Nocardioides panacis: KRR39_19610
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Entry
KRR39_19610 CDS
T08276
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nps
Nocardioides panacis
Pathway
nps03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KRR39_19610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nps03400
]
KRR39_19610
Enzymes [BR:
nps01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
KRR39_19610
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KRR39_19610
DNA repair and recombination proteins [BR:
nps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KRR39_19610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Ribosomal_S13
Zn_ribbon_RRN7
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QWZ07605
UniProt:
A0A975SY75
LinkDB
All DBs
Position
3995440..3996306
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AA seq
288 aa
AA seq
DB search
MPELPEVEGLALDLAGRLDGRAIARVDIAAFSALKTFDPPLSALQGSFVDGVTRHGKFID
ISAGGLHLVMHLARGGWVRWREEVPALPPKPSNKSPMAARVHLDDGSGLDITEAGTKKRL
ALYVVRDPGDIPGIASLGPDPLDEAFTIDVLGGILQAAGRAQVKGVLRHQGTIAGIGNAY
SDELLHAARMSPFKPASSITGDDLQTLYDAIRTILGDAVARSRGLHAADLKSEKKSNLAV
HGRTGLPCPVCGDTVREVSFADSSLQYCPTCQTGGKPLADRRMSRLLK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctgcccgaagtggaaggactggcgctcgacctcgccggtcgactcgacgga
cgcgccatcgcgcgcgtcgacatcgccgcgttcagcgcgctgaagaccttcgacccgcca
ctgtccgccctgcagggcagcttcgtggacggcgtgacccggcacggcaagttcatcgac
atcagcgccggcggcctgcacctcgtgatgcacctggcccgcggcggctgggtgcgctgg
cgcgaggaggtgccggcgctgccgcccaagccgagcaacaagtcgccgatggccgcgcgg
gtgcacctcgacgacggctccggcctcgacatcaccgaggccggcaccaagaagcgcctc
gccctgtacgtcgtccgcgaccccggcgacatcccgggcatcgccagcctcgggcccgac
ccgctcgacgaggcgttcaccatcgacgtgctcggcggcatcctgcaggccgccggccgg
gcgcaggtcaagggcgtgctgcggcaccagggcacgatcgccggcatcggcaacgcctac
tccgacgagctgctgcacgccgcgcggatgtcgccgttcaagcccgcctcgagcatcacc
ggcgacgacctgcagaccctgtacgacgcgatccgcacgatcctcggcgacgcggtggcc
cggtcgcgggggctgcacgccgccgacctcaagagcgagaagaagagcaacctcgccgtg
cacggccgcaccgggctgccctgcccggtgtgcggcgacaccgtgcgcgaggtgtcgttc
gcggactcctcgctgcagtactgccccacctgccagaccggtggcaagcctctcgccgac
cgccggatgtcccggctgctcaagtag
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