPSRSPGAPATTTPGAPPT
AVAPSTTVSALPVLPTDAPTGAPGALSTEAPGEPAVSDTVEPAALPDRFIGDPVVDPAGF
VTVETRNLRADDVVDVSLVSDETTLTDPATDASCRVVSGRHAVCTPGAADLQGGGQAVPT
VVIGDYTIRLALDFPGYMVSDDVSVQVSVDGQAGSSGAVRSFRPARPAAYDFAALRVTGP
DAHTVTGDVDHFRFGTTASLPPRVTGLRYELTGPGRFRPADAEGCTASDDRSVLRCPAVR
RGDTVSLPVDAGGLTGATATTVAVSSLDDVVDTTPDDRTDTLTLAPGADLGLDLSVLSAN
PGRDGLVELDGRLTGTRAGLGSVTYAVTSGATFAGAGNDGCSVAGATMACPPSDGPLTVS
LLAADATRPTPVTVSVVPAAPFEAVGDGPHAVGVTLPGRPTQDYAFGDPTVTAHTVSGDT
DRYTLTGVVGPLPSSGSSADFAVTDGGSFAASQPDGRCRTTGGTVHCTSLVEGERLALLV
ESTAPSAHPLSVTLLPGDPFDDPDTSNNTTRPVTVRPGSALALTPSDLGALHAAQGDYPV
TLHLSDVRSGVPGVTYTVGDGTTVTGSSTPGCTSTPGGLTCPAPVPADVRFTVRSATPAR
TTPLTVSVAPGGDFEQLGTSGTATGSLAAAHDFSMGALTQVGHTVTGGTDHYTLRSRVAA
VPAAVDRLTFRLTGGSFVTAGQDPGCTVQDARTVSCGDLGSARAVDFAVDADGTTRPDVT
IALDVPAGYDDTSPGNESGSIAGLTPGVDLATSPPTPADPAPQADRTTYRVATTMSGVRP
GLGSVRYTVTGAAPTAVTGTGCSLSGTTVTCTGPADGHVVTFTLTPANPRAATPVTVDLA
PVAPYVELAPADNSVTATLAPDVVLGAVTQTADSTQYASVRVSVSGVPPGATTVRLRLGG
ADAGLGTGQTHFAQGASGADGEGNVDCYTSDASGNAATNGLYATCTGVGTATAGAFYVDT
RLAHRHPGVSQVDLTVIPVGVDEGTHGGNNSRALTVH
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcagggcggtggcggcccggacgtcgccttccgcgcctacctgctgaccgccgtc
cgccggctgcacgtcgaccggctgcgcgccgggcagcggctgcacaccaccgacgacctg
acgccgttcgacccgggcgtgccgttccaggacaccgccgtcgccggcttcgagagcggc
gcggccgcgaaggcgttcgcctcgctgcccgagcggtggcagctcgtgctctggcacctc
gaggtcgaggaccagaagcccgccgacatcgccccgctgctcgggatgagcgcgaactcg
gtgtccgcgctcgcctaccgggcccgggaggggctccgccaggccttcttgaccatgcac
atctcggacctgaccgagaccgactgccggtgggtcaacgagcacctcggcgcgttcatc
cggtcggggctgtccaagcgggacaccggcaaggtgcagcagcacctcgacggctgccgc
cggtgcacggcgatgtacctcgagctcaacgaggtcaactcgaacctggccggcatcatc
ggcccgctgctgctcggcgccgccgcgaccggctacctcgccagcggcggggccggcgcg
gccgggctcgtcgggctgctgtcccgggccaaggacctcgtgctcgcccacaccggggtg
gccaccgccgccggggtcgccgccggcgtgagcgccgcggccgccgtcgccgcggtcgtg
atcaccacgggcggcccgtccccggacaaggtcgtcgccgacccgtcgcgcggcaccgtg
accaccgcgccggcgtcccccggcgcctcgcccggcgcctcgcccggcgcctcgcccggc
gaccggccgagcaggagcccgggcgccccggccaccaccacccccggggcaccgccgacc
gcggtcgcccccagcacgaccgtgtccgcgctcccggtgctgccgaccgacgcgccgacc
ggggccccgggcgccctgtccacggaggccccgggcgagccggccgtgtcggacaccgtc
gagcccgccgccctgcccgaccggttcatcggggacccggtcgtcgacccggccgggttc
gtcaccgtggagacccggaacctccgcgcggacgacgtcgtggacgtcagcctcgtctcc
gacgagaccacgctgaccgacccggccaccgacgcctcctgccgcgtggtgagcggccgg
cacgcggtgtgcacgccgggggccgccgacctgcagggtggcggccaggcggtccccacc
gtggtgatcggcgactacacgatcaggctggcgctggacttccccggctacatggtctcc
gacgacgtctcggtccaggtgtcggtcgacgggcaggcgggctccagcggcgcggtccgg
agcttccggccggcccgcccggcggcgtacgacttcgcggcgctgcgggtcaccggcccg
gacgcgcacaccgtcaccggggacgtcgaccacttccgcttcgggaccaccgcgtcgctg
ccgccgcgggtcaccggcctgcgctacgagctcaccggcccgggccggttccgtcccgcc
gacgctgagggctgcaccgcctccgacgaccgctcggtgctgcgctgtcccgccgtacgg
cgcggggacaccgtgtccctcccggtcgacgccggagggctgaccggcgccaccgccacc
accgtcgcggtctcctcgctcgacgacgtcgtggacaccacgccggacgaccggaccgac
accctcacgctggccccgggcgccgacctcgggctcgacctgtcggtgctgtcggcgaac
cccggccgggacgggctggtcgagctcgacggccggctcaccgggacgcgggccggcctg
ggctcggtgacctacgcggtgacgtcgggggcgaccttcgccggcgccggcaacgacggc
tgcagcgtcgcgggcgccacgatggcctgcccgccgtccgacggcccgctcacggtgagc
ctgctggccgccgacgccacccgtccgaccccggtcaccgtctcggtggtcccggcggcg
ccgttcgaggcggtcggtgacggcccgcacgcggtcggcgtcacgctgcccgggcgccct
acccaggactacgccttcggcgacccgaccgtcaccgcgcacaccgtgtccggcgacacc
gaccgctacacgctcaccggggtcgtcggcccgctcccgtccagcggcagctcggccgac
ttcgcggtcaccgacggcggcagcttcgccgcctcgcagcccgacggccgctgccgcacg
accggcggcacggtgcactgcacctcgctggtggagggcgagcgcctcgccctgctggtc
gagtcgaccgccccctcggcgcacccgctgtcggtgacgctgctgccgggcgacccgttc
gacgacccggacacctctaacaacaccaccaggccggtcacggtgcgcccgggcagcgcg
ctggcgctgaccccgtccgacctgggcgcgctgcacgccgcgcagggcgactacccggtg
acgctgcacctctcggacgtccgctccggggtgccgggcgtgacctacaccgtcggggac
ggcaccacggtcaccggctcgtccacgccgggctgcaccagcacccccggcggcctcacc
tgcccggcgccggtgcctgccgacgtgaggttcaccgtccgctccgcgaccccggcacgg
accacaccgctcaccgtctcggtcgcccccggcggcgacttcgagcagctcggcacgtcc
ggcaccgcgaccggctccctggcggcggcccacgacttctcgatgggcgccctcacccag
gtcggacacaccgtcaccggcggcaccgaccactacacgctgcgcagccgggtcgcggcg
gtcccggcggcggtggaccggctgaccttccggctcaccggcggctccttcgtgaccgcc
ggccaggaccccggctgcaccgtccaggacgcacggaccgtctcgtgcggcgacctgggg
agcgcccgggccgtcgacttcgcggtcgacgccgacggcaccacccggcccgacgtgacg
atcgcgctcgacgtgcccgcgggctacgacgacaccagcccgggcaacgagtccggcagc
atcgcgggcctcacccccggcgtcgacctggccacctccccgccgacgcccgccgacccg
gccccgcaggccgaccgcacgacctaccgggtggccaccacgatgagcggcgtccgtccc
gggctcggctcggtgcgctacacggtgaccggcgcggcgccgaccgccgtgaccggcacc
gggtgcagcctgtcgggcacgacggtcacctgcaccggacccgccgacgggcacgtggtc
acgttcacgctcacgccggcgaacccccgggccgcgaccccggtgaccgtcgacctcgca
ccggtcgcgccgtacgtcgagctggcaccggccgacaacagcgtcaccgccacgctggcc
cccgacgtcgtgctgggcgccgtcacccagaccgccgacagcacgcagtacgcctcggtc
cgggtctccgtcagcggcgtgccgccgggcgccaccacggtccgactgcggctgggcggt
gccgacgccgggctcgggaccggtcagacccacttcgcccaaggcgccagcggcgccgac
ggcgaggggaacgtggactgctacaccagcgacgcgtccgggaacgccgccaccaacggg
ctctacgccacctgcacgggggtcgggaccgcgaccgcgggcgcgttctacgtcgacacc
cggctcgcccaccggcacccgggcgtcagccaggtcgacctcaccgtcattcccgtcggc
gtcgacgagggcacccacggcggcaacaactcgcgtgccctcaccgtccactga
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