Nocardioides panacis: KRR39_12200
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Entry
KRR39_12200 CDS
T08276
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nps
Nocardioides panacis
Pathway
nps03030
DNA replication
nps03430
Mismatch repair
nps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KRR39_12200
03430 Mismatch repair
KRR39_12200
03440 Homologous recombination
KRR39_12200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nps03032
]
KRR39_12200
03400 DNA repair and recombination proteins [BR:
nps03400
]
KRR39_12200
Enzymes [BR:
nps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KRR39_12200
DNA replication proteins [BR:
nps03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KRR39_12200
DNA repair and recombination proteins [BR:
nps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KRR39_12200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
UVR
DEDDh_C
DUF7508
XdhC_C
Motif
Other DBs
NCBI-ProteinID:
QWZ06373
UniProt:
A0A975SV33
LinkDB
All DBs
Position
2520847..2522634
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AA seq
595 aa
AA seq
DB search
MSQTATTPPDGRARWESQRSFDELGRNLRDVTFCVVDLETTGGSAAAGSMITEVGAVKVR
GGEVLGEFQTLVNPHLAIPPFIAVLTGITDSMVAGAPRIEQVLPQFLEFAQGCVLVAHNA
PFDVGFLRHFAEQQGRPWPRFEVLDTAKLARRVVTRDEAPNCKLSSLAVLFGAGTTPNHR
ALSDARATVDVLHGLMGRLGNLGVHTLEELQTFSARVTSAQRRKRHLAEPLPHAPGVYLF
EDDRGRVLYIGTSRDLRTRVRTYFTASETRTRMGEMVGLAASVRGIECATPLEAEVRELR
LIAQHKPRYNRRSRFPERVHWVKLTREPWPRLSLVRHVLDDDADYVGPYSSKRAAERSVA
ALHEAFPIRQCGGRMPKVPALSACALAEMGKCLSPCNGSVAPTEYAAVVDRLRDTLLAGS
EPVVASVSVRMTALAEDQRFEDAGSWRDRLVSFLRGAARTQRLRALTGCEELVAARREST
GWAVHVVRHGRLVAAGVIPSGVQAGTWVDQLRASAETVVAGPGPTPAATAEETEKILRWL
ESDGVRLVHVVGEWTCPVGGATKHLRVHDAVESSRASVAPFDDPRGLRPEHRPVR
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgagccagacagccacgacgccgcccgacggccgggcgcggtgggagtcgcagcgcagc
ttcgacgagctcggccgcaacctccgcgacgtgacgttctgcgtggtcgacctggagacg
accggcgggtccgcggcggccgggtcgatgatcaccgaggtcggcgccgtcaaggtccgg
ggcggcgaggtgctcggcgagttccagaccctggtcaacccgcacctcgcgatcccgccg
ttcatcgccgtgctgaccggcatcaccgactcgatggtggccggcgcgccgcggatcgag
caggtgctcccccagttcctggagttcgcccagggctgcgtgctcgtcgcccacaacgcg
ccgttcgacgtgggcttcctgcggcacttcgcggagcagcagggccggccctggccgcgc
ttcgaggtcctcgacaccgccaagctcgcgcgccgggtggtcacccgcgacgaggccccc
aactgcaagctcagctccctcgcggtgctgttcggtgcgggcacgaccccgaaccaccga
gcgctctccgacgcgcgcgccaccgtcgacgtgctgcacgggctgatgggccggctcggc
aacctcggcgtgcacaccctcgaggagctccagacgttcagcgcccgggtgacctccgcc
cagcgtcgcaagcggcaccttgcggagccgctgccgcacgccccgggggtctacctcttc
gaggacgaccgggggcgggtgctctacatcggcaccagccgcgacctgcggacccgggtg
cgcacctacttcaccgcctcggagacccggacccggatgggcgagatggtcggcctggcg
gcgagcgtgcggggcatcgagtgcgcgaccccgctcgaggccgaggtccgcgagctccgg
ctgatcgcccagcacaagccccgttacaaccgccgctcgcgcttccccgagcgggtgcac
tgggtcaagctgacccgggagccgtggccccggctgtccctggtccggcacgtgctcgac
gacgacgccgactacgtcggcccctactcctccaagcgggctgcggagcggtccgtcgcg
gccctgcacgaggcgttcccgatccggcagtgcggcggccggatgcccaaggtccccgcg
ctgagcgcctgcgcgctggccgagatgggcaagtgcctgtcgccgtgcaacggcagcgtc
gcccccaccgagtacgccgccgtcgtggaccgcctgcgcgacaccctgctggccggctcg
gagccggtcgtcgcctcggtctcggtccggatgacggcgctcgccgaggaccagcggttc
gaggacgccgggtcctggcgcgaccggctggtgtcgttcctgcgcggcgccgcccgcacc
cagcggctgcgggcgctgaccggctgcgaggagctcgtcgcggcccggcgcgagagcacc
ggctgggccgtccacgtggtccggcacggccggctggtcgccgccggggtcatcccctcc
ggcgtgcaggccggcacctgggtggaccagctccgggcgtccgcggagaccgtggtcgcc
ggtcccggtcccaccccggccgccaccgccgaggagaccgagaagatcctgcgctggctg
gagtccgacggggtccggctggtgcacgtcgtgggcgagtggacctgcccggtcggcggc
gcgaccaagcatctgcgcgtgcacgacgcggtcgagtcctcccgcgcctcggtcgccccg
ttcgacgaccctcgcggactgcgtcccgagcaccggccggtccgctag
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