Nocardioides panacis: KRR39_08990
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Entry
KRR39_08990 CDS
T08276
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nps
Nocardioides panacis
Pathway
nps03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KRR39_08990 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nps03019
]
KRR39_08990 (groL)
03110 Chaperones and folding catalysts [BR:
nps03110
]
KRR39_08990 (groL)
03029 Mitochondrial biogenesis [BR:
nps03029
]
KRR39_08990 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nps04147
]
KRR39_08990 (groL)
Enzymes [BR:
nps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
KRR39_08990 (groL)
Messenger RNA biogenesis [BR:
nps03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
KRR39_08990 (groL)
Chaperones and folding catalysts [BR:
nps03110
]
Heat shock proteins
HSP60 / Chaperonin
KRR39_08990 (groL)
Mitochondrial biogenesis [BR:
nps03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
KRR39_08990 (groL)
Exosome [BR:
nps04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
KRR39_08990 (groL)
Exosomal proteins of other body fluids (saliva and urine)
KRR39_08990 (groL)
Exosomal proteins of breast cancer cells
KRR39_08990 (groL)
Exosomal proteins of colorectal cancer cells
KRR39_08990 (groL)
Exosomal proteins of bladder cancer cells
KRR39_08990 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QWZ09842
UniProt:
A0A975T1H2
LinkDB
All DBs
Position
complement(1854561..1856252)
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AA seq
563 aa
AA seq
DB search
MAKELRFGEDARALLLSGVEQLAEAVKSTLGPKGRNVVLERITGSPVVTNDGVTIAREVH
LGDPFENMGAQLVKEAAIKTNDIVGDGTTTATVIAHAIIREGISAIARGGNPVLVKRGVD
LAVSRLVEQLAKVAHPVVSEEDYKRVAAISANDDDVVGAVLAHALHTVGDRGIVTVTESP
VNGMSVDFVEGFEYDNGYLSPYLVTHPASLEAVLDDPYILLCSEKISKVQQLMPLLDKVM
REPRPLVVIAETVDGSALSMLVHNHVNGVFRCVATKAPGFGDRRLRKLEDIATITGGEVF
SKHSGFSLENMTLAQMGRARQVRVTADRTTIIGGAGSQDAIEFRLAQLRSEMDRATFGID
EDVLTERIGSLSGKVAVIRVGAPTNAELAELQHRVEDALSATRAAMAEGIVAGGGSALVH
AAPVLDDLQVNDDYAIGVDIVRRALSEPMYLIATNAGYPGHEVVAKVSEMGVDDGFDALE
GRYGDMIEMGIIDPLRVCRSALENGASVAGLLLTTNTLIAEEQTPWGGSRALMTEFGELD
EGLHQPSPDSSTPQSLGLGPSVG
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggagcttcgattcggtgaggacgcacgggcgcttctgctctcgggcgtcgaa
cagctggcggaggcggtgaagtcgaccctcgggccgaaggggcgcaacgtggtgctcgaa
cggatcacggggtcgccggtggtgaccaacgacggtgtgacgatcgcccgcgaggtgcac
ctcggcgacccgttcgagaacatgggcgcccagctggtcaaggaagccgcgatcaagacc
aacgacatcgtcggcgacggtacgacgaccgcgaccgtgatcgcccacgcgatcatccgc
gaaggcatcagcgccatcgcccgcggtggcaacccggtgctcgtcaagcgcggcgtcgac
ctcgccgtctcccggctggtcgagcagctcgccaaggtcgcgcacccggtggtcagcgag
gaggactacaagcgggtggccgcgatctccgcgaacgacgacgacgtggtcggtgcggtg
ctggcgcacgcgctgcacaccgtcggcgaccgcggcatcgtcacggtgaccgagtccccg
gtgaacggcatgagcgtggacttcgtcgagggcttcgagtacgacaacggctacctctcg
ccgtacctcgtcacgcacccggccagcctggaggcggtgctcgacgacccctacatcctg
ctgtgcagcgagaagatctcgaaggtccagcagctgatgccgctgctggacaaggtgatg
cgcgagccgcggccactggtcgtcatcgccgagacagtcgacggctcggccctgagcatg
ctggtgcacaaccacgtcaacggcgtcttccgctgcgtggccaccaaggcgcccggcttc
ggcgaccgccggctgcgcaagctggaggacatcgccacgatcaccggcggcgaggtgttc
agcaagcactccggcttcagcctggagaacatgaccctggcgcagatgggccgcgcccgg
caggtccgggtcaccgcggaccgcaccacgatcatcggcggtgccggctcccaggacgcg
atcgagttccggctggcgcagctgcgctcggagatggaccgggccaccttcggcatcgac
gaggacgtgctcaccgagcggatcggctcgctgtccggcaaggtggccgtgatccgggtc
ggtgcacccacgaacgctgagctcgccgagctgcagcaccgggtcgaggacgcgctgtcc
gcgacccgggccgcgatggccgagggcatcgtcgccggcggcggctcggcactggtgcac
gccgccccggtgctcgacgacctgcaggtcaacgacgactacgcgatcggcgtcgacatc
gtgcgccgggcgctgagcgagccgatgtacctgatcgccaccaacgccgggtaccccggc
cacgaggtggtcgccaaggtctcggagatgggagtcgacgacggcttcgacgccctcgag
ggccgctacggcgacatgatcgagatgggcatcatcgacccgctgcgggtgtgccgctcg
gccctggagaacggtgcgtccgtcgccggcctgctgctcaccaccaacaccctgatcgcc
gaggagcagaccccgtggggcggcagccgcgcgctgatgaccgagttcggcgagctggac
gaagggctgcaccagccctcaccggactcgagcacgccgcagtcgctcggcctgggcccc
tcggtcggctga
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