Neodiprion pinetum (white pine sawfly): 124212021
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Entry
124212021 CDS
T08966
Name
(RefSeq) integrin beta-PS-like
KO
K05719
integrin beta 1
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt04145
Phagosome
npt04512
ECM-receptor interaction
npt04820
Cytoskeleton in muscle cells
npt05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
124212021
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124212021
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124212021
09142 Cell motility
04820 Cytoskeleton in muscle cells
124212021
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
124212021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npt04131
]
124212021
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
npt04147
]
124212021
04515 Cell adhesion molecules [BR:
npt04515
]
124212021
04090 CD molecules [BR:
npt04090
]
124212021
Membrane trafficking [BR:
npt04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
124212021
Exosome [BR:
npt04147
]
Exosomal proteins
Proteins found in most exosomes
124212021
Cell adhesion molecules [BR:
npt04515
]
Integrins
Integrin beta subunits
124212021
CD molecules [BR:
npt04090
]
Proteins
124212021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
I-EGF_1
EGF_integrin
Integrin_B_tail
EGF_2
EGF_Teneurin
DUF1676
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
124212021
NCBI-ProteinID:
XP_046467651
LinkDB
All DBs
Position
2:complement(34301083..34306932)
Genome browser
AA seq
826 aa
AA seq
DB search
MGLKPGVRVLVCLVSIHLIVAYGYPDTEDISCETKETCAACIRTPQCVWCADIRPIKSED
AVENIPEQPRCTHRKFNSESWCRIDLVVDKNETLVLNDDPFSSQQNNQTQVKPQHVKISL
RRQEELRINISYQQANDYPVDLYFLMDLSASMEPYRNNLAKLGAKVVEAMGKLTSNFHLG
FGSFIDKVVLPMTNTEREWLLKMCKLKDGTPCALPYEFKHQMKLGTDVSLFTTKVEKAEI
SANLDVPEGGLDGLMQAIVCQHDIGWRKNARRLLVYSSDATYHIAGDGKLAGIVEPNDET
CHLDEKGAYTHAEILDYPSITQINKQIQKNSINVIFDVTKAVSENYRDLSLRINGSSVGL
LDSKSDNKTVVDIILSQYETLTNSITMTSSHPEFIEVKFFSRCMNQSAPLSETNECGGIR
VNKSVQFEISIKAIECPERPEDWHQIIEIKPQGVDERLTIEVDLICDCPCSKPDNGYFKA
NAPECHGQGNLACGICECNKYFQGKDCYCPRNGPEVTEISSTGCVPANATKAEPCSGKNR
GKCVCGKCECLAGPKQGDKYMGKFCECDNFSCPRSNLKVCGGPSRGTCYCGKCKCKPGWN
GDSCECSTSNTCINPVSEKVCSGFGECKCGICECDTTKGRTGQYCQDCPTCSNQYCETLK
DCVECYVHKTGLAVVGDGCDSTQCGNVEVSEKVETIDEPEADSKYKKCVVPDDNGCTFAF
KYEVGGYQRGDQRFDTVIAEKKKKCSALPLFSPLTTAAGVILLTLFLGLLGLLAWKAVTM
FHDHREYVKFEKERVCATYEGGTNPIYKAAKSTFNNPMFGTESTAQ
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgggccttaagccgggagtcagggtgctggtgtgcctagtgtctattcatctaatagtt
gcatacggctacccggacaccgaagacatctcctgcgagactaaagaaacctgcgcggca
tgcatccggacaccgcaatgcgtatggtgtgcagatattcgaccaatcaagtccgaggat
gccgttgaaaatatccccgagcaaccacgctgcacgcaccgaaaattcaacagtgaatca
tggtgtcgcatagatttggtagtggataaaaacgagacgttggtcctgaacgatgatcca
ttttcctcccagcaaaataatcaaacccaggtgaagccgcaacacgtaaagatatccttg
cgccgtcaggaagagctgcgcataaacatatcttatcagcaagccaatgattaccctgtc
gatctctacttcctcatggatttatccgcatcaatggaaccttatagaaacaatcttgct
aagttaggcgcaaaggtggtagaagccatgggcaaacttacctccaattttcatctcggg
tttggtagcttcatcgacaaggtagtcctacctatgacaaacacggagagagaatggctt
ttaaaaatgtgcaaattgaaggatgggacgccgtgtgctttaccctatgaattcaagcat
caaatgaaactgggcacggatgtctcactttttacgacaaaagtagaaaaggcggaaatc
tctgctaatctggacgtcccagaaggcggtttagatggattaatgcaagccatagtctgc
cagcatgatatcggttggcgtaagaatgcgcgtcgccttttggtatactcatccgatgcc
acatatcacatagctggcgatggcaagctagcaggaatcgttgaaccaaacgacgagacg
tgccacttggacgaaaaaggtgcctatacacacgctgaaatcctcgattatccctccata
acgcagataaataagcaaattcaaaagaacagcattaacgttatattcgacgtgaccaaa
gctgtgagtgagaattaccgggatttgagcctgcgtatcaacggttcttccgtcgggctc
ctcgacagtaagtctgacaataagacagtggtggatatcatcctcagtcagtacgagaca
ctaactaacagcatcacgatgacgagtagccacccagaattcatcgaagtcaaatttttc
tcccgctgtatgaaccagtcggctccactcagtgagactaacgaatgcggcggtatccgt
gtaaataagtccgtgcaatttgagatttctataaaggccatcgagtgtcccgaacggccc
gaagattggcaccagataatcgagatcaaaccgcagggagtcgacgaaagactgacgatc
gaagtcgatctaatctgcgattgtccgtgttccaaacctgacaacgggtacttcaaggcc
aacgcgcctgagtgccacggccaaggtaacctcgcctgtggtatttgcgaatgcaacaaa
tatttccaaggcaaagactgctattgcccaagaaatggccccgaagtgacggaaatatca
tccaccggctgtgtacctgccaacgccacgaaagcggagccctgcagtggaaagaatcgt
ggcaaatgcgtttgtgggaagtgcgagtgcctcgcgggaccaaaacagggtgataaatat
atggggaagttttgcgagtgcgacaacttctcatgcccgcggtccaacctaaaggtttgc
ggtggtccatcgcggggaacgtgctactgcggtaagtgcaaatgtaagccgggttggaac
ggtgattcttgcgagtgcagcacgtccaatacttgcattaacccggtgtctgagaaggtg
tgcagcgggttcggggaatgcaaatgcggtatctgcgaatgcgacactaccaagggaaga
accgggcaatactgtcaggactgtccgacgtgttcgaatcagtactgcgagactttgaag
gattgtgttgagtgctatgttcacaaaactggactcgctgtggtcggagatggttgcgat
tcaactcagtgcggaaacgttgaagtgtccgaaaaggttgaaacaatcgacgagccggag
gcagattccaagtataagaagtgtgtggtacccgacgacaatggttgtaccttcgcgttc
aagtatgaggttggaggctaccaaagaggagaccaacgatttgacacagtaattgccgaa
aagaaaaagaaatgcagtgctcttcctttgttcagcccgctaaccacggcagcgggagtg
atattgcttacgctctttcttgggctgctgggtcttcttgcctggaaagcagtgacgatg
ttccacgatcaccgagaatacgtcaaatttgaaaaggaacgcgtatgcgctacttacgaa
gggggcacaaatccaatctacaaggccgcaaaatctactttcaacaatcccatgttcggc
actgagtccacagcccagtga
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