Neodiprion pinetum (white pine sawfly): 124212355
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Entry
124212355 CDS
T08966
Symbol
faf
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 9X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
npt01002
]
124212355 (faf)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npt04121
]
124212355 (faf)
Enzymes [BR:
npt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124212355 (faf)
Peptidases and inhibitors [BR:
npt01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124212355 (faf)
Ubiquitin system [BR:
npt04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124212355 (faf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
DUF6802
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
124212355
NCBI-ProteinID:
XP_046468226
LinkDB
All DBs
Position
2:29625877..29643512
Genome browser
AA seq
2689 aa
AA seq
DB search
MTIATRGQGVGVDPPEGQQQTAQIHSPPGPQQLVDAMSGLQLTENVGQSEISTEPLNPAD
DSNERRNGEPDFPRSKLAMLDEKISSPRWVVPVLPEQELECLMQASIDLCRKKLDVQSEA
CQRFFREGLTISFTKILTDDAVNSWKLNIHNCINASCERLVELCVLKLDEDWFPLLDLLA
MVFNPNNKFHTFNAARASETVPQGSNIPDEELYARPTSDPRSPRGWLVDLINRFGSLNGF
EILLSRFQSGRNLTVPVIHALIKPFGQCYELLTVHTIIKYLMPIVEMVPVILDNLTDEEL
KKEAKNESKNDAISAIIKATKCLVSRVPQPDEMIKNLEILRLKMILRLLQISSFNGKMNA
LNEVNKVIASVSYYPHRNPGLDEEEWLTAERMAKWIKDNGVLEIVLRDSLHQPQYVEKLE
KILRFIIKERALTVQDLDAVWAAQAGKHEAIVKNVHDLLAKLAWDFSADQLDHLFECFQS
SWKTANKKQREKLLELIRRLAEDDKDGVMAHKVLTLFWNLAHSDEVPTEIMDQALNAHVK
ILDYSCSQERDAQKTIWLDKCVEELKSGDKWALPALKQIREICCLYEPNPNMGVSQRSHH
VYYRQEVIERLQNQHSVVILVTNSLTNYMDKVRRIVKENSEIDATTFMPDRRYNHIVQVQ
ERLNFLRFLLKDGQLWLCAEQAKQIWQCLAEQAVFVSDREACFKWFSKLMGEEPDLDPAI
NKDFFENNILQLDPALLTESGIKCYERFFKAVNSKEGKLKLKRRTFLMDDVDLIGTDYLW
RVVTNSPDEIANRGIELLKEVNTNLGPRLQASVLAFHETYIAECLDRLKAHYDTVSVLSK
VYLDSKEEREDQVANTIQMEAVKMCRVMMVLQEYLNECDAAFPGERKILPLHRAVRGKHL
SLVIRFASPGRNVDDIDIYTHTKDTLASLRRQVLRRIKASGTNVKLDLFINGEPLEQADD
RKLLCQLPLRDKMLLSAKLSQVNSNIPSSPESSSDSSTSSPHHPYDGPNLEAENNLPGVV
ISQRPQHAVFFFQLSDLGCSLQYPQLRDGARNILALVPPDTLTVARLQWFFGRYRGSEDD
VSQSQHCNEENTNVECLFFAASPSQVLYNMMVLYALLMPALDPMSDRAFEFQYNFIKSGE
ASVILDMLTKNKFLPNADESTKRAAYLTVLKLCKLLLTVVGNVMVRVIDEVVQQQSSSPE
NHENNDNHNSGVRGPIAVLKQALHSVPNQNTEHMLRSVAAKLAQHLADQMLSGGTESDRC
RQLFVQALSWDLPDIATIRAIVRLAWASSTGNLTNVNASTEVLHAVHETCQKEQRKPDVE
DELVCKEALEVLAIALVLNPSALENLTRHEMWQTFLIDLVLLSVSREVRVAAADQFLLIS
TWCSVGHQQLQFTITLLFSVLNTTVVEYAKQSHEYFQLLCRLLNYAHVAGCPLATAETLL
NDEITWLKKVRDKVRETGESQTEEAVLEGHLGLAKELLSFLPPGKKYELGSDEKRGVNLI
KELVEDFVFPASRLMLQLCGTGELCSPQTSPVCSSPLSTSAALDLLVGLCVGCVPNMKLL
VTMLTDMFYSERDEPLVEWDYLPPVGPRPTKGFVGLKNAGATCYMNSVLQQLYMVESIRV
GLLAAEGAATDVNEDFSGEERTEGEQTVEANDNDTNEEKCGADESRKEYNVGILKHVQAI
FGHLAYSKLQYYIPRGLWKHFKLQGEPVNLREQQDAVEFFMSLVESLDEALKALGHEQIM
GKILGGSYSDQKICKGCPHRYSKEEPFSVISVDIRNHSNLLDSLEQYVKGELLEGADAYH
CDKCNKKVVTVKRLCVKKLPPILAIQLKRFEYDFERVCAIKFNDYFEFPRDLDMEPYTVS
GLAKLEGEVIDCDFEEANRGTCTKYQLSGIVVHSGQASGGHYYSYVLHRQNDGTAKWYKF
DDGEVTECKMEEEEEMKTQCFGGDYMGEVFDHMLKRMSYRRQKRWWNAYMLFYTRLDVEE
NSLMKSVNELSLYTKLGVMKMPPAIEYSVRKQNIKFMHNRNQFSAEYFQFIRKLVFCNPH
TVNRLNMNDRLSPESEELAMLSVQLASRFLFYTGFHTKKTLRGAATDWYDILCHHLRGSK
AVRSWFAHNVLFNHPHRFCEYLLSCPSTEVRTAFLKILVFLAHFSLQDGPCVPPSLNAPT
ILLDPTATLSDHLLHAVLSLLHREVSDHGRYLPHYFSLFHMYASLGLAEKAQLLKLNVPV
TFMLVAIDEGPGPTIKYQYPELTKLHQVVSMLLRCCDVSSRTQSSYTAAPLPNPYGEPSC
QPDYLMPIQPQAAEILFVRTSYMKKLIEDANVTEDTVKLLQYCCWENPHLSRTVLSELLW
QIGFAYTHELRHHTDLLLAMLLIEDSWQTHRVHNALKGVPEEREGLFETIQRSKNHYQKR
AYQCIKCMVQLFSKCGPAHQLLHLNPELKRKWTLAIRWLQEELDKRPYTSNAQYAYNNWS
PPAQSNESTNGYFLERSNSAKKTLEQAYELCPDDGQEVEDASEEATDDAERYAQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQYVQLSQLAQLSHDLQTPRNAVRRRHGKK
LNWARHYEPETERELDDELRQCVLRQRQQQPLQQQQPQQQQQQQLPQQDQQQQLLQQQQQ
QPQHDPQPLHPESESSSPTHSLRSTVSIVRSASPIPQNGDPPQGSSQDP
NT seq
8070 nt
NT seq
+upstream
nt +downstream
nt
atgacgattgccacaaggggacagggagtcggggtagaccctcccgaaggtcagcagcaa
actgctcagatccatagcccaccagggcctcagcaattggtcgatgccatgtctgggctt
cagttgacagagaatgtcggacagagtgaaatatctaccgaacctcttaaccctgcagat
gacagtaatgaaagacgtaacggcgagcctgactttccccgttctaagctagcaatgctg
gatgagaaaatatctagccctcgttgggtggttcccgtgttacccgaacaagaattagaa
tgcttgatgcaagccagcattgatttatgccgcaaaaaattagatgtccaaagtgaagcg
tgccagcgcttttttcgtgaaggcttgacaatatcattcaccaaaatcttgactgacgac
gctgtgaatagctggaagctgaatatacataactgtataaatgcgagctgcgaacgtctg
gtggaactttgtgttctcaagctggacgaagactggtttcctcttctggacttactcgca
atggtgtttaatcccaacaacaaatttcacacattcaatgcagccagagcttctgagact
gtaccacaaggtagtaatatcccagatgaagaactatatgctcggcctacatccgacccc
agaagccctcgtggttggcttgtagatcttataaataggtttggaagcctgaatggattt
gaaatattactctcgaggtttcaaagtgggcggaatttgacagtgcctgtgatccacgct
ttgatcaaacctttcggacaatgttacgaacttttgactgttcatacaattatcaagtac
ctgatgcccatagtggaaatggttccagttatattggataatttaacagacgaagagttg
aaaaaggaagccaagaacgaatcaaaaaatgatgccatctcggcaataatcaaggccact
aagtgtttggtgtcacgtgtgcctcagccagatgaaatgataaagaatttagaaatatta
agactaaagatgatactgagacttctgcaaatatcttccttcaatggaaaaatgaacgct
ttaaacgaggttaataaagtaattgccagtgtaagctactatccccatcggaatccaggc
cttgacgaagaagaatggcttacagcagagagaatggcgaaatggatcaaagacaacgga
gtgttggaaattgttctaagagattctctccatcaacctcagtatgtagaaaaactggaa
aagattcttcgatttatcatcaaggagcgtgcattgactgtccaagatttggatgcagta
tgggctgctcaggctggcaagcacgaggccatagtgaaaaatgttcatgatttacttgcc
aaattggcatgggactttagtgctgatcaactggaccacttatttgagtgttttcagtcg
agttggaagaccgcgaacaagaagcaacgtgaaaagctattagaactaataagacgactt
gctgaggatgacaaggatggcgtaatggcacataaggtgctcactcttttctggaacctt
gcgcactctgacgaggtaccaacggaaataatggaccaggcattgaatgctcatgtcaaa
attttagattactcttgctcccaagagcgggatgcccaaaaaacaatatggcttgacaag
tgtgttgaggagttaaagagcggggacaaatgggctctacctgctttaaaacagatacgt
gaaatatgttgtctctatgagccaaacccaaatatgggcgttagtcagcgtagtcaccac
gtatattacagacaagaagttatagagcgtttgcaaaatcaacactccgttgtgatactt
gttacaaatagcttaacgaattatatggacaaagtacggcgcatagtaaaggagaattca
gaaatcgatgccactacgtttatgccggatcgtcgttacaatcatattgttcaagtccaa
gaaagactgaattttttgaggttcttacttaaggatggccagttgtggttatgcgcggaa
caggctaagcaaatatggcaatgtttggcggagcaagcagtatttgtttctgatcgggaa
gcttgtttcaaatggttttcaaagttaatgggtgaagagcctgatcttgacccagcaata
aacaaagacttttttgaaaacaacatacttcagttggatcctgctctcttaacagagagt
ggtataaagtgttacgaaagatttttcaaagctgtcaactctaaggagggtaaattgaaa
ctaaaaaggcggacatttttgatggatgatgttgatctcatcggcacagattatttgtgg
cgggtagttacaaacagtcccgacgagattgcaaatcgtggcattgaactgctcaaagaa
gtaaacacgaatttggggccacggctgcaagcttctgttttagcatttcacgaaacttac
atcgccgagtgtttagacaggttaaaggctcattacgataccgtatctgtattaagtaag
gtataccttgacagtaaagaagaacgggaagaccaagtggctaatacaatacaaatggaa
gcggtgaaaatgtgccgggtgatgatggtacttcaagagtatctaaacgagtgtgatgcc
gcctttccaggggagaggaaaattctaccgctgcatcgagcagttcgtgggaagcattta
tctttggtaattcgattcgctagtcctggtcgtaatgttgatgacatagatatttataca
cataccaaagatacacttgcatccttaaggcgccaagtgctacgaagaatcaaagctagt
ggtaccaacgttaaactagatttgtttatcaacggagaacctcttgagcaagccgatgac
agaaaattactttgtcaactgccgctaagagacaaaatgttgttgtcagctaaattgagt
caggtcaatagcaacatacctagttcccctgaaagtagttccgatagctcaaccagttcg
cctcatcatccgtatgatgggccaaatttggaagcagaaaataatctacctggtgtggta
atctcgcagcgccctcaacatgctgtatttttcttccaactttctgaccttgggtgtagc
ttgcaatatccccagcttcgtgatggtgctcgtaatatattggcactggtaccccctgac
acgttaacagtagctcgtcttcaatggtttttcggccgttacagaggctccgaagacgat
gtctctcagagtcaacactgcaatgaagaaaacaccaatgttgaatgcctattttttgct
gccagtcctagccaagtcttatacaatatgatggtactgtacgcacttctgatgcctgca
ctagacccaatgtcggatagagctttcgaatttcaatacaatttcattaaaagtggtgaa
gctagcgtcattctagacatgctcaccaagaacaaatttcttccgaatgctgatgagtca
acgaaacgagccgcatatctcactgttttgaaattgtgcaagttattactgactgtagta
ggaaatgtgatggtgcgtgttatcgatgaagtagtgcagcaacaatcgtctagcccggaa
aatcatgaaaataacgataatcacaacagtggcgttcgcgggccaatagctgtactgaaa
caggcactgcacagtgttccaaatcaaaatacagagcatatgttgcgaagtgttgcagca
aagttagctcagcatctcgctgaccagatgttatcagggggaactgagtctgataggtgt
cggcagctttttgttcaggcgttatcttgggacttaccagacattgcaactatacgtgca
attgtacggttggcttgggcttcgtctaccggaaatttgaccaatgttaatgcctccaca
gaggtattacatgcagtgcatgagacctgtcagaaagagcagaggaaaccagatgttgag
gatgaactagtatgtaaggaagcactggaagtattagcaatagcgttggtgcttaatccc
agtgcactcgaaaatctcacaagacatgagatgtggcaaacgttcttgatagatcttgtt
ctgctgagcgtatcgcgggaagtgagggtagctgctgctgatcaatttctactgatatcc
acctggtgcagcgttggtcaccaacaactccaatttaccatcactctcctctttagtgtt
ctcaatacaacggtggtagaatatgcaaaacaaagccacgaatactttcagcttctctgc
agattgttgaactatgcccatgtggcggggtgtccattagctaccgccgaaaccctgctg
aatgacgaaattacttggttaaagaaagtaagggacaaagttagggagaccggggaaagt
cagactgaagaagctgttcttgaaggtcatcttggcctggccaaggaattactgtctttt
ttaccaccaggtaaaaagtacgagttgggctcggatgagaaacgtggcgttaatctaata
aaggagttggtggaagactttgtatttccggcttcaaggctgatgcttcagctctgcggt
acgggtgaactttgttcaccacagacatcacctgtttgctcaagtccactgtctacaagt
gctgcgttggatctgctcgtcggtctctgtgtaggctgtgtgccaaacatgaaacttcta
gtcactatgcttacagacatgttttattcggaaagagacgagccactcgttgaatgggac
tacctgccaccagtagggccaaggcccactaaggggtttgtaggcttgaaaaacgctggg
gctacatgctacatgaattcagtgctacaacagttgtacatggtagaaagcataagggtg
ggtcttttggcggctgaaggcgctgcgaccgacgtaaatgaagacttttctggcgaggag
aggacagaaggggaacaaactgttgaggcaaatgacaatgacacaaatgaggagaaatgc
ggtgccgatgagtccaggaaagagtacaacgttggcattctcaaacatgtccaagcaata
tttggtcatctggcttacagcaaacttcagtactatataccccgtggcctatggaaacat
ttcaaacttcagggtgagcctgtcaatctgagggaacagcaagatgcagtcgagttcttt
atgagtttagtagagagtttagacgaagcgcttaaagcactcggacacgaacagatcatg
ggcaaaatattaggtggttcgtacagtgatcagaagatctgcaagggttgtcctcacagg
tactcaaaagaggagccgttcagtgtgattagcgtagatatcagaaatcatagcaatttg
ctcgactctttagaacagtatgttaaaggtgagcttcttgagggagctgacgcataccat
tgtgacaaatgcaacaaaaaggttgtaactgtcaaacggttatgcgtaaaaaagcttcca
ccaatattggcaattcaattgaagagattcgaatatgacttcgaaagggtttgtgcgatc
aagttcaacgactactttgagttcccaagagatttagatatggagccatatacggtttcg
ggacttgctaagttagagggtgaggtaattgattgcgactttgaggaagcaaatagagga
acttgtaccaagtatcagttgagtggaatagttgttcacagtgggcaggcaagcggtggt
cattactactcatacgttttacacaggcaaaatgatgggactgcaaaatggtacaaattt
gatgatggtgaagtaactgaatgcaaaatggaagaagaagaagagatgaaaactcagtgt
tttggtggtgattacatgggtgaagtgtttgatcatatgctcaaacgaatgagttacaga
agacaaaaacgatggtggaatgcatatatgcttttttacacaagactggatgttgaagaa
aattctctgatgaaaagcgtcaacgagttgtccctctatacaaagctcggtgtgatgaag
atgccacctgcgattgaatatagtgtcaggaagcagaacattaagttcatgcacaatcgg
aatcaatttagtgctgaatattttcaattcataagaaagttggtattctgcaatccacac
acagtaaatcggctgaacatgaatgacagacttagccctgaatcagaggaactggcgatg
ctctctgtgcagttagcatcacgatttttattttataccggttttcacacaaagaaaact
cttagaggagctgccacggactggtatgacattctctgtcatcatctgcgtggtagtaag
gcagttcgttcgtggtttgcccacaacgtcctcttcaaccacccccacagattctgtgaa
taccttctaagctgtcctagtactgaggtacgaacagctttcctgaagatattggtattt
ctcgctcatttttcactgcaggatggtccctgcgtgccacctagtcttaatgcgccaacg
atactgttggatcctacggcaactctcagcgaccacctcttacacgcagttttatcatta
cttcatcgcgaggtctctgatcatggccgttatctaccccattatttctctctatttcat
atgtatgcaagcctgggtcttgcggaaaaagcacagctgcttaagctgaacgtgccggta
acgttcatgttggtggcaatagatgaaggacctggacctacaataaaatatcagtatccc
gaactgacaaagctgcatcaagttgtaagtatgttactacgatgctgtgatgtatcatcc
aggacgcagtcgagttatactgcagctccattgccaaatccatatggtgagccatcgtgc
cagccagactaccttatgccaatacagccacaggcggccgagatactcttcgtcagaaca
agttacatgaagaaacttattgaggatgcaaatgttaccgaagatacagtaaaacttcta
cagtactgttgctgggaaaatccacatctttctaggactgtactcagcgaattgttatgg
caaattggctttgcctacactcacgagttgaggcatcacacagatcttttacttgccatg
ttactcattgaagactcatggcaaactcatcgtgttcacaatgctttgaaaggagtacct
gaagaaagagagggccttttcgagaccatacaacgtagcaagaatcattatcaaaaacga
gcttaccaatgcattaaatgtatggttcagttgttcagtaaatgcggaccagcacatcag
ctcttacaccttaatccagaattgaaacgaaagtggacgcttgctatcagatggttacaa
gaagaacttgacaagagaccgtatacatcaaatgcgcagtatgcttataataattggtca
ccacctgcccagtccaatgaatcaacgaatggttactttttggagcgtagcaatagcgct
aagaagacacttgagcaagcatacgaattgtgccctgatgacggacaagaggttgaagat
gcaagcgaagaagccactgatgatgcagaaagatatgcacaacagcagcagcagcagcag
cagcagcaacagcaacagcagcagcagcagcagcagcagcagcagcaacagcagcagcaa
cagcagcagcaacagcagcagcaacagcaacagcagtacgtgcaactatcacaactggca
caactatcgcatgacttgcaaactccaagaaatgctgttagaaggaggcatggaaaaaaa
ttgaattgggcccgtcactatgaacctgaaactgaacgtgaactggatgatgagttgagg
caatgtgttctgcgacaacgacaacagcagccactgcagcaacaacaaccacaacaacag
cagcaacaacaactaccacaacaagaccagcaacaacaactactgcagcagcagcagcaa
cagccacaacatgaccctcagccactccatccagaatcagaatcttcatcaccaactcat
tcacttcgaagtactgtatcgattgtgaggtcggcgtcaccgatcccccagaatggtgac
cctccccaaggctcaagccaggatccataa
DBGET
integrated database retrieval system
