Nocardioides panacis: KRR39_03530
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Entry
KRR39_03530 CDS
T08276
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
nps
Nocardioides panacis
Pathway
nps03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KRR39_03530 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nps03021
]
KRR39_03530 (rho)
03019 Messenger RNA biogenesis [BR:
nps03019
]
KRR39_03530 (rho)
Transcription machinery [BR:
nps03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
KRR39_03530 (rho)
Messenger RNA biogenesis [BR:
nps03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KRR39_03530 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
Motif
Other DBs
NCBI-ProteinID:
QWZ10405
UniProt:
A0A975T2H3
LinkDB
All DBs
Position
700226..702301
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AA seq
691 aa
AA seq
DB search
MLLPELKQMAGGLGIKGVGALRKSQLIDAIKAAQAGGGSGGGPGGGPGGGQAQSGAPTET
KRSRGTTPAAQAEAPKQEAPKQEAPKQEAPRAESAQSAPEPQARSERPARSERPARGERP
VEERSEDRSGADRSRGNERAGERGSERPNDRGGDQGAETSERGPRGQQNAGTQGGQQHQG
GNQGNQGGNQGNQGGNQGNQGGNQGNQGGQQNQGGQQNQGGQQNQGNRNDDRDEEGGRRN
RRRRGRDRADRNDNRSDNRNDGRNDGRNDGRGDNRNDGRNDGRNDGRSDRNDRSSRGSRN
EPDTTVLEDDVLVPAAGILDVLDNYAFVRTSGYLPGSDDVYVSLSMVRRLGLRRGDAITG
QVRQPREGERKEKFNPMVRIDTINGADPEAAKGRVEFQKLTPLYASERLRLETDSANLIG
RVIDIAAPIGKGQRGLIVSPSKAGKTMIMQSIANSITTNNPECHLMVVLVDERPEEVTDF
ERSVKGEVISSTFDRPASDHTAVAELAIERAKRLVELGHDVVVLLDGITRLGRAYNLAAP
ASGRILSGGVDSAALYPPKRFFGAARNIEDGGSLTILATALIESGSKMDEVIFEEFKGTG
NMEIRLRRDFADKRIFPAIDAVQSGTRREELLMSKEELSIVWKLRRVLSGLDSQQALELL
LERLKKSSSNYEFLTQVQKTTPTVSGRGDKD
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcccgagctcaagcagatggcgggcggcctgggcatcaagggcgtcggcgcc
ctgcgcaagagccagctgatcgacgccatcaaggccgcccaggcgggcggcggctccggc
ggtggccccggcggtggccccggcggtggccaggcgcagtccggcgccccgacggagacc
aagcggtcccgcggcaccaccccggccgcccaggccgaggccccgaagcaggaggccccg
aagcaggaggccccgaagcaggaggccccgcgggccgagtccgcgcagtccgcccccgag
ccgcaggcgcgcagcgagcgtcccgcccgcagcgagcgcccggcccggggcgagcgtccc
gtcgaggagcggtccgaggaccgttccggcgcggaccgcagccgcggcaacgagcgggcc
ggcgagcgcggcagtgagcgcccgaacgaccgcggcggcgaccagggcgcggagacctcc
gagcgtggcccgcgcggccagcagaacgccggcacccagggcggtcagcagcaccagggc
ggcaaccagggcaaccagggcggcaaccagggcaaccagggcggcaaccagggcaaccag
ggcggcaaccagggcaaccagggcggccagcagaaccagggcggccagcagaaccagggc
ggccagcagaaccagggcaaccgcaacgacgaccgggacgaggagggcggccgccgcaac
cggcgtcgccgcggccgcgaccgcgccgaccgcaacgacaaccgctccgacaaccggaac
gacgggcgcaacgacgggcgcaacgacggccggggcgacaaccggaacgacgggcgcaac
gacggccggaacgacgggcgcagcgaccgcaacgaccggagcagccgcggcagccgcaac
gagcccgacaccacggtcctcgaggacgacgtcctggtgccggccgccggcatcctcgac
gtgctggacaactacgccttcgtgcggaccagcggctacctgcccggctcggacgacgtc
tacgtctccctgtcgatggtccgccggctcggcctgcgccgcggcgacgcgatcaccggc
caggtgcgccagccccgcgagggcgagcgcaaggagaagttcaacccgatggtgcgcatc
gacaccatcaacggcgccgacccggaggccgccaagggccgggtcgagttccagaagctc
accccgctctacgcctcggagcggctgcgcctcgagaccgactcggccaacctgatcggc
cgcgtcatcgacatcgccgcgccgatcggcaagggccagcgtgggctgatcgtgtcgccc
tccaaggccggcaagacgatgatcatgcagtccatcgcgaactcgatcaccacgaacaac
cccgagtgccacctcatggtggtgctggtcgacgagcgtcccgaggaggtcaccgacttc
gagcgctcggtcaagggcgaggtcatctcctcgacgttcgaccggccggccagcgaccac
accgcggtcgccgagctggccatcgagcgtgccaagcgcctcgtcgagctcggccacgac
gtggtcgtgctgctcgacggcatcacccggctgggccgggcgtacaacctggccgccccg
gccagcggccggatcctgtccggcggcgtggactccgccgcgctctacccgccgaagcgc
ttcttcggtgccgcccgcaacatcgaggacggcggctcgctgacgatcctggccaccgcg
ctgatcgagagcggctcgaagatggacgaggtgatcttcgaggagttcaagggcaccggc
aacatggagattcggctgcgccgcgacttcgcggacaagcggatcttcccggcgatcgac
gccgtgcagtccggcacccgccgcgaggagctcctgatgagcaaggaggagctgtccatc
gtctggaagctccgccgggtgctctcgggactcgacagccagcaggccctcgagctgctc
ctcgagcggctcaagaagtcctcgagcaactacgagttcctgacccaggtccagaagacg
acgccgaccgtgagcggtcgcggcgacaaggactaa
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