Neodiprion pinetum (white pine sawfly): 124211813
Help
Entry
124211813 CDS
T08966
Symbol
MetRS
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt00450
Selenocompound metabolism
npt00970
Aminoacyl-tRNA biosynthesis
npt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
124211813 (MetRS)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124211813 (MetRS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
npt01007
]
124211813 (MetRS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
npt03016
]
124211813 (MetRS)
Enzymes [BR:
npt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
124211813 (MetRS)
Amino acid related enzymes [BR:
npt01007
]
Aminoacyl-tRNA synthetase
Class I (U)
124211813 (MetRS)
Transfer RNA biogenesis [BR:
npt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
124211813 (MetRS)
Prokaryotic type
Other AARSs
124211813 (MetRS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
WHEP-TRS
Anticodon_3
tRNA-synt_1
GST_N_5
tRNA-synt_1e
Arc1p_N_like
GST_C_3
Motif
Other DBs
NCBI-GeneID:
124211813
NCBI-ProteinID:
XP_046467213
LinkDB
All DBs
Position
2:15457867..15464015
Genome browser
AA seq
973 aa
AA seq
DB search
MIILTNDNNPNALKLIIGLKLAQQSVEINTVSCRDAVLGYLPSLQLPSGSSLFSTSAALQ
FLIPTPEESSVLINKWLEWDISQLQPALVSYGGSGKLDISHKPRIWSLLKEFNRCLKSKE
RLIETNTVLSVADVSIWVSLWSTIAAVEVSKELTKEFPHVQEWLNNLESLPVVQESLKEF
KFERGMNAIGSIQAASWFPLNSYTGGTLNKQLSNEVNTPKEKEVASISEEEILNVKKNWT
SKDYPNLKEPSYPVLPKKGEKNILITSALPYVNNVPHLGNIIGCVLSGDIFARYCRQRNY
NTLYISGTDEYGTATEAKAVEENMTPQQICDKFFSIHNDIYRWFSIGFDYFGRTTTPEQT
EIVQSLFLRLKDKGFINMETIDQLLCEKCDRFLADRFVEGTCPGCKYEDARGDQCDGCGH
LVNATELLNPRCKVCNNSPVIKPSVQFFLDLPKIEPILKKWAAKTEGEWSPTARVVAKPW
LRDGLKPRCITRDLKWGIPVPIEEYKKKVFYVWFDAPVGYISITKRYTKDYEQWWKPKDH
DVSLYQFMAKDNVPFHAIMFPASLLAADNGHTLVNHIMAIEYLNYEDTKFSKSRGIGVFG
TDARDTGIPADVWRFYLAYIRPESQDSNFNWVDLATKNNSELLNNLGNFVNRALTFAEKN
FGSKVPPMELREDDLIVLALAQRELSQYVAALEKAKMRDALRHILAISKHGNQYMQSQEP
WVKIKGSDDDKKKAGTVIGVCSNLACLLSALLGPYMPSTSRELRAQLGLDKISYGYIPDT
IMTFLPAGHKIGKPSPLFSKIEDQQVELLRKKYAGKQDSPSRELKSVIPAAATDTAALEA
AIVKQGLLVRDLKAKGDKTIWQPQVQILLQLKKQLAELTSSTAKINSQSTPVNAKKSVSA
ATSELNGDGGQDVATLEAAIAKQGLLVRDLKTKGDKSVWQPEVEILLNLKKQLASITGAP
VSAANDKKSKKKK
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgattatactgacaaacgataataatccaaacgcgttgaaattgattatcggtttgaaa
ttagcccagcagagtgttgaaataaacacagtgtcatgtcgagacgctgtattaggatat
ttaccatcgctgcaattgccttcggggtcaagtttattcagcactagcgcagcgcttcag
tttttgataccaacgcctgaagaatctagtgttctaattaacaaatggctcgagtgggac
atttctcagttacagcctgcattggtttcttacgggggttcaggaaaattagacatttcc
cataaacctcggatatggtctttgctaaaagagtttaataggtgcctgaaaagcaaagag
cgtttgatagagaccaatactgttttgtcagtggctgatgtttctatttgggtttctttg
tggtcgacaatagcagccgttgaagtcagtaaggaattaaccaaagagtttcctcatgtc
caagaatggttgaacaatcttgaatctcttccagtagttcaggaatcattgaaagaattt
aagtttgaaagaggtatgaacgcgataggcagtatacaggctgcttcgtggtttccactt
aattcatacacaggaggaaccttgaataaacaattatcaaatgaggtaaatacaccaaag
gagaaagaagtagcttccatcagcgaagaggaaatactgaatgttaagaaaaattggaca
tccaaagattatcctaatcttaaagagccgtcgtatcctgtacttcctaagaaaggggaa
aagaatattctgataacatcagctcttccttatgtcaacaatgtgcctcatcttggaaat
attatcggatgtgttctgtctggtgatatttttgccaggtattgcaggcaaagaaattat
aatacgctgtacatcagtggtactgacgaatacggtacagctacagaggctaaagcggtt
gaagagaatatgacaccacaacaaatttgtgacaagtttttcagtattcacaatgatata
tatcgatggttcagcatagggtttgattactttggacgtacaacaactcctgaacaaaca
gaaattgtgcaatctctattcctcaggctgaaagacaaaggattcataaacatggaaaca
attgatcaattgctttgcgaaaaatgcgacaggtttttagcggacagatttgtagaggga
acttgtccaggctgcaagtacgaagatgctcgcggagatcaatgcgatggatgtggtcat
cttgtgaatgccactgaattgttgaacccgcgatgtaaagtgtgcaataattcgccggtt
attaaaccatcggtgcaatttttcctcgatttgcctaaaatagaaccaatattaaagaag
tgggctgcgaaaaccgaaggcgaatggtcgccaacagcaagagttgttgcaaaaccttgg
ctgcgtgacggtctgaagccacgctgtataacgcgagatttgaaatggggcatacccgtg
ccgatcgaggagtataaaaaaaaagtattttacgtttggttcgatgcgccagttggttac
ataagtattacaaaacggtacacgaaggattacgagcaatggtggaagccgaaggaccat
gacgtgagcttgtaccaatttatggcgaaagataacgttccatttcacgcaattatgttt
ccagcatcgttgttggctgccgacaatggacacacattagtaaaccacattatggcaatt
gagtacttgaattacgaggatacaaaattctcgaaatcccgaggcatcggcgtgtttgga
accgatgctagagacacgggcattccagctgatgtatggcgattttacctcgcttacata
aggccagaaagtcaggattctaacttcaattgggtcgacctggctacaaaaaataatagc
gaattactcaacaatcttggtaattttgtcaacagagcgctgacctttgctgagaaaaac
tttggatccaaagtcccaccgatggaacttcgggaagacgatctcattgtacttgctctt
gcccaaagagaactttcacagtatgtggcagcattggagaaagcaaagatgagagacgct
ctcagacacattttagcgatatccaaacacggaaatcagtacatgcaatcacaagaacct
tgggtcaaaatcaagggctctgacgacgacaaaaaaaaggccggtactgtcattggcgtc
tgctcaaatttggcctgtcttctatctgcattgttgggcccatacatgcccagtacatct
cgtgaattgcgagcgcaattgggcctggataaaatcagctacggctacattccggacact
attatgacctttttaccagccgggcataagataggaaaaccatcgccacttttcagtaaa
attgaagatcaacaagttgaattgttgaggaaaaaatatgctggtaaacaagactcacca
tcccgagaactaaaatcagttatccctgctgctgcaacagatactgctgcattagaagct
gcgattgtcaagcagggcttgcttgtaagagatttgaaagctaaaggagacaaaactatt
tggcaaccgcaagttcaaatcctactgcaactgaaaaaacagctggctgaactcacctct
tccacagcaaaaattaacagtcagtcgacgccagtgaatgcaaagaagtctgtatctgct
gcaacctctgaactaaacggagatggtggacaagacgttgctactctagaagctgcaatt
gcgaagcaaggacttctcgttagggacttgaaaaccaagggcgataaaagtgtctggcaa
ccggaagtggaaattttacttaatttaaagaagcaattagccagcataaccggtgctccg
gtctcggccgccaatgacaaaaagtcaaagaagaaaaaatag
DBGET
integrated database retrieval system
