Neodiprion pinetum (white pine sawfly): 124211950
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Entry
124211950 CDS
T08966
Symbol
rno
Name
(RefSeq) PHD finger protein rhinoceros isoform X1
KO
K22156
protein Jade-3
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
npt03036
]
124211950 (rno)
Chromosome and associated proteins [BR:
npt03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
HBO1 complex
124211950 (rno)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H_2
zf-HC5HC2H
PHD_2
EPL1
PHD
C1_1
Motif
Other DBs
NCBI-GeneID:
124211950
NCBI-ProteinID:
XP_046467470
LinkDB
All DBs
Position
2:5633468..5645909
Genome browser
AA seq
2838 aa
AA seq
DB search
MAQRGKRINRSDNDPASCPGTIKRRKCRLGPAVPSSLAAAAALGPSEEEETMASSSQGGA
SWTPRPLSDIKSTIYNRSATEAPAELFRKDLISAMKLPDSEPLSPNEYWVITDQWKQEWE
RGVQVPVNPDSLPEPAVTVTQTSPSNKLHGEFKLPKKFIRISRDDWFNSEDHHLSTTPAR
AEKACAYDLDDTDIAWLGVLNGERAQAGQSSITEPQLERVIEELEVCCWERIQTIVKNEE
GLGIEFDENVICDVCRSNVWLQPDSEEGNEMVFCDCCNICVHQACYGITSIPEGSWLCRT
CSLSQRPDCVLCPNKGGAMKCTRSGQKWAHVSCALWIPEVSIGCVERMEPITKISSIPQS
RWALICVLCRERVGACIQCSIKTCKTAYHVTCAFKHGLEMKAIIEDEMADDGVKLRSYCQ
KHSRTNTKDKVGVGGAVGGSSGKGASDSEDGEARKRKRKDMTSEEKNQARAAKLQEIEAE
FDKHVSLKDITSQQLDVDPDGIVYIYNYWKLKRRAGHNKPLLAPRCGELSGAGARAQGQA
ADLEKMRTFVQLRQDLERVRNLCYMVGRREKLCRTFLKLREQTFHKQALIMSGSLLPPTA
AAAVLEANHGPSIYDRLYSDPYSNDHTHDFDVIVARIAGIKSPTPVSSDEKKIQTDFNGA
SKENSKIDNPYKRLYLNGSVRRKSLYDSDLSSISHSETDTAKPTVKSPNKNLNKTPKLEL
NTDTSTEEESAPSKPQTNRRKNKKTNVPGRSRTALHDSSESDKTDTHVGKLRTLQQMERE
LEGGGSASDSDDLLPLGSTSASRLGPSHAAAIYSDTDSDSQEHAHGAVLRTKAAVKEFSA
ADISKNSQKNFATKDTSRQDHSADEIPKSKDNNAKVSKKKEYVPTALIVPQRQAAKKASE
IMQRSQSKKDPSIEPDMTKSPTDEVKVAKPVKQKSGKPRDGKVNKDSKNNDIYDFDKEFG
DGSEILAYVPQRQAAKKAAEHIKSGMGTKVGQPEVAEIPEVKTKKDSPEQPRKKELKKEE
TPKKEEASKKTRKLQQESLVPSILSSNSDSSSSSSCSSSSDSSSDSDECKTTAQNVPTTP
AIELANSPSTSSDTDNSNEVKAKTLNKRHYNKTADNATDSDTTQKKSVGRKVKKLPDKKL
KTSDGRHGPEFQPPPFEREESSRFSASKEHQPQHPPAPQQQQQQQPHDRKSDQRESTKKV
ITPQHQHSNQSSPLSGSRDNDGARNLLGPKSAKKTNQISKQPHQQQSTSTRKDEASAITK
TKVDARKRKSSEVPQKEEKNSKSLASLKKIEKKVTDTRQIETEKCDSKNDTNISELDTSK
NLLEETALKTDDKKYKKTAAKSSVNTLEEEIKQRKAERDSPKKSSRGLDKLLEKREHLDK
LSKAKNSDVKIEKEIRKDSESIHKDEYHPKIVTTESVKNEHYKHHPGSNNDVGTTLPDVD
RRSSDFSEIISDQYPECKKKSEDKIDTRTEISIQDTEMSTANVDTKETRDNTVSKCTSEK
LEASEKDCHKRRKSTNRSIFSPQHAGKDPSVSEFFDFEHDILTVDDMVNDDGFGIPRDPE
ERAPPLTFSFNNELWFKEDSKEDSARETLHLVEKLRMELSKKSNTGQPELESVAIEEEVK
KEEILLEKPTEQISSNKELKLKEPEPEPMSDVKHNDSINQISDDLDCKNQSIEEKDKSCY
THNNEPYAPYNNEGRETGKVTVAEREKLDRAEADERWVPPSMENFNPNEVHLNTLIESQN
HRYSGHEYPNDAVMSESNNEVLVHPQINMNIQEQYQLFQQTHQLMHPAQHVDPHPEARVP
PIQIIDQQVGQLPSQIVDEITPMEMVNRHLIEPPNSEEDQVNDIEAQVLEKDEMSSDMRQ
DYNQGGSPYNDISNSRQDTRWAESQVLPSRRSTSSSITSASSNEDPSTIPSYKNMAPIPF
PPRSMETGAYHSYSEPSTYAGPVSLFPPQSCAASLPYPSPGTGMFPPPFGAPFPTSGSLL
PHVSKPLEDSLNMQASPLTAAFTSSSHNMALTAAMVSPTKIPTPPPPPPIISEQEQTQEV
HQQQQLQQQQLQELQQQPSPPVVPMPFLNNMSETPVSDSVVDTLQEMLIENKSTQPGKKS
PAKPTRSSARVTSLQGKSPGKSPRQEASKTVPASKARSRASKSSQQAGYRNRGRGRGRGR
GRGSHGTTAMSNVNIVNAMHNNEDTIRSKLVGTVYDFDSDEDSTNETNIADLRTMRERKK
STDVNDKRESLSILNEGLQTSHLSSPTLHKKYNDERRLSSPTAHDSAGIGDSEATTGQPF
TDTVLPLLPGPVDMRTYNSTIDAQTSSIHTQAYANHLLGPFTSGSADQSLPDIDEDLEKE
LHSALIASKQSDPCRDGHISNPTAEAPSSNINESNKVLLTDSRNQLKVKIKGPFLDANYV
PATSAPPLAQQAPVIITPAATNASVASGTSNLRRMRKKELLRQYCTQDMNMEDSTCGNIT
SAPITIPPVSRNVITIPKAVASMTSFPTREDYKAVVDANMEKKRRKERGGSFLDLPDEEG
ASDRRRGVGASNIDRRRGRQTRPSATTVTNSGLAPKLKIKIGNSIIGQELGNVQQDDRSR
IRPPKKRLSSISSLPTMEELKRESMKFRRMIMAGFDNDEKPKVKSKKDKNGKRKKKQSNK
KEGHVEIVGDGPAPPKLIIRLGKGTNSATNVHETTSNEVPSINPVGIVDGDKASRVNHPD
NQDSRVGPPPPEPSKEEVGYPLDSRVDEKLPTDPNASITSLRNVRSAKVTPIRLKLTRCQ
EGYELKAPVVSSACDDSGKVTSNLISRGEDVAVVDKESEESSTKQSSKEDDIPMLPQHTA
HNSPGCPPAPLPQGCQVR
NT seq
8517 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacgaggcaagagaataaacagaagcgacaatgatccggcgtcttgtccgggc
acgattaaaagacgtaaatgccgcctgggcccagcagtcccaagctcattggcggcagca
gcagctttggggccctctgaggaggaggaaacgatggcgtcatccagtcaagggggggcc
tcctggaccccccgccccctcagcgatatcaagtctactatttacaatcgttccgcaaca
gaagctccagctgaattgttccgcaaagatctgatcagtgctatgaaattaccggacagt
gaacctctaagtccgaatgaatattgggtaatcacagatcagtggaaacaagaatgggaa
agaggcgttcaggtgcctgttaatccagactctcttcctgaacctgcggtcactgtcact
caaacttcaccatctaacaaactgcatggtgaatttaaactgccaaaaaagtttataaga
atatctcgggatgattggtttaattcagaagatcatcatttgagtaccacacctgcacgt
gcagagaaagcatgtgcatatgatcttgatgacaccgatattgcatggcttggagtgctc
aacggggaaagggcgcaggctggtcaatcgtctataactgaaccgcaactggagcgtgtc
atcgaagagcttgaagtttgttgttgggagcgaattcaaacgattgtaaaaaatgaagaa
ggtcttggcatcgaatttgacgaaaatgtcatctgcgatgtttgtagatctaacgtttgg
ttacagcctgattccgaagaaggtaacgagatggtgttctgcgattgctgcaacatttgc
gtacaccaggcctgttatgggatcacttcaatacctgagggctcctggttgtgtaggaca
tgttctctgagccaacgtccggattgtgttttgtgtccaaacaaaggtggtgcaatgaaa
tgtacacgaagtggacaaaaatgggcacacgtttcttgcgctttgtggatacctgaagtc
agcattggttgtgttgaaagaatggagccaatcaccaaaatatctagtattccgcaaagc
agatgggcactcatatgcgtgttgtgtcgcgaacgcgttggtgcttgcattcaatgcagc
ataaaaacttgtaaaacagcgtatcacgttacttgtgctttcaaacacggacttgagatg
aaggcaataatcgaagacgaaatggcagatgatggtgttaaattaagatcatactgtcag
aagcatagtagaaccaacactaaagacaaagttggcgtcggaggagctgtaggtggtagt
agtgggaaaggtgcttccgattctgaagacggtgaggcgaggaaacgaaagcgcaaggat
atgacgtcggaagaaaagaatcaagcacgtgcagctaagctgcaagaaattgaagcagag
ttcgataagcatgtcagtctcaaagacattacttctcaacaactagacgttgacccagat
ggcattgtttatatttataattactggaagttgaagagaagagctggacataacaagcca
ttattggcaccacgatgcggtgaactatcaggtgctggtgctcgagctcaaggacaagct
gcggatttggaaaaaatgcgtacgtttgtacagctacgtcaagaccttgaacgcgtaagg
aatctttgttacatggtgggaagacgtgagaaactatgtcgtacattcttgaaactacgc
gagcaaacttttcataagcaagctctgattatgtctgggtcattgttacctccgactgca
gcagctgcggtactagaagctaatcatgggccttcgatatacgatcgcttgtactctgat
ccgtactccaatgatcatacacatgattttgatgttatcgttgcaagaattgcagggatc
aaatcccccacgccagtatctagcgacgagaagaaaattcaaactgattttaacggagcg
tcgaaagaaaattctaaaatagataatccgtataagaggctatacctgaacggctcggtg
agaagaaaaagtttatacgacagtgatttgtcatccattagccatagcgaaacggatacc
gctaaaccaacagttaaatcgccaaataaaaatttgaacaaaacaccgaagcttgaacta
aacactgatacaagtacagaagaagagtctgctccatctaaaccacaaaccaataggaga
aaaaataagaaaactaatgttcctggtcgttctcggactgcactacatgacagtagtgaa
agcgacaaaacggatacgcatgtaggcaagttacgtaccttgcaacaaatggagagggag
cttgaaggaggcggttctgctagtgacagtgatgacctgctaccgcttggtagtacatct
gcctcacgtcttggtccgtctcacgctgctgccatatactcagatactgattccgattca
caggagcatgcacacggagctgttcttcgaacgaaggctgctgtaaaggaattttcagcc
gccgatatatcgaaaaattcgcaaaagaattttgccactaaagatacatcacgtcaagat
cattcagcagatgaaattcccaagagcaaggataataatgcaaaggtgtcgaagaagaag
gaatatgtcccaactgctttgatagtaccgcaaaggcaagcagctaaaaaggcatccgaa
attatgcaaagatctcagagcaaaaaggatccttcgatagagccagatatgacaaaatct
cctacggacgaagtaaaggttgctaaacctgtgaagcagaaatcaggtaaaccgagggat
ggtaaagttaataaggattctaaaaataacgatatttatgattttgataaagagtttggg
gatggttcggaaattcttgcatatgtaccgcaaaggcaagcagccaaaaaagcagcagaa
catattaaaagtggcatgggtacaaaggttggtcaaccagaggtggcagaaatacctgaa
gtgaaaacgaagaaagattctccagaacaacctaggaagaaggaattgaaaaaagaagaa
acaccgaagaaagaagaggcatcgaagaaaacgagaaaattgcagcaggaaagtttggta
ccttcaatattgtccagtaacagtgatagtagtagcagtagtagttgcagtagttcttcc
gacagtagtagcgactctgacgagtgcaaaactactgcacaaaatgttcctactacacct
gctattgagctagctaactcaccatctacctcctccgatacagataacagtaacgaagtt
aaagcaaagacgctcaataaacggcattacaacaaaactgcagataatgcaacggattcc
gatactacgcagaaaaagtcggttggccgaaaagtcaaaaagctgcccgataagaagctt
aaaacttccgacgggcggcatggacccgaatttcagccgccgccttttgagagagaagaa
tcaagtagattctcagcgtccaaagaacatcaacctcaacacccaccagcaccacaacaa
caacaacaacaacaaccacatgatagaaagtcagatcaaagagaatcgaccaaaaaagtt
atcaccccacaacatcagcattcaaaccagagcagtccactcagtgggagtcgagataat
gatggggcacgaaatctacttgggcccaagtctgcaaagaaaacaaatcagatttccaaa
cagccacatcagcagcaatcaacttcaacaagaaaagacgaagcaagtgccattacaaaa
acaaaagttgatgctcgtaaacgaaaatcaagcgaagtacctcaaaaagaggaaaagaac
agcaaaagtctggcttcgctcaagaaaatagagaagaaggtaactgacactcgacagata
gaaactgaaaagtgtgacagcaaaaatgacactaatattagtgaactagacacatctaaa
aacctactagaagagaccgccctaaagactgatgataaaaaatacaaaaagactgctgca
aaaagctcagtcaatacattagaggaagaaataaagcaaaggaaagctgaacgagatagt
cccaagaaatcatccagaggtttagacaaacttctcgaaaaaagagaacacctcgataag
ttatctaaagccaagaactctgatgttaagatagagaaagaaattcgcaaggattctgaa
agtatacacaaggacgaataccatccaaagattgttacaacagaatcagttaagaatgag
cattacaaacatcatccaggtagcaataatgatgtaggaactacattaccagatgttgat
aggaggtcgagtgattttagtgaaataatatctgatcaatatccagagtgtaagaagaaa
agtgaagacaaaattgatacgcgcacagaaatatcaatccaagatactgagatgtcgaca
gcaaatgttgacacgaaagaaactagagacaacactgtgtcaaaatgtacatcggagaag
cttgaagcaagtgaaaaagactgccataaacgaagaaaatctacgaatcgttcgatattt
tcaccccagcatgcaggaaaagatccgagtgtatccgaatttttcgactttgaacatgat
atattaactgtcgatgatatggtaaatgatgatgggttcggtataccacgtgatccagaa
gaacgcgctccgccgctcacgttttcctttaataacgaactttggttcaaggaagactct
aaggaagatagcgcaagagaaactctacatctggttgaaaaattgagaatggagctatcg
aaaaaatcaaatactggacaacctgagctggaatctgtagcgatagaagaggaggttaag
aaagaagagattctactggaaaagcctacagaacaaatttcatcgaacaaggaacttaag
ttaaaagagccggaacctgaacctatgtctgatgtgaaacataatgatagtattaaccaa
atatctgatgacttggattgcaaaaatcaaagtatagaggaaaaagacaaatcatgttat
acacataataatgagccctatgcaccatacaataacgaaggacgtgaaactgggaaggtc
actgttgcagaaagagaaaagttggatagggctgaagctgatgaacgatgggtaccgccg
agtatggaaaatttcaatcctaacgaagtgcatctcaacacgcttatagaaagtcagaat
catcgctacagtggacatgaatatccgaatgatgctgtaatgtcagaaagcaataatgag
gtgcttgtgcatccacaaattaatatgaatattcaagaacagtatcagctgtttcagcaa
acgcatcagctcatgcacccagcgcaacatgtcgatccacatcccgaggccagagtgcca
ccaattcaaattattgatcaacaagttggacaattaccaagtcaaatcgttgatgaaata
acaccaatggaaatggtgaacagacatctgatcgaaccacccaactcggaggaagatcaa
gttaatgatattgaagctcaagtcttagaaaaagacgaaatgtcgtcggacatgaggcag
gattataatcaaggcggatcaccttacaatgatattagcaactcacgtcaggatactagg
tgggcagagagccaagtattaccttcacgtcgttctacgtcatcgtcaattacatctgct
tcctcgaatgaagatccctctactattccatcgtacaaaaatatggctccaattcctttc
ccgccacgttctatggagacgggagcctatcattcctattcggagccaagtacgtatgct
ggtccagtttcattatttccacctcagtcctgtgcagcatcattaccgtatccgtcacca
ggcacaggcatgtttcctccaccttttggagcaccttttcccacctctggatctctctta
ccacatgtatcaaagcctctggaggattctctcaatatgcaagcatcaccacttacagca
gcatttacctcttcatctcataatatggctctgaccgcagccatggtatcacctacaaag
attccaactcctccaccaccaccacctataatctcggaacaagaacagactcaggaagta
catcaacagcaacaattgcaacagcaacaacttcaagaattacaacaacagccaagtcct
cctgtggtgccaatgcctttcttgaacaatatgtctgaaaccccagtgtccgactcagtt
gttgatacccttcaggagatgttaattgaaaataaatctacgcaaccaggaaagaaatct
cctgcaaaaccaacgagatcttcagccagagtaacgtccttacagggaaaatctcctgga
aagtcaccacgtcaagaagcttcaaagactgttccagcttctaaagcacgtagcagagct
tcgaaatcttcgcaacaagccggttacaggaatcgtggacgaggccgaggtcggggacgc
ggacgcggtagtcatggaacaactgcaatgtcgaatgtcaatattgtgaatgcaatgcac
aataacgaagataccatacgtagcaagttagtgggaactgtgtatgattttgattccgat
gaagattctacaaatgaaacaaacatcgcagacctgcgtactatgcgcgagaggaagaaa
tccacggatgtaaacgacaaacgggaaagtttgagtatactaaatgagggcttacaaact
tctcatttatctagtcctactttacataagaaatataatgatgagagaaggctgtcatcg
ccaacagctcatgacagtgctggcataggagattctgaagctacaacagggcagccattt
actgacaccgtattaccgctgctaccaggaccagttgatatgagaacctataactcaaca
attgatgcacaaacatcgtcgatacacacacaagcatatgcaaatcatttactaggcccc
tttacaagtggatctgcggaccaatcattaccggatattgatgaagacctagagaaagaa
ttacattccgctcttatagcaagcaagcaatccgacccatgcagagatggccatatatcc
aatccaactgcagaagcgccttcgtcaaacataaatgagtccaataaagtactgcttaca
gattctcgtaatcagttgaaagttaaaattaagggcccattcttggacgctaattatgta
cccgcgacttctgcacctccacttgcacaacaagcacccgttattataactcctgcagca
actaacgcctcagttgcttcgggaacgtcgaatctgcgtagaatgagaaaaaaagaactc
ttacggcagtactgtactcaagatatgaacatggaagattctacttgtggcaatataact
tcggcaccaattacaataccacctgttagtcgaaatgtaattactattcctaaggcagtt
gcatctatgactagcttcccaactagggaggattacaaagcagtcgtcgatgcaaacatg
gagaaaaaaagaagaaaggaaagagggggaagtttccttgatttacctgacgaagaaggt
gcgtcggacaggcggcgtggtgtaggtgccagtaatatagatagaagaagaggaagacaa
acaagaccttcagcaaccacagtaacaaatagcggtcttgctcctaagcttaaaataaaa
atcggcaatagcataattggacaggaattgggcaacgtgcaacaagatgatcgtagtaga
ataagaccgccaaagaaaagattaagcagtatttctagcttgccgacaatggaagaatta
aaaagagaatcgatgaaattccgtcgaatgattatggcgggattcgataacgacgagaag
cctaaagtcaagagtaaaaaagataagaatggtaagaggaaaaagaaacaatctaacaaa
aaagagggacatgtagaaattgtgggcgatggccctgcccctccaaaattgatcattaga
ttagggaaaggcaccaactcagcaactaatgttcacgaaactacgtcaaatgaggtgccc
agcatcaatccggttggcatagttgacggagacaaggcaagcagagtcaatcatcctgat
aaccaagacagtcgagttggtcctccgccacctgaaccgtcgaaggaagaagtgggctac
cccctggatagtcgagttgatgaaaaattgccaactgatccaaatgccagtataacttca
ttaaggaatgtccgttctgcaaaagtcacacccataaggttaaaattaactagatgccaa
gaaggatatgaactgaaagcaccggtggtcagtagtgcgtgcgacgacagtggtaaagtg
acctcaaatttaatatccagaggggaagatgtggccgttgttgataaggagagcgaggaa
tcctcaacaaagcaatcttccaaggaggacgatattcctatgctgcctcaacatactgct
cacaactctccaggctgtccgcctgcaccactcccacagggatgccaagttaggtga
DBGET
integrated database retrieval system
