Neodiprion pinetum (white pine sawfly): 124213011
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Entry
124213011 CDS
T08966
Symbol
Pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03013
Nucleocytoplasmic transport
npt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124213011 (Pnn)
03015 mRNA surveillance pathway
124213011 (Pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npt03019
]
124213011 (Pnn)
03041 Spliceosome [BR:
npt03041
]
124213011 (Pnn)
Messenger RNA biogenesis [BR:
npt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124213011 (Pnn)
Spliceosome [BR:
npt03041
]
Complex C
Other components
EJC/TREX
124213011 (Pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Pinin_SDK_N
Motif
Other DBs
NCBI-GeneID:
124213011
NCBI-ProteinID:
XP_046469726
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Position
2:complement(35754877..35757679)
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AA seq
386 aa
AA seq
DB search
MRKLETRESWGAEKLEAQLEAARDNLRGLDRSIQKILGRDPPDGENPLQPTARIAQKRPV
QEDHRRRQVADFAVLPNNLTVFKRRWVAPPGEPKTVFSRLSARIPSNADDSADEDDNTAK
PAVSSRVIATPREIPSRQEVIRRERVDERSRQRNKRMFGALLGTLQKFRQEETKLKAKED
KKAEVEARVEEAGRREKEELRRERQQLFQSRKRQQAEVRSLEAKLVRSRQFQEWRASQLP
LTSFIRTRTQPSIYYLPKRKHSRTDSLLALSAKELNDEIERREKILMEELEQIEFQAGLG
KQLSNESNIVSTVQEEPPTPMEEGEENRDPNHEVEQIEKEEVQSSGSPTCESKELIPLPI
DSAPVEVAEVQETQEMQEMLEDANNG
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaattggaaaccagagagtcgtggggcgccgagaagctggaagcgcaactagaa
gcagcgcgcgataacctccgaggtctcgatcgaagtattcaaaagattctcggccgggat
cctcccgatggcgaaaatcctctccaaccaacggcaaggattgcccagaaacgaccggta
caagaagatcatcgcagacgacaggtggctgactttgcagtcctgccaaataatttaacc
gtctttaaaagacgatgggtcgctcctcctggagaaccgaagacagtttttagtcggctt
agtgctcgcatcccgtcaaatgcagatgacagtgccgacgaagatgacaacactgccaag
ccagctgtctcctcaagagtgatagcaacacctagagaaataccttcgcgccaagaggtt
attaggcgagaaagagtggatgaacgaagtcgtcagcgcaacaaacgaatgtttggagct
ctcctcggtactttacaaaagtttcgtcaagaagaaactaaacttaaagccaaggaggat
aaaaaagcagaggtcgaagctcgtgtagaggaggctggcagacgggagaaggaggagctg
aggcgagaaagacaacagttatttcagtctcggaaacgtcaacaggcagaagttcgcagt
ttggaagctaaactggtgcgcagccgacagtttcaggaatggcgcgcgtctcaattaccg
cttacatcatttattcgcacgcgtactcaaccatctatctattatttaccaaaacgaaaa
cattcgcgcacagattcgcttttagctctctccgcaaaggagctcaatgatgagatagaa
aggagggaaaaaatcctgatggaagagctagagcaaatagaatttcaagcaggattagga
aaacaactttccaatgaatcaaacatagtttcgaccgtgcaagaagaacctccaacacct
atggaagaaggcgaagagaatcgagatccaaatcatgaagtcgaacagatcgaaaaggaa
gaggtacagtcttcaggttctcccacgtgcgaatcaaaggaactaattccgctcccaata
gattcagctccagtagaggtagcagaggtgcaagaaacgcaggaaatgcaagaaatgcta
gaggatgccaataacggctag
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