Neodiprion pinetum (white pine sawfly): 124212791
Help
Entry
124212791 CDS
T08966
Symbol
Rrp1
Name
(RefSeq) exodeoxyribonuclease isoform X1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124212791 (Rrp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npt03400
]
124212791 (Rrp1)
Enzymes [BR:
npt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
124212791 (Rrp1)
DNA repair and recombination proteins [BR:
npt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
124212791 (Rrp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
VPS13_M
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
124212791
NCBI-ProteinID:
XP_046469203
LinkDB
All DBs
Position
1:26619592..26625544
Genome browser
AA seq
407 aa
AA seq
DB search
MRSVARLAFGLIGLGRIATQRQGQNYAVVYSTVTLNRQFLRLSSQKLFLSFINLRLFKHV
TANMPPKRRAPRKVSRKAEAGTSQEDEIQTKTAAKSASKKTKRNVDEEEASNDEPAPKKT
KLEQKKAPMNKTESNLSNIDFDCPKLNANGDKFNVKICSWNVSGVRACLKKNGFEYLLKE
NADIIALQETKCDKDKLPDEIKLPGYHEYFIDSKKSGYCGVALYSKKEPLDIIYGLNIPK
HDDEGRMITAEYENFFVVCVYVPNAGKNLVTLPKRLQWNEDFKKFIQKLDAKKPVIVCGD
MNVAHNEIDLKNPTTNMKNAGFTKEERQGMTDFLDAGYVDTFRQLYPDKTDAYTFWAYFN
NSRSKNIGWRIDYFLVSKTIKDNVCDSVIRDQIFGSDHCPIILYANL
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagcgttgcacgcctggcatttggattaataggattgggaagaatcgcgacgcag
cgtcaggggcaaaattacgcggttgtttactccaccgttacgttgaatcgtcaattcctt
agactttcttcacagaaattatttctttcttttattaatttaaggttattcaagcacgtg
acagcgaatatgccgccaaaacgcagagcaccacgaaaggtatcgcgtaaagctgaagca
ggaacttcgcaggaggacgaaatacaaactaaaactgctgcaaagtcagcaagtaaaaaa
acaaagcggaatgtagatgaagaggaggcttcaaatgacgaaccagctccaaagaaaact
aaattggagcaaaagaaagccccgatgaataaaactgagtcaaatttaagtaatattgac
tttgattgcccaaagttgaatgcaaatggtgacaagttcaacgttaaaatatgcagctgg
aatgtatctggagttagagcatgtcttaaaaaaaatgggtttgaatatcttttgaaggaa
aatgctgatattattgcacttcaagagacaaaatgtgacaaagacaaactacctgatgaa
ataaaacttccagggtatcacgaatactttatagacagcaagaaatctggatactgcgga
gttgccttatacagcaagaaagaaccgttggatattatatatggattaaacattccaaaa
catgatgatgagggtagaatgataacagcagaatatgaaaatttttttgtcgtttgtgtc
tatgttcctaatgccggcaaaaacctggttacactgcctaaaagactgcagtggaatgaa
gatttcaaaaaatttattcaaaagctagacgcaaagaagccagttatcgtgtgcggagac
atgaatgttgctcataacgaaatagacttgaaaaacccaacaacaaacatgaaaaatgca
ggtttcaccaaagaagaacgacaaggtatgacggatttcttagatgctggttacgttgat
acatttagacaactatatcctgacaaaaccgacgcatatacattttgggcatacttcaat
aattcacgcagcaagaatattggatggaggattgattactttctggtttctaagacaata
aaagataacgtttgtgacagtgttatcagagatcagatatttggcagtgatcactgtccg
ataatactttacgcgaacttgtaa
DBGET
integrated database retrieval system
