Neodiprion pinetum (white pine sawfly): 124211605
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Entry
124211605 CDS
T08966
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03018
RNA degradation
npt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124211605
09123 Folding, sorting and degradation
03018 RNA degradation
124211605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npt03019
]
124211605
03041 Spliceosome [BR:
npt03041
]
124211605
Messenger RNA biogenesis [BR:
npt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124211605
mRNA degradation factors
5'-3' decay
Lsm complex
124211605
Spliceosome [BR:
npt03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
124211605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Hfq
BPL_C
Motif
Other DBs
NCBI-GeneID:
124211605
NCBI-ProteinID:
XP_046466814
LinkDB
All DBs
Position
2:5416889..5417781
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AA seq
91 aa
AA seq
DB search
MTSSVTTNPSTLLPLELVDKCIGSRIHIIMKNDKEIVGTLQGFDDFVNMLLDDVTESEAT
PEGRRVTKLDQILLNGNNITMLVPGGDMPET
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgactagctctgtgactacgaatccatccacgcttttgccgctagaattggtggacaag
tgcatcggctcccgcattcacattatcatgaaaaatgataaagaaattgtgggtacatta
caaggatttgatgactttgtgaatatgttattggatgatgtgactgaaagcgaagcaaca
cccgagggacgcagagttacaaaattggatcagatcctcctcaatggaaataacattacg
atgttagtacctggaggtgatatgccagaaacataa
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