Neodiprion pinetum (white pine sawfly): 124211157
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Entry
124211157 CDS
T08966
Symbol
TfIIFalpha
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X2
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124211157 (TfIIFalpha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npt03021
]
124211157 (TfIIFalpha)
Transcription machinery [BR:
npt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
124211157 (TfIIFalpha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
124211157
NCBI-ProteinID:
XP_046465907
LinkDB
All DBs
Position
2:complement(25437987..25446238)
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AA seq
533 aa
AA seq
DB search
MPGAVPSVQEYSIRVPKNSKKKHNVMRFNATLNVDFSKWSQVKMERENNMKEYKGMDEEM
PKFGAGSEFGRDAREEARRKKFGITSRKYKPEDQPWILKSGGKTGKKFKGIREGGVSENA
AYYVFTHAPDGAIEAFPLHEWYNFQPIQRYKALSAEEAEQEFSRRNRVMNYFSLMMRKRM
RNDDEGAEDDPELSEGGKGKKLGKKEKELKISEMDEWMDSDDDDSSSDEDKEKKNSEEEE
DDKKKKKKAKEEAQKKKKKKKKGSDDEAFEESDDGDEEGRECDYISDSSDSESELEQQKE
IKSVAEEDALRKLLASDEDSQGEENEEEKKDGEDDKDDDEDNKDKDEKEKDNKLNKESDK
KKDKKKKKKQSKKKDVKKSGIGKDSSSDFSSDSGSDSDIPREKDSKKPNSAQSSRSVTPV
LPGVSADCFKRKQSGSPDLSQSKKIKLDNFNSAPVTSYFPGASESGITEDAVRRYLMRKP
MTTTELLQKFKSKKTGLTSEQLVNVMTQILKKINPVKQTIKNKMYLSIKAQHN
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcctggcgcagtaccttcggtacaagaatacagcatcagagttccaaagaacagtaaa
aaaaagcacaatgtcatgcgatttaatgcaacactcaatgttgacttttcaaaatggtcg
caagtcaagatggagcgtgaaaataacatgaaagagtataaaggaatggatgaggagatg
ccaaagtttggagcaggatccgagtttggtcgcgacgcaagagaagaagcaaggcgaaaa
aagtttggaataacaagtagaaaatacaaaccagaagatcagccttggattcttaaatca
ggaggtaaaacagggaagaagttcaaaggaattcgagaaggtggagtcagtgagaatgca
gcatactatgttttcactcatgcacccgatggtgccattgaagcatttcctttgcatgaa
tggtataatttccagccaatacaaagatataaagctttgagtgctgaagaagctgagcaa
gagtttagtaggcggaatagagtcatgaattacttttcattaatgatgcgaaagagaatg
cgaaacgacgacgaaggcgccgaagatgatccagaattatctgaaggtggtaaaggaaaa
aaacttggtaaaaaagaaaaggaattgaaaatatcagaaatggatgaatggatggatagt
gacgatgatgattcgagttctgacgaagacaaggagaaaaagaattctgaagaagaagag
gatgataaaaaaaagaaaaaaaaagctaaggaggaagcacaaaaaaagaagaaaaagaag
aagaaggggtcggatgacgaagcatttgaagaaagtgacgatggagatgaagaggggaga
gagtgtgattatatatctgactcttcagattctgaatcagaattggaacaacaaaaggaa
ataaaatctgtggctgaagaagatgctctacgaaagcttcttgcttcagatgaggatagt
caaggggaggagaatgaggaggaaaagaaggatggagaagatgacaaagatgatgatgag
gacaacaaagacaaagatgagaaggaaaaagacaacaaactcaataaggagtccgataaa
aagaaagataagaagaaaaaaaagaagcaatcaaaaaaaaaagacgtaaaaaaatctgga
attggaaaagattcatcaagtgacttctcaagtgattctggatccgactctgacatacct
agagaaaaagacagtaaaaaaccaaatagtgcacagagttcaaggtctgtgactcctgtc
cttcctggagtctcggctgattgttttaaacgaaaacaatcaggctcaccagatctgtca
cagtcgaaaaaaatcaaattagataatttcaactctgccccagtgacatcatactttcca
ggagccagtgagtctggtataacggaggatgctgtcagacgttatctgatgcgcaaacca
atgacaaccactgagcttctacagaaattcaagtccaagaaaacgggtttgacctcagag
caattggttaacgtcatgacacagatattgaagaaaataaatcctgttaaacaaactatt
aaaaataaaatgtatctgtcaatcaaggcacaacataattga
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