Neodiprion pinetum (white pine sawfly): 124213029
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Entry
124213029 CDS
T08966
Symbol
wcd
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124213029 (wcd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
npt03009
]
124213029 (wcd)
Ribosome biogenesis [BR:
npt03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
124213029 (wcd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
eIF2A
PEP5_VPS11_N
WDR90_beta-prop_4th
EIF3I
Beta-prop_EML
Cytochrom_D1
Beta-prop_RIG_2nd
SGL
KNTC1_N
Beta-prop_Vps41
YBL028C_N
B-prop_COPA_B_2nd
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
124213029
NCBI-ProteinID:
XP_046469772
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Position
2:37636798..37640946
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AA seq
559 aa
AA seq
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MAATVDRVSSLEPSEDEIEAEELEETLRKRKTSEPELGEVKYNKKFTTPLRKKRRNHYDP
VEEARLERLVFGDHIDVISNLLQDEHNDSKSQTPLSKVSTPNDEVDDSDDNEDNDEKTDD
SDLDRSGSEDTEQDTDADSGVEDEELKTEKQAAWVDDDEEENLSVEETLRLQGRRLAVQR
PEKHYKELLRNKYQQLVGTPKWAEISAKKETGSEEDSDDEILRHSSHLITPKPKNLAQGT
IELKALKNINQETRSEGPVITSLQFHPTSTVALVAGLSGILSIFQIDGKQNTKLHSMQYR
RFPINTARFTKEGSEIVVGSQRHAHCHTYDLLAGKTYRVPLPHGMTNMKNFEVSPDEKFI
AVCGRMGNIYILTTKTKELVSTLKMNDQCNTLAFSPDSRKLFTHGEGGEIYVWDMNERTC
MHRAIDDGCLSGSRIAVSPSGQYLATGSKQGVVNVYDTSTVLDSTNPSPLKIVLNLVTSI
TSLKFNSASEILSMASDETENAFKMMHLPSATIFSNFPTFRTKFFKPIAVDFSPGSGYLG
ISNNKGNAYLYRLKHYGNY
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaacggtagaccgtgtgtcaagcctcgaaccatctgaggatgagatagaagca
gaagaattagaggaaacactgagaaaaagaaaaacgtcagaacctgaacttggagaggtt
aaatacaacaagaagtttaccactcctctgagaaagaaacgcagaaatcattacgacccg
gtagaagaagccagactcgaaaggctcgtattcggtgaccatatcgacgtcattagcaac
cttctacaagatgagcacaatgattctaaatcacagacacctttgtccaaggtttcgacc
cctaatgatgaggtggacgattctgatgacaatgaagacaatgatgaaaaaaccgatgac
tctgatttagatagatcgggttcagaagatacagagcaagatacagatgctgattcggga
gtcgaagatgaagaattgaagactgaaaaacaagcggcatgggtagatgatgacgaagaa
gaaaacctttccgttgaagaaaccttgcgtctgcaagggcgaagactggctgtgcagcgg
cctgaaaaacactacaaagaactgctacgaaacaagtaccaacaacttgttggcactcct
aagtgggctgaaattagtgcaaaaaaggaaactggctccgaagaggattcagacgacgaa
atattgcggcacagcagtcatttgataacaccaaaacctaagaatttagcacaaggaaca
atcgagttgaaagctctaaaaaatataaaccaagaaactcgatccgaggggcctgtaata
acaagtcttcaattccatccaacctctacagtggcattagtcgctggattatctgggata
ttgtcgatatttcaaattgatggtaaacagaatacaaaactgcatagtatgcagtaccga
agatttccaataaatacggccaggttcacaaaagagggatcagaaatagtggtaggctca
caacgccatgctcattgtcacacctatgatttattggctggaaaaacgtacagagtacca
ctaccacatggcatgactaatatgaagaacttcgaagtatctcccgatgagaaattcatc
gccgtatgtggaagaatgggtaatatatacatcctgactaccaaaaccaaagaacttgtg
agcactttgaagatgaatgaccagtgtaatactttagcattctctcctgacagtaggaaa
cttttcacacatggtgagggaggcgaaatttacgtatgggacatgaacgagcgtacatgt
atgcaccgagctatagatgacggttgcttgtcggggtcaagaattgcggtttcacctagt
gggcaatatttagccactggaagtaaacagggagtagtgaacgtctacgacactagcaca
gtcttagacagcactaatccctccccattgaaaatagtcctgaaccttgttacttctata
acaagtttaaaatttaattctgcgtcagagattctttcaatggcgtcagatgagacggaa
aatgcatttaaaatgatgcacctaccatctgctacgatattctcaaattttccaacattt
cgaacaaagttttttaagcccatagctgtagatttttctcccggcagcgggtatttggga
atttcaaataataaaggcaatgcttatttgtatcggttgaaacactatggaaactattag
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