Nocardioides panacis: KRR39_20040
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Entry
KRR39_20040 CDS
T08276
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
nps
Nocardioides panacis
Brite
KEGG Orthology (KO) [BR:
nps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nps03032
]
KRR39_20040 (gyrB)
03400 DNA repair and recombination proteins [BR:
nps03400
]
KRR39_20040 (gyrB)
Enzymes [BR:
nps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KRR39_20040 (gyrB)
DNA replication proteins [BR:
nps03032
]
Prokaryotic type
DNA Topoisomerases
KRR39_20040 (gyrB)
DNA repair and recombination proteins [BR:
nps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KRR39_20040 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QWZ07669
UniProt:
A0A975XZV5
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All DBs
Position
complement(4084200..4086260)
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AA seq
686 aa
AA seq
DB search
MGESHAVEEGKYDASAIQVLEGLEAVRKRPGMYIGSTGERGLHHLVWEIVDNSVDESLAG
YATSIKVTLQEDGGVRVEDNGRGIPTDTAPGQDMPAVTMALTMLHAGGKFGGGGYKVSGG
LHGVGVSVVNALSSTLQVDVRNRGYHWRQTFSLGVPDGPLEQLEPLGPDEQTGTTVTYWA
SEDIFETTTYSLETITNRLREMAFLNKGLEIIIRDERAHMAGVADAIAEDAEGAATHDPD
APVVDRSSAVEGVIEHRFCFDRGLVDYVEHLNRRKDKANASVIAFDAELPESGMSLEVAM
QWNTTFSESVHTFANTINTHEGGTHEEGFRSALTSLVNNWGEEWNLIKKKEDRVSGDDVR
EGLTAIISIKLGEPQFEGQTKTKLGNTEAKGFVQRVVNEQLGAWLEKNPAEGRDIVRKAQ
AAASARIAARKARDLARSRKGLLGGGGLPGKLADCQSTNPEECEIFVVEGDSAGGSAKGG
RDPRIQAILPIRGKILNVEKARLDKVLANTEVQAIISALGTGIHEEFDIDKVRYHKIVMM
ADADVDGHHIRTLLLTLLFRFMKPLIEHGYVYLAQPPLYRLRWNKPAEHEFVYSDAERDA
MVRVGQESGKKLPKENAIQRYKGLGEMNANELWETTMDPDNRLLLQVTLEDAAQADEMFS
VLMGEDVEQRRSFIQRNAKDVRFLDI
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagagccacgcggtcgaggagggcaagtacgacgcctccgcgatccaggtcctc
gagggtctcgaggcggtccgcaagcgcccgggcatgtacatcggctccaccggcgagcgc
ggcctgcaccacctggtctgggagatcgtcgacaactccgtcgacgagtcgctggccggc
tacgccaccagcatcaaggtgacgctgcaggaggacggcggcgtccgggtcgaggacaac
ggccgcggcatccccaccgacaccgcgcccggccaggacatgccggccgtgacgatggcg
ctgacgatgctgcacgccggcggcaagttcggcggcggcggctacaaggtctccggcggt
ctgcacggcgtgggcgtctcggtcgtcaacgcgctcagcagcaccctgcaggtcgacgtg
cgcaaccgtggctaccactggcggcagaccttcagcctcggcgtgcccgacggccccctc
gagcagctcgagccgctcggccccgacgagcagaccggtacgacggtcacctactgggcc
agcgaggacatcttcgagaccacgacgtactccctcgagacgatcaccaaccggctccgg
gagatggccttcctcaacaagggcctcgagatcatcatccgcgacgagcgggcgcacatg
gcgggcgtcgccgacgcgatcgccgaggacgccgagggcgcggccacgcacgacccggac
gcaccggtggtggaccggtcgagcgccgtcgagggcgtcatcgagcaccggttctgcttc
gaccgcggcctggtggactacgtcgagcacctgaaccgccgcaaggacaaggccaacgcc
agcgtgatcgcgttcgacgccgagctgcccgagagcgggatgagcctcgaggtcgcgatg
cagtggaacaccacgttctccgagtcggtgcacaccttcgcgaacaccatcaacacccac
gagggcggcacccacgaggagggcttccgctccgcgctcacgtccctggtgaacaactgg
ggcgaggagtggaacctgatcaagaagaaggaggaccgggtctccggcgacgacgtccgc
gagggcctcaccgcgatcatctcgatcaagctcggcgagccgcagttcgagggccagacg
aagaccaagctcggcaacaccgaggccaagggcttcgtccagcgcgtggtcaacgagcag
ctcggcgcctggctggagaagaacccggccgagggccgcgacatcgtccgcaaggcgcag
gccgcggcgtccgcccggatcgcggcccgcaaggcccgcgacctggcgcgcagccgcaag
ggcctgctcggcggcggcggcctgcccggcaagctcgccgactgccagtcgaccaacccc
gaggagtgcgagatcttcgtggtcgagggcgactcggccggtggctccgccaagggtggc
cgggacccgcgcatccaggcgatcctgccgatccgcggcaagatcctgaacgtcgagaag
gcccgcctggacaaggtgctggccaacaccgaggtgcaggcgatcatctccgcgctcggc
accggcatccacgaagagttcgacatcgacaaggtccgctaccacaagatcgtgatgatg
gccgacgccgacgtggacggccaccacatccggaccctgctgctgaccctgctgttccgg
ttcatgaagccgctcatcgagcacggctacgtctacctcgcgcagccgccgctctaccgg
ctgcgctggaacaagccggccgagcacgagttcgtctactccgacgccgagcgcgacgcg
atggtgcgggtcggccaggagtcgggcaagaagctgcccaaggagaacgccatccagcgc
tacaagggcctgggcgagatgaacgccaacgagctgtgggagaccacgatggacccggac
aaccggctcctgctccaggtcaccctcgaggacgcggcgcaggccgacgagatgttctcg
gtgctgatgggcgaggacgtcgagcagcggcgctcgttcatccagcgcaacgccaaggac
gtccgcttcctcgacatctga
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