Nocardioides panacis: KRR39_04210
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Entry
KRR39_04210 CDS
T08276
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
nps
Nocardioides panacis
Pathway
nps03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KRR39_04210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nps03000
]
KRR39_04210
03400 DNA repair and recombination proteins [BR:
nps03400
]
KRR39_04210
Enzymes [BR:
nps01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
KRR39_04210
Transcription factors [BR:
nps03000
]
Prokaryotic type
Helix-turn-helix
AraC family
KRR39_04210
DNA repair and recombination proteins [BR:
nps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KRR39_04210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
QWZ09035
UniProt:
A0A975Y115
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All DBs
Position
842484..844001
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AA seq
505 aa
AA seq
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MDIEDTEACYRAVKSRDRRFDGVFYTGVTSTGIYCRPSCPAITPARRNVTFHRTAAAAQA
AGFQACKRCLPDATPGSPDWDVAADAAGRAMRLIADGVVERDGVDGLAARVGYTPRHLQR
LLAAELGAGPLALARARRAQNARILIETTAMPFADVAFAAGFASIRQFNDTVREVYASTP
TELRGRSRRAVTTPGRIDLRLPVRVPYAGGEVLRFLAAHLVPGVEQCGPDWYARTLTLPH
GDGHVRLVFPPDDPHAGAAATTFVRCELTVHDLRDVGAAVERCRRLLDADCDPIAVDDGL
SDDPRMAALVRQRPGLRVPGSVDGDEIAIRAVIGQQISLAGAISLGGKLVARYGADSAAG
STCGGPGRLFPTAGALAAADPGELPMPRARGRALVGLCRALADGEVPLDRSADRAEVRAR
LLALPGIGPWTADYVALRALGDPDVFLPTDIGVRRALTDRGDDPTLAARAAERWRPWRSY
GLMHLWSTLDLRPARSTTPDTVKEN
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggacatcgaggacaccgaggcctgctaccgggcggtgaagagccgggaccggcgcttc
gacggggtcttctacaccggggtcacctcgaccggcatctactgccggccctcctgcccg
gcgatcacgccggcccgccgcaacgtgaccttccaccgcaccgccgccgccgcgcaggcc
gccggcttccaggcctgcaagcgctgcctgccggacgcgacgcccggctccccggactgg
gacgtcgcggccgacgcggccggccgggcgatgcggctgatcgccgacggcgtggtcgag
cgcgacggagtcgacggcctcgccgcccgggtcggctacaccccgcggcacctgcagcgg
ctgctcgccgccgagctcggggcgggcccgctcgccctggcccgggcccgccgcgcgcag
aacgcccggatcctgatcgagaccacggcgatgccgttcgccgacgtcgccttcgcggcc
ggcttcgcgagcatccggcagttcaacgacaccgtgcgcgaggtgtacgccagcacgccc
accgagctgcggggacgctcccgtcgggccgtgacgaccccgggccgcatcgacctgcgg
ctgccggtgcgggtgccgtacgccgggggagaggtgctgcggttcctggccgcgcacctg
gtgccgggcgtcgagcagtgcggcccggactggtacgcccgcacgctgacgctgccgcac
ggcgacggccacgtgcggctggtgttcccgcccgacgacccgcacgccggggcggccgcg
acgaccttcgtgcgctgcgagctgaccgtgcacgacctgcgcgacgtgggggctgccgtg
gagcgctgccgccgcctgctggacgcggactgcgacccgatcgcggtcgacgacgggctc
tccgacgacccgcggatggccgcgctcgtccggcagcggccggggctgcgggtgccgggg
agcgtcgacggcgacgagatcgcgatccgggccgtgatcggccagcagatctcgctggcc
ggggcgatctcgctcggcggcaagctggtcgcgcgctacggcgcggacagcgccgccggg
tcgacgtgcggcgggcccggacggctgttccccaccgccggggcgctggccgcggcggac
cccggggagctgccgatgccgcgggcgcggggacgggccctggtcggcctgtgccgggcg
ctggccgacggcgaggtgcccctggaccgcagcgccgaccgcgccgaggtgcgggcccgg
ctgctcgccctgcccgggatcgggccctggaccgccgactacgtcgcgctgcgcgcgctc
ggcgaccccgacgtcttcctgcccaccgacatcggcgtgcgccgcgcgctgaccgaccgg
ggcgacgaccccacgctggccgcccgggccgcggagagatggcgcccctggcgctcctac
gggctgatgcacctgtggtcgaccctcgacctcaggccggcccgcagcaccacccccgac
accgtgaaggagaactga
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