Nocardioides panacis: KRR39_22425
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Entry
KRR39_22425 CDS
T08276
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
nps
Nocardioides panacis
Brite
KEGG Orthology (KO) [BR:
nps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nps03032
]
KRR39_22425
03036 Chromosome and associated proteins [BR:
nps03036
]
KRR39_22425
03400 DNA repair and recombination proteins [BR:
nps03400
]
KRR39_22425
DNA replication proteins [BR:
nps03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KRR39_22425
Chromosome and associated proteins [BR:
nps03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KRR39_22425
DNA repair and recombination proteins [BR:
nps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KRR39_22425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
SSPI
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
QWZ08062
UniProt:
A0A975Y035
LinkDB
All DBs
Position
4606175..4606489
Genome browser
AA seq
104 aa
AA seq
DB search
MNKREFVDAIIEKTGWSRRESELALATVLDTISDSVANGDKVTLPGFGTFEKRERAAREG
RNPQTGAVVKIKKTNVPAFKAGATLKTYVAASKKDQAAFRKNRG
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagagagagttcgtcgacgccatcatcgagaagaccggctggtcgcggcgcgag
tccgagctcgccctcgccaccgtgctcgacaccatcagcgactcggtcgcgaacggtgac
aaggtgacgctgcccggcttcggcaccttcgagaagcgcgagcgggcggcgcgtgagggc
cgcaacccgcagaccggtgcggtggtcaagatcaagaagaccaacgtgcccgcgttcaag
gccggtgccaccctgaagacgtacgtcgcggcctcgaagaaggaccaggccgcgttccgc
aagaaccggggctga
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