Neodiprion pinetum (white pine sawfly): 124211370
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Entry
124211370 CDS
T08966
Symbol
PCNA
Name
(RefSeq) proliferating cell nuclear antigen
KO
K04802
proliferating cell nuclear antigen
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03030
DNA replication
npt03410
Base excision repair
npt03420
Nucleotide excision repair
npt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124211370 (PCNA)
03410 Base excision repair
124211370 (PCNA)
03420 Nucleotide excision repair
124211370 (PCNA)
03430 Mismatch repair
124211370 (PCNA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npt03032
]
124211370 (PCNA)
03400 DNA repair and recombination proteins [BR:
npt03400
]
124211370 (PCNA)
DNA replication proteins [BR:
npt03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
124211370 (PCNA)
DNA repair and recombination proteins [BR:
npt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
124211370 (PCNA)
MMR (mismatch excision repair)
Other MMR factors
124211370 (PCNA)
TLS (translesion DNA synthesis) factors
Other TLS factors
124211370 (PCNA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad9
Hus1
HgmA_C
Motif
Other DBs
NCBI-GeneID:
124211370
NCBI-ProteinID:
XP_046466322
LinkDB
All DBs
Position
1:30413106..30418317
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AA seq
260 aa
AA seq
DB search
MFEARLVQSAILKKVLEAIKDLLTEATFDCSDSGIQLQAMDNAHVSLVSLNLRSDGFDKY
RCDRNLSMGMNLGNMTKIMKCAGAEDTVTMKAQDNADVVAFMFESKNQEKVSDYEMKLMN
LDQEHLGIPETDYSCIVKMPSQEFARICRDLSQFGESMAISCTKEGVKFSSAGDIGSANI
KLAQTANVDAEEEAVVIEMQEPVSLTFACRYLNSFTKATPLSAQVQLSMSADVPLVVEYK
IGELGHIRYYLAPKIEDEDN
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaggcacgtttggttcagagtgcgatattgaagaaggttttggaggcgataaag
gacctcctaaccgaagccaccttcgactgttccgattcgggaattcagttgcaggctatg
gacaatgctcacgtttctttggtgtctttgaatctgcgaagcgatggcttcgacaaatat
agatgcgacagaaatttatcgatgggtatgaatctgggcaacatgacaaaaattatgaaa
tgtgctggagcagaagatactgttacgatgaaagctcaggataatgctgatgtggttgca
tttatgtttgaatccaaaaatcaggaaaaagtttcagattatgaaatgaaacttatgaat
ctagatcaggaacatcttggtattccagaaactgactattcctgtatcgttaaaatgcct
tcccaagaatttgcacgtatatgcagagatctgagccagtttggtgaatccatggctatt
tcttgtaccaaggaaggtgtgaagtttagttcagctggtgatattggttcagccaacatc
aaattagctcaaactgcgaatgtggacgctgaagaggaagctgtggtcatagaaatgcag
gagccagtatcattaacgtttgcttgccggtatttgaacagttttacaaaagcaacaccc
ctttctgctcaagttcaactttcaatgtctgccgatgtcccactggttgttgaatacaaa
attggggaacttggacacatcagatattatttggcacctaaaatcgaagacgaagacaac
taa
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