Neodiprion pinetum (white pine sawfly): 124213216
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Entry
124213216 CDS
T08966
Symbol
ctrip
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124213216 (ctrip)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npt04121
]
124213216 (ctrip)
Enzymes [BR:
npt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124213216 (ctrip)
Ubiquitin system [BR:
npt04121
]
Ubiquitin ligases (E3)
HECT type E3
124213216 (ctrip)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
ARM_ARMC5
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
124213216
NCBI-ProteinID:
XP_046470225
LinkDB
All DBs
Position
2:complement(12736622..12764393)
Genome browser
AA seq
2074 aa
AA seq
DB search
MADQQDQSLSGGSVEKASASADASKEGGKSSSGPASGTSNNSNNTSIISPSNSSAGYRKR
QSSGEVQGNTEEKRRRQTFASSQSAALHTQNNLRRSVDSVRGENARNKSERRSHNATGLG
PPTDTDRRHLPKTQQSNSGIHGSTRSRNSARSSLPDLNSTPIDCVASRTRSRTPQNSQNN
TPHGSSSCDVLLLGLFNSYPPRKSSTAHHSNSVQTHLGSPLTSHPSTSRGRGYKSQSLSS
GSISSTSSRVLGVKSSIRVGNAASNSVESGGGALAHEGAGTSGTTAAATANPPSSSAAHS
SQSHPTHKHLLRSRVKLAADQAKETIPGNKVQGKHNKKDSTTGSCSSSRHRSSSRARKPM
VESGSGGAGVVMSGTDAAANSSTPTSVTSTIPSGQLGSSTGEEESASTAISAIASGGPSG
MSGTTGDSESDDGEVGRLQALLEARGLPPHVFGALGPRMQHLLNRSMGASSAAKAQQLLA
GLQAVDDEGEQLQAVIGMGEILVMGNEDTLTGFPVKQVVAALINLLGMEHNFVIMTHACR
ALTYMMEALPRSSTVVVDAVPVFLQKLESIECMDVAEQCLTALAMLSRRHSKTILHAGGV
SACLKFVDFFNITAQRAALTITANCCQNLHPDDFHLVTDSLPLLTSRLANQDKKSVECVC
QAFSRLVDSFQHDPTMLHKIINAELLQNLQQLLMITPPVNSIGNFITVLRMLSVISNRCP
DLAQLLLQQNIAFTLSYLLTGSLEVKTEDVELVPRSPQEWYEITCLIEELMPPLPTDGIF
SVNSLLERTNNQQETVHWEWRDERHCCHPFSTIDSRIIEMAFQNGEDEICLSTLGRTYTI
DLTVMKQINEDIGMARSIFRRVNTNPAEGKTPNCLSSMDVVPPVIETNEWLVSFIRTLFS
VLYEVYSSSAGPAVKCKCLRALLRMVYYASTDLLRDVLKNQVVSSHIAGMLASQDLRIVI
GALQMASILMKRLPQVFGVHFHREGVLHQVRQLADPEIPLGVSPPKCPSGISLPSPQPGP
SNTPLSSTTTLSSSSATSPIASPTTNGNILIGAIATSQLKPNLTATMETRSRTDLNTSAT
DDSSTPQNAHLRIGDVLKRKRQNKKGRFSRLSNAMPQQAQQQESLFTGFTPKNSRFLGNL
NPARWGRKSSSSSATSDKRDSSSSTSLAKPPSNPSLTGGNREKAKAWVREQAAQFLARYQ
DDAPCTHPALTVLSRLTAAIQRLQSNEMDEMLSALTELRDIVLESDISPFEMNYSGLIKA
LLNYLTTTDAPGHRYDRLRMFWKLFADSTIEQDNGVLVDLNARAFGALVAKLNSCVAQLE
QFPVKVHDLPAGSGAGRGGTSALKFFNTHQLKCNLQRHPDCNNLKQWKGGTVKIDPLALV
QAIERYLMVRGYGRIRDAESMVSDDDNSEDDIDDTLAAVVISQGSAKHKLQFLIGDQVLP
FNMTVYQAVRQFGCVGVDHSEAETDGEAPLGHDAVWVQTHTIYYRPVPEDETMVSSKPGS
SSQSSSSRKGKGKSTKISSKRKEDSLWLEGTIPPPRCPLAPYLTPTLPLSVTIADASLDG
LCLLRLLHSLNRHWGVLFPHLKSIRLLSAQDFVNNKIAAKANRQLQDPLVIMTGNLPSWL
QQIAAVCPFLFPFETRQLLLYATSFDRDRALQRLLDSAPELSGSDSQERVTPRLERRKRT
ISRTDILKQAEQVIQDLASSKALLEVQYVNEVGTGLGPTLEFYALVSRELQRADLELWHG
SSTPTLGGYVNSPHGLFPTPIPWNTKVSHLAKQKTKFKFLGKFMAKAIYDSRMLDLPFSL
TFYRWLLGEEHTLTLNDLCYVCPDVYRTLCKLQDIVRRKEAIERDQTLRPAERNQLIESL
SLDGCPIVDLGLVFELPGYDNVELRKGGSELPVDVQNLDQYIKLVVHWFLYEGVFRQMEA
FREGFESVFPPSQLRLFFPEELEAVFCGHAQTGGNWDIKTLLECCRTDHGYTPDSRAIRF
LFEVMSEYKSEEQRQFVQFVTGSPRLPVGGFKSLTPPLTIVRKTFDPSMKTDDFLPSVMT
CVNYLKLPDYTTLEIMREKLRMAAQEGQHSFHLS
NT seq
6225 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcaacaagatcagtcgttgtcaggggggtctgtagagaaggccagtgcttca
gcagacgcctctaaggaaggcggtaaaagctctagcggaccggccagtgggacaagcaat
aacagtaacaacacaagcataataagcccaagcaacagtagtgctggatacaggaaacgg
cagagcagtggagaagttcagggtaatacagaggagaaaaggcgcaggcagaccttcgcc
agctctcagagtgctgctctacatactcaaaacaatctcagaaggtccgtcgattcggtc
agaggagaaaacgccaggaacaaatcagaacgcagaagccataatgccactggcttaggg
ccacccacagatacggatcggcggcacctaccaaagacgcaacagtcgaatagcggaatc
cacggtagtacgcggagtcgcaactccgccagatcctcactgcctgatttgaactcaacg
ccgatagactgtgttgcgtctcgcactcgatctagaaccccgcaaaattctcagaacaat
acgccacacggcagcagcagttgcgacgttctacttctcggacttttcaacagctatcca
cctaggaagtcatccactgctcatcatagcaattccgtacaaacacacttaggatctcct
ttaaccagccatccatcaacttcgagaggtagaggttacaaatcccaaagcctgagcagc
ggctctattagcagcacgagtagtcgggtattgggtgtaaagtccagcatcagagtgggt
aacgcagcaagtaactcagtggagagcggtggtggggcgttggcacatgagggggcaggt
acgagcggcacaacggctgcagcaactgctaacccgccttcgtcctccgccgcccactcc
tcgcagtctcacccaacgcacaaacacctgctccgttcgcgggttaagcttgctgccgat
caagccaaagaaaccatacctggtaacaaggttcaaggcaaacataacaagaaggattct
acaacgggctcctgctccagctccagacatcgctcttcgtctcgggccagaaaaccgatg
gtggagagtggttctggaggagcaggagttgtaatgtcaggcactgacgctgcagcaaat
agttctaccccaacttcagttacatctacgattccaagcggccagttgggatcatcgact
ggtgaagaggaatcagcttcaacggcaatctctgccattgcgagcggaggtccgtctgga
atgtcaggtactactggagatagtgaaagcgacgatggcgaagttggtcggcttcaagca
ctcctggaagctcgaggattacctcctcatgtgttcggagctctgggaccccggatgcag
catcttttgaacagaagtatgggcgccagttcagctgccaaagcgcaacagttattggca
ggcttacaggcagtcgacgacgagggcgagcagctgcaggctgtgataggaatgggagaa
atattagtaatgggaaatgaggacacgctgacaggttttccagtgaaacaagttgtcgca
gctttaatcaacttacttggaatggagcacaactttgttataatgacacacgcctgtcgt
gctctgacttacatgatggaagccttgcctcgttcatcgacagtcgttgtggatgccgtc
cctgtttttttgcagaagttggaatccatcgagtgcatggatgtcgctgaacaatgcctt
actgctctggctatgttatcgcgtagacacagcaaaacaattttacacgcgggaggtgtc
tcggcgtgcctgaaatttgtagactttttcaatattactgctcagcgggcggctctgaca
ataaccgccaactgttgtcaaaacttacatcctgacgattttcatctagtcaccgacagt
ttacctttgctaaccagcagactggccaatcaggataaaaagagcgtcgagtgcgtttgt
caggcgttcagtcgattagtcgacagttttcaacacgatccaactatgcttcacaaaatc
atcaatgccgaacttttacaaaacttacaacaattactgatgattacaccgccagtaaac
agtattggcaattttataactgtactacgaatgctttctgtgatatcaaatcgctgtcct
gacctggcgcagctgcttctccaacaaaacatagctttcacactcagttatctccttacc
gggtccctggaggttaagactgaagatgtggaactggtgccacgatctccacaagagtgg
tacgagataacttgtctaatagaagaactgatgccgccgctacctaccgacggtatattt
agtgtaaatagtctacttgagaggaccaataatcaacaagaaactgtgcactgggaatgg
agagacgagagacattgttgtcatcctttcagcaccatagattcaagaatcatcgagatg
gccttccaaaatggcgaggatgaaatatgcttatcaacattgggccgcacttacacaata
gacttgactgtcatgaagcagattaatgaggacattggaatggcaaggagtatatttcgt
agggttaacactaaccctgcggaagggaagactcccaactgtttgtcaagtatggacgta
gtgcctcctgttatcgaaaccaatgaatggttagtttcattcattcggacgttattctcc
gttttgtatgaagtatacagcagttctgccgggcctgctgtcaaatgcaaatgtcttcga
gcgcttctacgcatggtttattatgcttctactgatctactcagggatgtgctgaaaaat
caggtggtctcgtcgcatatagcaggaatgttggcttcccaggatctcagaattgtaatt
ggagctctgcagatggcaagcatattgatgaaaaggctgccacaagtattcggtgtacat
tttcatcgcgagggggtattgcatcaggttaggcaactggcagaccctgaaataccgctt
ggcgtgtcaccacctaaatgtccttcgggaatttccttgccaagtcctcaacccggtcca
tcgaacactccgctttcttccacaacgacattgtcgtcaagcagcgcaacgtctcccatc
gcgtcaccgacaaccaatggaaatatattgataggtgctatagctactagccaattaaaa
ccaaatctcactgccactatggagactcgcagtagaactgatttaaacaccagcgccact
gatgacagcagcactccacagaatgctcatttaagaatcggagatgttctaaaaagaaaa
cgacagaacaaaaagggccgattctcaagactgtcaaacgcgatgcctcaacaagcccaa
cagcaagagtcattgttcaccggtttcacaccgaagaatagccgcttcttgggtaatttg
aacccggctcgatggggtcggaaatcttcttcgtcaagcgccacaagcgacaaacgtgac
tccagctcttcaacgagtttagccaaaccaccgagcaatcctagtttaactggggggaat
cgtgaaaaagctaaggcttgggtcagagaacaggctgctcagttcttggccaggtatcaa
gatgatgctccttgtacacatccggcgctcactgtactttccaggctaacagcagcaata
cagcgactgcagtcaaacgaaatggatgaaatgctgtcagcattaaccgagctccgagac
attgtgttagaaagtgatatatcgccattcgagatgaactacagcggattaataaaagct
cttctcaactacctcactaccacagacgcgccagggcatcgatacgatcgcttacggatg
ttctggaagctcttcgccgattccaccattgaacaagacaatggagtgttggtcgaccta
aatgccagggcttttggtgcactcgttgccaaattgaatagctgcgttgctcaattggaa
caattcccagtaaaagtacatgatttaccggccggatctggagccggacgaggcgggacg
agcgctttgaaattcttcaacactcaccaactcaagtgcaatcttcaacgacatccagac
tgcaataatctgaagcaatggaagggaggtaccgtcaaaatagatccccttgcgcttgtt
caggccattgaacgttatctgatggtgcgaggatatggcagaattagggatgctgaatca
atggtcagtgatgacgacaatagtgaagatgacatcgatgatactttggctgcagttgtg
ataagccagggctcggctaaacataaacttcaatttctgatcggcgatcaagtcctgccg
ttcaatatgacagtttatcaagcggtgagacagtttggctgcgtgggagttgatcattcg
gaggctgaaactgacggagaagcacctctgggtcacgatgctgtttgggtacaaacacac
acaatttactacaggcctgtacctgaggatgaaacaatggtatcctcaaaacctgggtca
agttctcagagcagtagcagccggaaaggaaaaggaaagagtacgaaaataagctctaag
agaaaggaagacagcctttggttagagggaacgattccaccgccacgatgtccactggca
ccttatctcaccccgacactccctctctccgtaacaatagcagacgcttctctggacggt
ctttgtttactccgtttgttacattcgttgaatcgtcactggggtgttttatttcctcat
cttaaaagcatcagacttctatccgcccaagattttgttaataataaaattgctgccaaa
gcgaatagacaactccaagatccgcttgtcattatgactggaaatcttccttcttggctg
caacagattgctgcagtttgcccattcttatttccatttgaaacacgacaattgctcctc
tacgccacatcatttgaccgagatcgtgcactgcagcgacttcttgattccgctcctgag
ctctcaggctcggacagtcaggagcgagtaacgccacgtttagagaggaggaagcgaacc
atatcaaggacagacatcctaaagcaagctgaacaagtcattcaggacttggcctcgagc
aaagcgctgcttgaagtacagtatgttaatgaggtcggtacaggcttgggtcccacactt
gaattttatgctctggtttcaagagagctgcaacgtgcagaccttgaattatggcatgga
agttcaacaccaactctgggaggatatgtaaatagccctcacggcctttttccgactccc
attccatggaatacaaaggtttcacacctggctaagcagaaaactaagttcaagtttctt
ggaaagttcatggccaaggcaatttacgattctagaatgctggatttgccattcagttta
actttctatcgttggttattgggagaggagcacaccctaactttaaacgacttgtgctac
gtttgccctgatgtgtatcgcactctctgcaaactccaagatatcgttaggcgaaaagag
gcgattgaaagggatcaaaccttgagacctgccgaacggaatcaactgatcgaatctcta
tctttggatggatgtcccatcgttgatttgggtctagtcttcgaacttccgggatacgat
aatgtcgaattgagaaaaggtggtagcgagcttcccgttgatgtacaaaacctagatcaa
tatatcaagttagtggttcactggttcctgtacgaaggagtattcagacaaatggaggca
ttcagggagggatttgaatcggtgttcccgccttcgcagcttcgtttgttctttcctgag
gagcttgaagctgttttttgtggccacgctcagaccggcggcaactgggatataaaaact
ttgctggaatgctgccgaacggatcacggctacactccggactctcgcgcgattcgattc
ttgttcgaagtcatgtcggaatacaagagcgaagaacaacggcaattcgttcagttcgtc
actggctctcctagattaccggtcggaggcttcaaaagtctaacgccgccattaacgata
gtacgcaaaacatttgacccgtcaatgaaaaccgacgatttcctaccctctgtaatgacg
tgcgtaaattatttaaaactgcccgattacacaacgctggaaataatgagggagaaacta
aggatggctgcgcaagagggtcaacactcgttccatctgtcatag
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integrated database retrieval system
