Nocardioides panacis: KRR39_04835
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Entry
KRR39_04835 CDS
T08276
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
nps
Nocardioides panacis
Pathway
nps03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KRR39_04835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nps03019
]
KRR39_04835
03016 Transfer RNA biogenesis [BR:
nps03016
]
KRR39_04835
Enzymes [BR:
nps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KRR39_04835
Messenger RNA biogenesis [BR:
nps03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KRR39_04835
Transfer RNA biogenesis [BR:
nps03016
]
Prokaryotic type
tRNA degradation factors
KRR39_04835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QWZ09136
UniProt:
A0A975T0A1
LinkDB
All DBs
Position
974714..976936
Genome browser
AA seq
740 aa
AA seq
DB search
MTEGPEIYAVETVLDNGKFGTRTVKFESGFLARQAAGSVTAYLDDETMLLSATTASKHPK
DHFDFFPLTIDVEERMYAVGQIPGSFFRSEGRPGEDAILTCRLIDRPLRPTFKKGLRNEV
QVVITVLALDPDQPYDVLAINAASMSTQLSGLPFSGPVGGVRVALIEGQWVAFPSHSQLE
DAVFDMVVAGRVTETGDVAIMMVEAEATERTFELVQGGVQAPTEEVVAGGLDAAKPFIKQ
LIEAQVELAKQAAKPIKDFPIFLDYEDDAYDAVEKAAQTDLSAALTIPGKLDRESRMDEI
KDTVLEKLGADFEGREKELGAAFRSLTKKLVRERVLRDKVRIDGRGLTDIRTLSAEVGVI
PRVHGSALFERGETQILGVTTLNMLSLEQKLDTLSPEKSRRYMHKYVFPPYSTGETGRVG
SPKRREVGHGALARRALLPVLPTREEFPYAIRQLSEAMGSNGSTSMGSVCASTLSLLQAG
VPLKAPVAGIAMGLISGEVDGKTEYVAITDILGAEDAFGDMDFKVAGTPEFVTALQLDTK
LDGIPADVLAAALTQAKDARMSILEVMAEAISTPEEMSLHAPRIITVKIPVDKIGEVIGP
KGKMINQIQDDTGAQISIEDDGTIYIGATNGESAEAARSIINGIANPTMPEVGERYLGTV
VKTTNFGAFISLLPGKDGLLHISKLRGLAGGKRVENVEDVVSVGQKIQVEIGEIDDRGKL
SLIPVLDESAEAESADESAE
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
gtgactgagggacccgagatctacgcagtcgagacggttctcgacaacggcaagttcggc
acccgcaccgtcaagttcgagtcgggcttcctggcccggcaggccgccggttcggtgacc
gcctacctcgacgacgagacgatgctgctgtcggccaccacggccagcaagcaccccaag
gaccacttcgacttcttccccctcacgatcgacgtggaggagcggatgtacgccgtgggc
cagatccccggctcgttcttccgcagcgagggccgtccgggcgaggacgccatcctcacc
tgccggctgatcgaccggccgctgcgcccgaccttcaagaagggtctgcgcaacgaggtc
caggtcgtcatcaccgtgctggcgctcgaccccgaccagccgtacgacgtgctggccatc
aacgcggcctcgatgtccacccagctctccggcctgccgttctccggcccggtcggcggc
gtgcgcgtcgcgctgatcgagggccagtgggtcgccttcccctcgcactcgcagctcgag
gacgccgtgttcgacatggtcgtcgcgggccgggtcaccgagaccggcgacgtcgcgatc
atgatggtcgaggcggaggccaccgagcgcaccttcgagctcgtgcagggcggcgtccag
gcgccgaccgaggaggtcgtggccggtggcctcgacgccgcgaagcccttcatcaagcag
ctcatcgaggcccaggtcgagctggccaagcaggccgcgaagccgatcaaggacttcccg
atcttcctcgactacgaggacgacgcctacgacgccgtcgagaaggccgcccagacggac
ctctccgccgccctcacgatccccggcaagctggaccgcgagtcccgcatggacgagatc
aaggacaccgtgctggagaagctcggtgccgacttcgagggtcgcgagaaggagctcggc
gccgcgttccggtcgctgaccaagaagctggtgcgcgagcgcgtgctgcgcgacaaggtc
cgcatcgacggccgtggcctcaccgacatccggacgctgtccgccgaggtcggcgtgatc
ccgcgggtgcacggctcggcgctgttcgagcgcggcgagacccagatcctgggtgtcacg
acgctgaacatgctgtccctcgagcagaagctcgacacgctctccccggagaagtcgcgt
cggtacatgcacaagtacgtcttcccgccctactccaccggtgagaccggtcgggtgggt
tcgccgaagcgtcgcgaggtcggccacggtgcgctcgcgcgccgcgcgctgctcccggtg
ctgccgacgcgtgaggagttcccctacgcgatccgtcagctctccgaggcgatgggctcc
aacggctccacctcgatgggctcggtctgcgcctcgaccctgtcgctgctgcaggccggt
gtgccgctgaaggcccccgtcgccggcatcgcgatgggcctcatctccggtgaggtcgac
ggcaagaccgagtacgtcgcgatcaccgacatcctcggcgccgaggacgcgttcggcgac
atggacttcaaggtcgccggcacgccggagttcgtcaccgccctgcagctcgacaccaag
ctcgacggcatccccgccgacgtgctggccgccgcgctgacccaggccaaggacgcccgg
atgtccatcctcgaggtgatggccgaggccatctccacccccgaggagatgtcgctgcac
gccccgcggatcatcaccgtgaagatccccgtggacaagatcggcgaggtcatcgggccc
aagggcaagatgatcaaccagatccaggacgacaccggcgcccagatcagcatcgaggac
gacggcacgatctacatcggcgccaccaacggcgagtccgccgaggcggcccggtcgatc
atcaacgggatcgcgaacccgaccatgcccgaggtcggcgagcgctacctcggcacggtc
gtcaagacgacgaacttcggcgccttcatctcgctgctccccggcaaggacggactgctg
cacatcagcaagctccgcggcctcgccggcggcaagcgcgtggagaacgtcgaggacgtg
gtctccgtcggccagaagatccaggtcgagatcggcgagatcgacgaccggggcaagctg
tccctgatcccggtcctcgacgagtccgccgaggccgagtccgccgacgagtccgccgag
taa
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