Neodiprion pinetum (white pine sawfly): 124212367
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Entry
124212367 CDS
T08966
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npt03021
]
124212367
Transcription machinery [BR:
npt03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
124212367
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
PTase_Orf2
Motif
Other DBs
NCBI-GeneID:
124212367
NCBI-ProteinID:
XP_046468247
EnsemblRapid:
LOC124212367
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Position
2:complement(4037739..4045357)
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AA seq
1360 aa
AA seq
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MSNEAQISNIVNDILRVEPIEEAFSCFLVHHLDNEIEKIAGLQSELTSAMTGLNTEQQEN
GVRQFLNMAAALTNHSRLQLLLSLLENLVMSNVLPARLVCECILSCDKLQYQQEDFWVES
FNLIRRIIGGVDYKGVREIMKGCREKAQTIPARLNASVQPQLKALENVIEYIFDRNACLL
PGYFIVNEIQKAYPDNKNWPHWKLAKLLSGFVESFRATAQMVSIIGHSKMLPVVEHSGYA
DHVINPWRLDPTTLKFSLKGNLPYDQDLLKPQTELLRYVLEQPYSRDMVCSMLGLQKQHK
QRCVALEEQLVELVLLAMERSENDPPPTEGTDITVANHWLWLHLSSQLIYFVLFQFACFP
NIVMAIHDKLAGRELRKGRDHLMWVLLQFISGSIQRNPLSNFLPVLKLYDLLYPEKEPLP
VPDFSQALCTHQMAITCIWIHLLKKAQSEHLNIHRPIPHTLKVHHEFLQHLVMPNTSLCM
GSDYRIALLCNAYSTNQEYFSRPMAALVDTILGTQKGQQQQPLQPLQSNAALANGPTTPL
SMSILDSLTVHSKMSLIHSIVTHVIKLAQSKSNMALAPALVETYSRLLVYTEIESLGIKG
FISQLLPTVFKSHAWGTLYTLLEMFSYRMHHIQPHYRVQLLSHLHSLAAVPQTNQTQLHL
CVESTALRLITGLGSAEVQPQLSRFLSEPKTLVSAESEELNRALVLTLARSMHVTAIVSG
TGADSLSGTWCKELLNTIMQNTPHSWANHTLQCFPPVLNEFFQQNSVPKENKQQIKKAVE
EEYRNWASMSNENDIIAHFSVPGTPPLFLCLLWKMIFETDRISPIAYKILERIGARALSA
HLRKFCDYLVFEFANSVGGQHVNKCVDTINDMIWKYNIVTIDRLVLCLALRTQEGSEAQV
CFFIIQLLLLKAVEFRNRVQEFAKENSPEHWKQSNWHEKHLAFHRKYPEKFAPEGIMEQT
TGGPSQYQSLPVYFGNVCLRFLPVFDIVIHRYLEIPPVTKSLEILLEHLGCLYKFHDRPV
TYLYNTLHYYERKLRERPALKRRLVSAVLGSLCDIRAPNWALSEAYQLYMTRSPDDAVNW
VPELDYYVRLVRRIVETMSGIAHFPTTDWRFNEFPNPAAHALYVTCVELMAVPVAPNLIA
NSLLDVVAKGYTVVPSEQIHMWINCVGLLLAALPECYWSALHERLVETVTSRGLANWQYS
NLTPFQIFNFNITHNGLLENKYSYMIALAHSIWHHAGVGQITTMPQFIKEKLQPVVNSEE
QLIFACHLIGPTLARFNAERPRCVVELAVSLYEMLEQADRSQAHLKYMDPICDLLYHIKY
MFVGDMMKNEVECIIRRLRPALQMRLRFIAHLNIEEINSS
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgaggcgcaaatatcgaacatcgtcaatgacattcttagagtggaacctatc
gaagaagcattcagctgttttctcgttcaccatctggataatgaaattgaaaaaatagca
ggattgcagtcagaattaacatctgctatgacaggtctcaatactgaacaacaagagaat
ggcgttagacaatttcttaacatggctgctgcgctgacgaatcatagtcgcttacaactt
cttctgtcgttactggagaacttggtcatgagtaacgtattacctgcaagattggtttgc
gaatgtatcctcagctgtgataagctgcagtatcagcaagaggatttttgggtcgagtct
tttaacctcatcagacggatcattggaggagtggattacaaaggtgtcagagaaataatg
aagggctgcagagaaaaggcacaaacgataccagcaagacttaacgcatctgtacagccg
caattaaaggcgctggaaaatgttatcgaatatatatttgacagaaatgcatgtctattg
cctggctattttattgttaatgaaatacagaaggcctatcccgataataagaattggccg
cattggaaattagcaaaactgctctctgggtttgtcgagagtttcagagccactgcgcaa
atggtgtctataatcgggcactcaaaaatgctacccgtagtagagcactctggatatgcg
gaccatgtcatcaacccatggaggctcgatcctacgacccttaaattctccctcaaaggc
aatttaccctacgatcaagatttgctaaaacctcaaaccgaacttttaagatatgtcttg
gaacaaccgtacagcagagatatggtttgctccatgctaggcctccagaaacagcacaaa
cagaggtgcgtagcattggaggaacaactggttgaattggtacttctggctatggagcga
tccgaaaatgatccaccacccactgagggaacagatattactgttgcgaatcattggctg
tggctacacctttcttctcaacttatatacttcgtactttttcaatttgcttgttttccc
aacattgtgatggccatacatgacaagctagctggtcgagaattgcgaaaggggcgtgat
catctgatgtgggtcctattgcagtttatatctgggagtattcagcgtaatccgctgtct
aactttctgccagtacttaaactgtatgacctattataccccgaaaaggaaccactacct
gttcctgatttcagtcaggcattgtgcacacatcaaatggccatcacgtgtatatggatt
catttacttaaaaaagcgcaatccgagcacttgaacattcacaggccgatcccacacacg
ctaaaagttcatcatgaatttctacaacatttagttatgccaaatacatcattgtgtatg
ggatctgattatcgcatcgctttactgtgcaatgcttattcaacgaatcaagaatacttc
agtagacctatggctgcacttgtcgatacaattcttggcacacagaagggacaacagcag
caacccttacagccactacagagcaatgctgctcttgcaaatggaccaacaacgccattg
tctatgtccattctagattctcttactgtacattctaaaatgagtctgattcacagtatt
gttacacacgttatcaaactagctcaatctaaaagcaacatggctcttgctcctgccctt
gtcgagacctacagcagattgctggtgtacactgaaatagaaagcctcggaatcaaaggc
ttcataagtcaactgcttcccacagtattcaaatctcatgcttggggaacactgtatact
ttgctcgagatgtttagctacagaatgcatcatattcaaccacattacagagttcagctg
ttgtctcatcttcacagtctcgccgcagtaccacaaacaaatcaaacccaactccatctc
tgcgttgaaagtacagctcttaggctaataactggtttaggatctgccgaagtgcaacct
caattatcccggtttttatcagagcctaaaacgctggtgtctgctgaatctgaagagttg
aatcgagctttagttctcacactcgcaagatcaatgcatgtcacagccattgtttcaggg
acaggagcagattcattgagtggtacatggtgcaaggaactgctgaatacaatcatgcaa
aatacccctcactcgtgggccaatcatactctccaatgttttcctccagtattgaatgaa
tttttccaacaaaatagtgttcctaaggaaaacaaacaacagatcaagaaagcagtcgaa
gaggaatatagaaattgggcatcgatgagcaatgaaaatgatataatagcacatttctct
gtgcccggaacaccacccttgtttctatgtctcttatggaaaatgatatttgaaacagat
cgtataagtccaattgcgtataaaatattggaaagaattggcgcaagagctctttcagcg
catcttcgaaaattttgcgactacttagtttttgaatttgctaacagcgtcggaggtcag
catgtgaacaaatgcgttgataccattaatgacatgatctggaaatacaacattgtgaca
attgataggctggtgctctgtttggcactacgaacacaagaaggcagcgaagctcaagtt
tgctttttcattatccaattgcttttattgaaagctgttgaatttcggaaccgcgttcaa
gaatttgcaaaagaaaattctccagagcactggaagcaatcaaattggcatgaaaagcat
ctcgcatttcatcgaaaatacccagagaaatttgctcctgaaggaataatggaacaaacc
accggaggccccagtcagtaccaaagtctgcctgtatactttggaaatgtgtgcctacga
ttcttaccagtattcgacattgtgatacacagatatctcgagatacccccagttactaag
agtttagaaatattactagaacacttgggatgtctctataaatttcacgatcgacctgtc
acatacctttataacacgctgcattactacgaaagaaaacttagggaaaggccagcactg
aagcgacgcctagtctctgctgtgcttggctcattgtgtgatattcgggctcccaattgg
gcactatccgaagcttatcagctatacatgacgcgatctcctgacgacgcagtcaactgg
gtgccagaattagattattatgttcgacttgtgcgtcgtatcgttgagaccatgtcaggg
atcgcacatttcccaacaactgactggaggttcaatgaatttccaaatcctgctgcgcat
gctctttatgttacctgcgtggagctcatggctgtacctgttgctccaaatttaatagcc
aattctttgcttgatgttgtcgccaaaggatatacagttgtaccatcagaacagatacac
atgtggatcaactgcgtaggattattgttggctgctttacctgagtgttactggtcagcc
ctccacgagcgccttgtggaaacagtgacgagtcgtggactggcaaactggcaatatagc
aacttaactccatttcaaatattcaattttaatattactcacaatgggttattggaaaac
aaatatagttacatgatagctctggcacattccatttggcaccatgcaggagttggtcaa
atcacaactatgccacaattcatcaaagaaaaattgcaaccagtcgtcaacagcgaagag
caattgatatttgcttgccacttgataggaccgactttggcacgatttaatgcagagaga
cctcgatgcgtcgttgagctcgctgttagtctgtatgaaatgcttgaacaagcggaccgt
tctcaagctcatctcaaatatatggatccgatttgcgacttgctataccatatcaaatac
atgtttgtgggtgatatgatgaaaaacgaggttgaatgcataattcgcagactaaggcct
gcgctgcaaatgcgccttcgtttcattgcccacctcaacattgaggaaataaactcatcc
tga
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