Nocardioides panacis: KRR39_09450
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Entry
KRR39_09450 CDS
T08276
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
nps
Nocardioides panacis
Brite
KEGG Orthology (KO) [BR:
nps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nps03016
]
KRR39_09450 (thpR)
Enzymes [BR:
nps01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
KRR39_09450 (thpR)
Transfer RNA biogenesis [BR:
nps03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
KRR39_09450 (thpR)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QWZ09927
UniProt:
A0A975T1Y9
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All DBs
Position
1941564..1942139
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AA seq
191 aa
AA seq
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MRMFVALVPPPDALDDLAEFVGPRQEAEPGFRWTTPEQWHVTLAFLADVADRHLDDLVVR
LGRAAARRTPFEVTLAAGGAFPDPSRARVLFTGVETSSESGGQELHRLATGARAAAAKAG
CEVDGGRFHPHVTLARTRRPVQATRWLRVLDAYRGPTWTAGEMTLVASHLGEGPRRRPRY
ELVESFPLARG
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgcggatgttcgtcgccctggtcccgccgcccgacgccctcgacgacctggcggagttc
gtcggtccgcgccaggaggccgagcccgggttccggtggaccacgcccgagcagtggcac
gtcaccttggcgttcctggccgacgtcgccgaccggcacctcgacgacctcgtcgtccgg
ctggggcgggccgccgctcgacgtacgccgttcgaggtgacgctcgcggcaggcggagcg
ttcccggacccgagccgggccagggtgctcttcacgggggtggagacgtcgtcagagagc
gggggccaggagctccaccggctggcgacgggagcacgggccgccgcggcgaaggccggc
tgcgaggtggacggcggccggttccacccgcacgtcacgctcgcgcgcacccgtcggccg
gtgcaggccacccgctggctgcgcgtgctggacgcctaccgcggcccgacctggactgcc
ggcgagatgacgctcgtcgcgtcccacctcggtgagggcccgcgtcgccggccgcgctac
gagctcgtcgagagcttcccgctcgcgcgcgggtga
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