Nocardioides panacis: KRR39_04780
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Entry
KRR39_04780 CDS
T08276
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nps
Nocardioides panacis
Brite
KEGG Orthology (KO) [BR:
nps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nps03016
]
KRR39_04780 (truB)
Enzymes [BR:
nps01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KRR39_04780 (truB)
Transfer RNA biogenesis [BR:
nps03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KRR39_04780 (truB)
Prokaryotic type
KRR39_04780 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QWZ09127
UniProt:
A0A975Y142
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All DBs
Position
962116..962994
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AA seq
292 aa
AA seq
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MSAEGQAGLVVVDKPAGMTSHDVVARIRRLAGTRKVGHAGTLDPMATGVLLVGVNRATRL
LGHLTLTEKAYDATVRLGASTSTDDAEGETLTTASVEHLTEDDVRSAAGRFVGALEQKPS
AVSAIKVDGKRAYARVRDGEDVDLPARPVTVHELLVTDVRPADGFLDVDVSVRCSSGTYI
RAIARDLGAELGTGGHLTALRRTAVGPFTLAEAHGLDALAERFDLVDVSDVARRCFATYD
LSEDEARDVGYGRKLSTVVGEPAPVAVFDGSGRFLALYEQRGEVAAPVAVFS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccgagggacaggccgggctcgtcgtcgtcgacaagccggccgggatgacctcg
cacgacgtggtcgcccggatccggcggctcgccggcacccgcaaggtcgggcacgccggc
acactggacccgatggccaccggcgtgctgctggtcggggtcaaccgggccacccggctg
ctcggccacctcaccctgaccgagaaggcgtacgacgccacggtgcggctcggggcgagc
accagcaccgacgacgcggagggggagaccctgacgaccgcgtcggtggagcacctcacc
gaggacgacgtgcggtcggcggcgggccggttcgttggtgccctcgagcagaagccgtcg
gcggtctccgcgatcaaggtggacggcaagcgcgcctacgcccgggtccgtgacggcgag
gacgtcgacctcccggcgcgacccgtcaccgtccacgagctgctggtcaccgacgtgcgc
cccgccgacggcttcctcgacgtggacgtctcggtgcgctgcagcagcggcacctacatc
cgggcgatcgcccgcgacctcggcgccgagctcggcaccggcggccacctcaccgcgctg
cgccgtacggcggtcgggccgttcacgctcgccgaggcgcacggcctcgacgccctcgcg
gagcggttcgacctggtggacgtctccgacgtggcccggcgctgcttcgcgacgtacgac
ctgagcgaggacgaggcgcgtgacgtcggctacggccgcaagctctccacggtcgtcggc
gagcccgccccggtggcggtcttcgacggatccgggaggttcctcgcgctctacgagcag
cggggtgaggtcgccgcccccgtcgcggtgttctcctag
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