Neodiprion pinetum (white pine sawfly): 124211711
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Entry
124211711 CDS
T08966
Symbol
kz
Name
(RefSeq) probable ATP-dependent RNA helicase kurz isoform X1
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
npt03009
]
124211711 (kz)
Enzymes [BR:
npt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124211711 (kz)
Ribosome biogenesis [BR:
npt03009
]
Eukaryotic type
90S particles
Helicases
124211711 (kz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
HA2_C
DEAD
Helicase_C
AAA_19
AAA_22
ResIII
HA2_N
Flavi_DEAD
nSTAND3
ATPase
Herpes_ori_bp
AAA_30
AAA_16
Motif
Other DBs
NCBI-GeneID:
124211711
NCBI-ProteinID:
XP_046467010
LinkDB
All DBs
Position
2:complement(25193014..25206316)
Genome browser
AA seq
1178 aa
AA seq
DB search
MGKKGYNWKARKVTQIEIDDTLTKKIAVDIGSQRESYDQCNALVIPSQKRKTKSKDKKIT
TTRLLSKKRRKELEKVVDRKRKKANRATLLDKLAKVQVSEEELKQYTTLAAVQTRGLKRH
FNEVDKELKPKPLTSEPEEEQIIVNAIRGAKQTRLSLLGADGKQNTQFDPNIVGFDESSD
DETKSEDDFEQPSSIVKPAEESVNAKIQRVKNDVTVNKPHTTSDKNRDKIRTDKVALNNV
DPVQRKPAVFVMLDRKPEIQTARLKLPILAEEQSIMETINDNPVVIVAGETGSGKTTQVP
QFLYEAGYAKEKMIGVTEPRRVAAISMSKRVAEEMNLSSKEVSYLIRFEGNTTSDTKIKF
MTDGVLLKEIQSDFLLNKYSVIILDEAHERSVYTDILIGLLSRIVPLRNKRKSPLKLIVM
SATLRIEDFTENPKLFKVKPPVIKVESRQFPVTIHFNKRTSQNYMKDALYKAVKIHTQLP
DGGILIFLTGQQEVNTIVRKLRKAFPLRNKKFMLKKQEAKEIQQEKEPSSNNSESDEGLD
MDRVVKNARKHRKKLKEVKLPELNLDNYAVMPPDDTEGDLLDTVENRDAEDKEEEEDDDD
DDEEEDLQNLMGLSCTQPMWVLPLYSLLPSYKQTRVFDPPPEGCRLCVVSTNVAETSLTI
PNVKYVVDSGRCKTRLYDKVTGVNAFQVCYTSKAAANQRAGRAGRTGPGHCYRLYSSAVF
NDQFEQFSMPEIQRKPVDDLLLQMKVMNIDKVVNFPFPSSPDVLQLKCAEKRLCILGALD
QSKPGKENEYCAKVTPLGYSIAAFPVAPRFGKMLALSQQHDLLQYTVCLVAALSVQEVLI
ESNPIQGVTKNQWNQTRRTWAGTGNSLLLGDAMVLVRAVGAAEYAGSKGTIVKFCEENGL
RYKAVTEIRKLRQQLTNEIVLNIPDLDLNVNPRMNPPTDTQAKLLRQILLSGMANQVARK
VSPDEVEEDHDKVKWKYAYRCLEMEDPVFMHSSSVLKKTYPEWVVYQEVYETNKIYMRGI
TAIQPEWLPKFATSLCQLSEPVSDPPPRYDSRTGKVMCHVTGTFGRGGWQLPLIEVEYPN
SLEGIKWFARFFLEGQVCPALERFASLLLSTPGTMNKTWAKLLPRTEAITKALMANQVSS
KDQLYHIWKTDSKFLLNAYQKWLPESAQNEVAILWPPL
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaaaaggatacaattggaaggcacggaaggtgacgcaaatcgaaattgacgat
actttaaccaaaaagatagcagttgatattggatctcaacgtgagagttatgaccagtgt
aatgctttggttatcccgagccaaaagaggaaaactaaatccaaagataaaaaaattacc
acaactcgtttgctctcgaaaaaacgtcgtaaagaattggaaaaagttgttgatcgaaaa
agaaagaaagccaatagggcaacgcttttggacaagttagctaaagtccaagtctcggaa
gaagagcttaaacagtacacaacacttgcggctgtacaaacgagaggcttaaagcgccat
ttcaatgaggtggacaaggagctcaagccaaaaccactcacgtctgagcctgaagaggaa
caaataattgtgaatgctatcagaggagccaaacaaaccagactttctcttcttggtgca
gatggaaaacaaaatacgcagtttgatcccaacatcgtcggctttgatgaatctagtgat
gatgaaaccaaaagtgaagacgactttgagcagccgagcagcatagttaaacctgccgaa
gaaagtgtaaatgccaaaattcaacgagtaaaaaatgatgttacagtaaataaaccacat
acaacatcagataaaaaccgagataaaattcgcactgacaaagttgcattgaacaatgtt
gacccagtgcagcgaaaaccagctgtctttgtaatgttggatcgcaagccagaaattcag
actgcacggctgaagcttcccattttagcggaggagcagtcaatcatggaaacaatcaat
gacaatcctgtggtgattgttgctggtgaaacgggaagtggtaaaacgacccaagtgcca
caattcttgtatgaagctggctatgcaaaagagaaaatgatcggtgtcacagagccaaga
cgagtcgcagcaatttctatgagcaaacgtgtcgcagaggaaatgaatctgtcatctaaa
gaagtgtcgtatctcattagattcgaaggcaacactacttctgataccaaaattaaattc
atgaccgacggtgtattgctaaaggaaattcaaagcgactttcttctcaacaaatattcg
gttattattttggatgaagcacacgaacgaagtgtctacacagatatcttgattggttta
ttgtcgcgaatcgttcctttgcgaaataaaaggaaatctccattgaaattaattgtaatg
tctgcaacattgcgcatcgaagatttcacagaaaatcctaaactcttcaaagtcaaacca
ccagtcatcaaagttgaatcaaggcagtttcctgttactatacatttcaataaaaggact
agtcaaaattacatgaaggatgctttgtacaaggcagtaaagattcatactcagctgccg
gatggaggtattcttatattcttaacagggcagcaggaagtaaacacaatagtgcgcaaa
ctacgtaaagcgtttcctttaagaaacaaaaaattcatgctcaaaaaacaagaagcaaaa
gaaatccaacaagagaaagaacctagcagcaacaacagcgagtcagacgagggtttggat
atggatcgagtggtaaaaaatgccaggaaacatcgaaaaaagctgaaggaggtcaaactc
cctgaacttaatcttgataattatgctgtaatgcctccagatgatactgagggcgatcta
ctcgatacagtagaaaatcgggatgcagaagacaaagaagaagaagaagatgatgatgat
gatgatgaagaagaagatttacaaaatcttatgggactgtcgtgcacacagccaatgtgg
gtgttaccactgtattcgcttcttccgagttacaaacaaacaagggtatttgatccacca
cctgaaggctgtcgattatgtgttgtatcgacaaatgttgcagaaacttccctcacaatt
ccgaatgtaaaatacgttgtggatagcggccgctgcaagaccagattatatgacaaagtg
acgggtgttaacgcgttccaagtatgttacactagtaaagcagctgctaaccagcgggct
ggacgagcaggtagaactggaccgggacattgttacagattatattcatcagcggttttt
aatgaccagtttgagcaattttctatgcctgaaatacagaggaaaccggtagatgacttg
ttattgcaaatgaaagtcatgaatattgataaagtcgtcaattttccattcccatcatca
ccagatgtgttacaattgaaatgtgctgaaaaacgtctctgcattctcggagctctagat
caatctaaacctggcaaagagaatgaatattgtgccaaagtaacgccacttggctacagc
atagcagcgttcccagtggcacctcgatttggtaaaatgctggcgctatcacagcagcac
gatctgttacaatacacagtttgcttggtggctgctttgtctgtgcaagaagtgttgatt
gaatcaaatccaattcaaggcgttactaagaatcagtggaatcaaacacgtcgaacttgg
gcaggaactgggaacagtttacttctgggggatgcgatggtcttagttcgagccgttggt
gctgcagaatatgctgggtcaaaagggacgatagtcaagttttgcgaagaaaatggacta
cgatacaaggctgtgacagaaattagaaaactcaggcaacaactgaccaatgaaatagtc
ctaaatataccagatttggatttgaatgtcaatccaagaatgaatcctccaacggataca
caagccaaattacttaggcaaattctactttctggtatggcaaatcaagtcgcacgcaaa
gtttctccagatgaagttgaggaagatcacgacaaagtaaagtggaaatatgcatacaga
tgtttggaaatggaagatccagtgttcatgcactcttcgtctgttctaaaaaaaacttac
cctgaatgggtagtttatcaggaggtttatgaaactaataaaatatacatgcgaggcatt
actgccattcagccagaatggttaccaaaatttgccacatccttatgccaactgagcgaa
cctgtgagcgacccgccgcctaggtacgattcaagaacgggaaaggtgatgtgccatgta
acagggacattcggtcgaggtggatggcaactgccgctgattgaagtagagtatccaaat
tccctggaaggtatcaagtggtttgcccgattttttttggaaggtcaagtttgcccggca
ttggaacgatttgcttccttgctactttctacacctggcacaatgaacaagacatgggca
aaattactcccgcgaactgaagcaatcacaaaagcgctaatggctaatcaagtttcgtca
aaagatcaactgtatcacatttggaaaacggattcgaaatttcttctgaatgcataccag
aagtggttgccggaatcggcgcagaatgaagttgcaatactttggccaccgttatag
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