Neodiprion pinetum (white pine sawfly): 124211500
Help
Entry
124211500 CDS
T08966
Symbol
Vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npt04131
]
124211500 (Vps53)
Membrane trafficking [BR:
npt04131
]
Protein recycling
Others
EARP complex
124211500 (Vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
124211500 (Vps53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
Syndetin_C
COG4_N
Motif
Other DBs
NCBI-GeneID:
124211500
NCBI-ProteinID:
XP_046466563
LinkDB
All DBs
Position
2:14767404..14773364
Genome browser
AA seq
843 aa
AA seq
DB search
MGTRQDDEFEELQSTTYTFPSDVQTVIEQVLPSTDPLDQPNFNAVDYINSLFPTEQSLSN
IDDVISKMEYKICSIDQEIRSVVRGQTNVGQDGRVALEDAHKVIRQLFIHIKDIKDKAEQ
SEETVKEITRDIKQLDFAKRNLTSSITALNHLHMLVGGVDSLKALTQKKQYGEIVMPLQA
IMEVMQHFSNYMDIPQIKQLSDQVKQIQVELAEQITADFREAFSGQNPKHFAQLSEGCLV
MSVLDPRVKKDLLSWFIAMQLQEYSHLFDENQDSAWLDKIDRRYAWIKKHLLEFESKFGS
IFPQNWEVSERIAVQFCHMTREDLSKLMERRRHEIDVKLLLYAIQRTTSFENLLAKRFAG
LTLENSDALFEKKPRNPFEENEEVKNPFEEGYTEQGEPEKSNTSLFTRLIGKCFEPYLNI
YIESLDRNLADLMDKFLNDCKLQPPGAKELDGVEGPSSVLSSCADLFVFYKKCMIQCTQL
STGFIMLNLTSTFQKYLREYALKLLQNNLPKIGGGASIGTSMSNITRDLRDLSTAGLIQN
FQSFLKEGESTRFNKEEQSRICCILTTAEYCLETTQQLEEKLREKTDAQFSEKINLSQEQ
DIFHSVISNCIQLLVQDLESACESALTAMSKVQWIHIESVGDQSAYVSTIISHLRQNIPS
IRERLSSCRKYFTQLCVKFASSFIPKVVQQLYKCKPLNTVGAEQLLLDVHMLKTALLDLP
STGCQIQRKAPATYTKVVVKGMTKAEMILKVVMSPAESPSAFADQCRKLLPDLPTAEFQK
ILDMKGLRRTEQMQLVDQFRQSGSSLLLGDTTIIAQDSPEHEAGRIKSSRYMSVPNTDRK
LKR
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgggaactcgacaagacgatgagtttgaagaattacaatccacaacgtacacatttcct
tccgatgttcaaaccgttatcgaacaggttttaccaagtaccgatcccttagatcaacca
aacttcaatgctgtggattacataaattccttgtttcccaccgaacaatcattatccaac
atagacgatgtgataagtaaaatggaatataaaatttgctccatcgatcaggaaatccga
tcagttgtcagagggcaaactaatgtcgggcaggatggccgtgttgcattggaagatgct
cataaagtaatcagacagttattcattcatattaaggacataaaggataaggcagagcaa
tctgaagaaactgttaaggaaattactcgagatataaaacaactggactttgctaaacgg
aatttaacatcatctatcactgctttgaatcatttacacatgttggtcggaggtgtagat
agtttgaaagctctaacacagaaaaaacaatatggggaaatagtgatgcctcttcaagcg
attatggaagttatgcaacattttagtaattacatggatattcctcaaattaaacagctt
tctgatcaggtgaaacaaattcaagtcgaattggctgaacaaataactgctgattttcga
gaagcattttctggccagaatcccaaacactttgctcaattaagcgaaggttgtcttgtt
atgtcagtcttagatcctagagtaaagaaagatctgctgagctggtttattgccatgcaa
ttacaagagtactctcacttgttcgatgagaatcaagattcagcttggttggataaaatt
gacagacgatatgcttggattaaaaaacacttattagaatttgagagcaagtttggttca
atatttccccaaaactgggaagtctctgaaaggatcgctgtgcagttctgtcatatgaca
cgagaagacttgagcaaacttatggagcgaaggcgacacgaaattgatgttaaacttctt
ctttacgcgatacagaggactacaagttttgagaatttattagccaaaaggtttgccgga
cttacgctagaaaattctgatgcactttttgaaaaaaaacctaggaatcctttcgaagaa
aatgaagaggttaaaaaccccttcgaggaagggtataccgagcaaggggagccagaaaag
tctaacacatctctcttcactcgtttaattggaaagtgttttgaaccatacctaaatatt
tatatagagagtctggatagaaatttggcagacttgatggacaaatttttaaatgattgt
aaactgcaacctcctggagcaaaagagcttgatggtgttgaggggccgagtagtgtctta
tcttcatgtgcagatctttttgtgttttacaaaaaatgcatgatacaatgtacgcaactt
agtacaggctttatcatgcttaatctgacttccactttccaaaagtatcttcgagaatat
gcattgaaactgttgcagaataatttaccaaaaattggcggtggcgctagtattgggacc
agtatgagtaacataacacgtgatcttcgagacctgtcaacggccggtcttatacagaat
tttcaaagctttctcaaagaaggtgaatctactagatttaataaggaggaacaatctcgg
atttgctgtatcctgacaacagcggaatattgtcttgagacaacccaacaactagaagaa
aagctaagagaaaagacagacgcacagttttccgagaagattaatttatcacaggaacaa
gatatatttcacagtgttatatccaactgtattcagctgttagtacaagatctggagtct
gcttgtgaatccgcattgactgcaatgagcaaggtacaatggatacacattgaaagtgtg
ggagaccaaagtgcatatgtcagtaccatcatttcacatcttaggcagaatattccttct
attcgagaaagattatcatcttgtagaaaatattttacacaactttgtgttaaattcgca
agttcattcattccaaaagtagtgcagcagctgtataaatgtaagcctttgaacacagtt
ggggcagaacagttgttactagatgttcacatgctcaagacagcactactcgatttacca
tcaactgggtgtcaaatacaaagaaaagcacccgcaacatatacaaaggtagttgtcaag
ggtatgaccaaagctgagatgatattgaaggtggtaatgtctcctgcagaatctccgagt
gcttttgcggaccagtgcaggaaactgcttcctgatttaccaaccgcagaatttcagaaa
atacttgatatgaagggattacgacgaacagaacaaatgcaattagtggaccaatttagg
cagagtggaagcagcttgttgttaggagataccacgatcattgctcaagatagtccagag
catgaggctggacgtattaaaagctccagatacatgtcagttcccaataccgatagaaaa
ctgaaacgctaa
DBGET
integrated database retrieval system
