Neodiprion pinetum (white pine sawfly): 124211673
Help
Entry
124211673 CDS
T08966
Symbol
rempA
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
npt03037
]
124211673 (rempA)
Cilium and associated proteins [BR:
npt03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
124211673 (rempA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_2nd
Beta-prop_IFT140_1st
TPR_IF140_C
DUF4485
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
TPR_GEMI5
TPR_12
TPR_COPA_B
H-kinase_dim
MmeI_N
Motif
Other DBs
NCBI-GeneID:
124211673
NCBI-ProteinID:
XP_046466943
LinkDB
All DBs
Position
2:8385309..8396189
Genome browser
AA seq
1864 aa
AA seq
DB search
MSRPRERDEQEALKLDEQFKDSLARVRPYILALTAPEDVQLCRLWLDKLSYASTQRALRN
EYLMELCCQVESGHVGGMFSQPPPNGPLPVLRRSYTPMVHGSSSWSELSDASTIPYCGWP
KNYAKSIQCQFTRSKTPNQKRDTDSTSTGRCGHITKNIGASRCYEGSKADKNQIAIYEQR
IETLTTIVKELQIQNERLNQELNRLQQNSTAKEVPHLHATIKQLSAEIGTLKAKLMEVKK
MKDSLEASNEEALLQCKQSMDEKITELNMQLQEFQCKNSTLENNIAELTANLEKITRAKD
EELCAVESSCSEKLEAARQQHEHLIKQKDEELQKKDTVISRKEEELALIELNKNAEIEKL
KTEIDGLQKNLEAKKDEEAKLKAIVTEQCSTIQREFNKMRANMEAANQKQNQNLINKVAS
LKKGILKLEKTKERMSHEYEKRIYHILKDKENEVKALQLQLQGQRSELSMSLSSEKQCEL
DSLVESLEERYRSLLAAADVSAGNQRQNYLKVWPGDSGANEFNIIVTPHRDPITILEWSQ
HGGRLVSADTAGSLIGWKIDPRGQLLMVFHHELKDSFTHIAFKVVPSKPVIDINGLAKAA
VAGDERALDLFSSWRPRTAAPVAVTTQRDNHAFYIGTMNGVVYFVDSQGQCIEVLNTDGA
TLHCLLHHQSRDSVVMMTEGLNIGHFQADPITGRLTELTKVKLSGKTDMSRSGPALCWAG
TNTLAVLTGELAIRCWDLHTGDTYVLSPPDTSNGNIATPQEICTSLSYCKNNETLAAGTN
LGTIYLWKHKNASDAEDNGWPAIPESCTIHGTVKQLAWGATILRNPLLVVNCITNVFILR
QQPMCAAYNDNICASQLAPKQILLETHGQNYVLKTDLQVQVVAVNKDYVAVSSGRQIAVY
KLSRENSISTTFVGSFNCDTEKILIYESTLIVLTPLVIQLRSIEGSLTQTLPTSPEEGEP
ITMELTSRYLTVASLNGILKIWDVSKREAKLYTRAKAVFEAIDDFAEIIEARCNSDCRCV
SITVAMANLMPSSIFYVWDIESDQIYEYNFADPEDGHEESPTAIQCKGRLVTSHCWDDDD
PRLLVCRAQKLDSANSRPPSQIIPTPAQEPLTSVVLITMFATSDHGIVVQDVRSVKDENC
RLLGVRTPHIMILNSEVTFDNESKVRYIVMRDFEELGVCDTVTKKAILDFSFYISIANMD
EAFKAIKTIQNEAIWKSLARMCVKTKQLNMASLCLGHMKHARGARALREAMQDDDLNLDA
KCGILAVQLGLYEDAERLFRDANRLDLLCSMLEARNKYEESIDLAIKENKIREKTSYYNY
AKALEQEGKISEAIEMYTKADCHRFEVPRMLLSRPRELQAYLSNSDDQEIHIWHAQYIES
TGDMEAALRLYESANDTLAMTRLLCYLGRDEEVSELVTRTNHAASAYHLAAHHESRNNIA
RAVHFYSAAKAYTNAIRICKENDMTEELWPLAMLAPRHAQIDVAKYFEEAEQPDKAVLLY
HKAGMLHKALDLAFKTQQYNALQLITMDINADSDPALIRKCADYFVQNEQIDKAVDLLAT
GKYYMEALELIQAHNIVLTEDLAEKLTLEKIDNNMEREQIRTSTLEKIGEIAFSQGNYHL
ATKKFTQAGNKLRAMKALLKSGDTEKICFFAQVSRQREIYIMAGNYLQSLDWQNQPEVLK
NIINFYSKGKAMDLLANFYVACAQVEIDEFQNYEKAFDALNQASRCLSKVTTPRDRNLHK
RANDMVNNRMATIKRYLDIKKLFEHGETEAAVSQARQLIESQGSDLEQSVRRGDLFATLT
QHYANIGETEKARGTIEELKRLVPGINLSYYYNVNLLEALGYKINIQRQDSSDKDDGIEE
LLGE
NT seq
5595 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaccaagggaacgcgatgaacaggaggcactcaagctggatgagcagttcaag
gattctttggctcgagttagaccttacattttagccctcacagcgcctgaagatgtgcag
ctctgccggctttggttggataaactgagctatgcctccacgcaacgtgcactcaggaat
gagtatctgatggaactatgctgtcaagtggaatctggacatgtaggtgggatgtttagc
caaccgccgccaaatggacctctgccagtgttaaggagatcgtatactccaatggtacac
ggaagttcctcgtggagcgagttatcagatgcgagcacaatcccatattgcggatggcca
aagaattatgcaaagagcattcaatgccagttcaccaggagtaaaacaccaaaccaaaaa
cgtgacactgattcgaccagtactggtcgttgcggtcacatcacaaagaatatcggtgca
tctcgatgctacgagggaagtaaagcggacaaaaatcaaatcgcaatttacgaacaaagg
atagagaccttgaccactattgtgaaagaactgcagatacaaaatgaacgtttaaatcaa
gaactaaatcgtttgcaacaaaattctactgcaaaggaagtgcctcaccttcacgctact
atcaaacaattatcagcagaaattggaacgttgaaagccaaactaatggaagtaaaaaaa
atgaaggattctcttgaggcaagcaatgaggaagccctcctgcaatgtaagcaaagtatg
gatgaaaaaattacagagttgaatatgcaactgcaagaattccaatgtaagaatagtacc
ttggaaaataatattgctgagctgactgccaatttggaaaaaattactagggcaaaggat
gaagaactgtgtgcagtagaaagtagttgctctgaaaaattggaagctgcacgacagcag
cacgaacacttaatcaaacagaaggatgaggaactgcaaaagaaagatacagtgatcagt
cggaaagaggaagaattggcattgattgagttaaataaaaatgctgaaattgaaaaactg
aaaacggagattgatgggctacagaagaacttggaggcaaaaaaagatgaagaagctaaa
ttgaaagctattgttactgagcagtgctcaacaatccagcgcgaatttaataaaatgagg
gcaaatatggaagcggcgaatcaaaagcagaatcaaaaccttatcaataaagtggccagt
ttaaaaaaaggcattttaaaattggaaaaaactaaagaacgaatgagccatgaatatgag
aagcgcatttatcatattttaaaggataaagaaaacgaagttaaagccttgcagctacaa
ctccagggtcagcgtagtgaattatcgatgtcactgagttcggaaaaacagtgcgagcta
gacagtctagttgaaagcttggaagaacgttacagatcactgttggctgccgcagatgtg
agtgctggcaaccaaaggcaaaattatctcaaggtttggccgggtgattctggggcgaat
gaatttaacattatcgtcacgccacatcgagatcctattacaatattggagtggagccag
catggtggacgacttgtgtccgctgatacagctggctctttgataggatggaaaatagac
ccaagaggacagcttctaatggtgtttcaccatgaattaaaagattctttcactcacata
gcgttcaaagtcgttccatcgaagccagttattgatattaatggcctggcaaaggcagca
gtagctggtgacgaaagggcgctagatctttttagttcttggcgaccaagaacggcagct
cccgttgcagttacaacgcaaagagataatcacgctttttacatcggaactatgaatggg
gtggtatattttgttgatagtcaagggcaatgtattgaagtactgaacacggatggtgct
actttgcattgtttgctacaccatcaatcacgagactctgtagtcatgatgacggaaggg
ctgaatattgggcattttcaagcagatcctatcactggtcgcctcaccgagctcaccaaa
gtgaaattaagtggcaagaccgacatgtctcgatccggtcccgctctttgttgggcaggt
acaaatactctggctgtattaacaggggaactagctatcagatgctgggatctccatacc
ggagatacttatgtcttatcaccaccagacaccagtaatggaaacattgcaacgcctcaa
gagatctgcacgagtctatcgtactgcaaaaataatgaaaccctagcagctggtacaaat
ttgggaacaatttatctctggaaacataaaaatgcttcagatgcagaggataacggctgg
ccagcaattccagaatcctgtacaattcatggcacagtaaaacagctcgcgtggggtgcc
acaatacttagaaatcctcttctggttgtcaattgcataacgaacgttttcattttgcga
cagcagccaatgtgcgctgcttacaatgataatatatgcgccagccagttggcacccaag
caaatcctgctggaaacgcatggtcaaaattatgttctgaaaactgacctgcaggtacag
gttgtagcggtgaataaagattatgttgccgtttcttctgggagacaaattgccgtttat
aaattgagcagggaaaattccatatccactacattcgtcggatccttcaattgcgacacg
gagaaaatactgatttatgaaagtactctaattgtgctgacgccgctcgtcattcaactg
agatctatagaaggcagtctaactcaaacgctgcctacatcccctgaagagggtgaacca
attacaatggagctaactagccgatatctgacagttgcttcactgaatgggattcttaaa
atttgggacgtgagcaagagagaagccaaattgtacacaagggctaaagctgtttttgaa
gccattgatgattttgccgaaatcattgaagctaggtgcaactctgactgcagatgcgtt
tcaatcactgttgcaatggctaatttaatgcctagctcgattttttatgtttgggatatc
gaaagcgatcagatctatgaatataattttgctgatcccgaagatgggcatgaagaatct
cctacagcaatccagtgcaaaggtcgattagtgacttctcattgttgggacgatgatgat
ccaagacttttagtctgccgtgcacaaaagttggattctgcgaactcaagacctccatca
caaataatacccacccctgctcaggaaccattaacaagtgttgtgttgataacaatgttt
gcaacatcagatcatgggattgtagtacaagatgtacgttcagtaaaagatgaaaactgc
agattgttgggagttcgcactccgcatataatgattttgaattcagaagtaacatttgac
aatgagagtaaagtacgttatatagtaatgcgcgattttgaagaacttggcgtatgtgat
acggtgacaaaaaaagcaatcctagattttagtttctatataagtatagccaacatggac
gaagccttcaaagcgatcaaaacaattcaaaatgaagccatttggaaaagtctggcaaga
atgtgtgtcaaaaccaaacagctgaatatggcttcactctgcctaggccatatgaagcat
gcccgaggagctagagccttgagagaagcgatgcaagacgacgatttaaacttggacgca
aaatgtggcatattggcagttcagcttggtttatatgaagatgcagagcgtctttttcga
gatgcgaatagattggatcttttgtgttctatgttagaagcacgtaacaagtatgaggag
tctatagatctggcaataaaggaaaacaaaatccgtgagaaaacaagctattataattac
gcaaaggctcttgaacaggaaggcaagatatcagaggcaatagagatgtacacaaaggca
gattgtcacagatttgaagtaccgcggatgcttctgtctaggccgagagaattacaagca
tacttgtctaactcagacgaccaggaaatacatatctggcatgcacagtatattgaatca
actggtgatatggaggcagcattgcgtctttacgaaagtgcaaacgacaccttagccatg
actcgtttattgtgttatcttgggcgtgacgaagaagtatccgagcttgttactaggact
aatcatgcagcttctgcctaccatcttgctgcacatcacgagtcaagaaataacatagca
cgagctgtacatttttatagtgcagctaaggcgtataccaatgcaattcgtatttgcaag
gaaaacgacatgactgaggagttgtggcctttggctatgctggcgccgcgtcacgcgcaa
attgacgtagcaaaatatttcgaagaagctgagcagcccgataaagctgttctgttatat
cataaagctgggatgcttcacaaggccttagatctggcattcaaaacgcagcagtataat
gctttacagttgataactatggatataaatgcagactcagatccggcgttgattaggaaa
tgcgcagactattttgtacagaatgaacagatagacaaagctgttgatttacttgcaact
ggtaaatattacatggaagcattagaattaatacaagctcacaatattgtactcaccgag
gatttggcagagaaattgacattagagaaaattgataataacatggaaagagaacagatc
cgaacttcgacgttagagaaaataggagaaattgcattctcccaagggaattatcatctg
gctactaaaaagttcactcaagctggaaataaactcagagctatgaaagctcttctgaag
tcaggtgatacagagaaaatttgtttctttgcccaagtctcgcgacagcgagagatttat
attatggctggaaactatctacagtcattagattggcaaaatcaaccagaagttttaaag
aacataataaatttctactcgaaaggtaaagcgatggatttactggcaaatttttatgtc
gcatgtgcccaggttgaaatagatgaatttcaaaattacgaaaaagcattcgatgctctt
aatcaggcgagcagatgcttatcaaaggtcactacgcctcgtgatcgaaacttgcacaaa
agggccaatgatatggttaataatagaatggcaaccataaaacgctatttggacatcaaa
aaactctttgaacacggtgagactgaagcagcagtgtctcaagctcgccaactgatagag
tcgcaggggagcgatttagaacaatctgtacgacgtggtgacttgtttgcgacattgaca
cagcattacgcgaacataggagagactgaaaaggcgcgtggaacaatcgaagagttaaaa
cggctcgtacctggaataaatttgagttattactacaacgtaaatttattggaggcctta
ggatataagattaacattcaaaggcaggatagttctgacaaagacgatggtatagaagaa
ttactaggcgaataa
DBGET
integrated database retrieval system
