Neodiprion pinetum (white pine sawfly): 124213223
Help
Entry
124213223 CDS
T08966
Name
(RefSeq) ribosome biogenesis protein BMS1 homolog
KO
K14569
ribosome biogenesis protein BMS1
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124213223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
npt03009
]
124213223
Ribosome biogenesis [BR:
npt03009
]
Eukaryotic type
90S particles
GTPase
124213223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Tsr1_G-like
GTP_EFTU
MMR_HSR1
AAA_22
RNA_helicase
AAA
Motif
Other DBs
NCBI-GeneID:
124213223
NCBI-ProteinID:
XP_046470248
LinkDB
All DBs
Position
2:13131514..13135808
Genome browser
AA seq
1194 aa
AA seq
DB search
MSGIDEGGVKHKSHRDRNAGRKAEKKKNKNEHVQELTDKQKNPKAFTFNSAIRAERGFRR
KQDLETKKQHIPLVDRTPLEPPPVLVALVGPPKVGKSMLMQCLIKSFARQPLSNILGPVT
VVSGKKRRITFIECNNDINSMIDIAKVADLVLLLVDASFGFEMEIFEFLNICQVHGMPRI
MGVLTHLDLIKNTKQLRKIKKTLKHRFWTEVYAGAKLFYLSGLLHDEYLRNEVKNLARFI
SVIKFRPLTWRTTHPYLLADRIEDLTPPESIRQNTKVDRTISLYGYVRGVPLNKETSVHI
PGCGDLKIKDVSFLPDPCPLPDQIKKRSLVEKERLIYAPFSGVGGIVYDKDAVYVELGGS
HSHQEKEGEDPSLVGNLMETQETIDTKLRRSEMQIFSGTALIRSEDVEEEFNTDLKSKSV
IEEQRIRRKVVFDDEMNELPNDEEDSDDEVDFGKQNYDSDGDELESNERSKRICSEADDG
IICKRKKIVDEDGNVSVKFIKNKDQAITDCEQIYRGLSSNPDSHIKDKISQALSMLDSNK
KNRDDRSEADLSENESFDEESDDNDSELNSNDDVHVEDELQWKSNLTEKASEAFTDRLRS
QKNLMKIVYGEFDKSFVAVDDELLSDEDSKNEDIGGIFRIVNKQERQKLEARELRNQEES
VFYSIDLSKDWELEENRNLLTNRFVTGKWKESEDAEELLKLDDLEDDDDLYGDFEDLETG
EKHKAEAPEEMTFSEADERRKLIEKKQKLKEKFDSEYDKGEDKSYYDELKSEVERQAQLN
KSEFEGIADEIRVQLEGFRPGMYVRVELDSVPCELVTNLDPTYPLIVGGLLHGEENIGFV
QTRIKKHRWYKKILKTKDPLIISVGWRRFQALPIYAKLEDNLKHRMLKYTPEHVTCMAHF
WGPITPQGTGVLAVQDVAARQAGFRIAATGSIVELDKSTYIVKKLKLTGAPFKVYKKTAF
IKGMFNSSLEVAKFEGAKLRTVSGIRGQIKKACSKPQGAFRATFEDKVLLSDIVFCRTWY
KVDVPKFYSPVTSLLLPPSEKNQWRGMRTTGQLKRENNLRAQPNSDSLYTQIKRDPKVFK
PLIIPRTLQKGLPYKDKPKLQPVIKNHRPKLEDRRPAVVREPKEEQVAKLMKMLRTSYSH
KQDQLKEAMSRRIMAHQARMQIEEARKMGRQKELKKEVFRKLSKMEAKNKNKRN
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaattgacgaaggaggggttaagcataagtcgcatcgtgatcgcaacgcgggg
cgaaaggcagagaagaagaaaaacaaaaatgaacatgtccaagagttgacagacaagcaa
aagaacccaaaagctttcacattcaattcggccataagagctgagcgtggtttcagacgt
aaacaagaccttgaaacaaaaaaacagcatataccgttggtggatagaacgcctctggaa
ccaccgccagtcttagtggctctagttggtcctccaaaagtgggcaaatcaatgctaatg
caatgtctaataaagagctttgctaggcagccactgtcgaatattcttgggccagtaact
gttgtttctggtaaaaaacgtcgcataacattcattgaatgcaacaacgacatcaatagc
atgattgacatagcaaaagtagctgatctggttttgctcctggtggatgcgtcgtttggt
tttgaaatggagatatttgagtttctaaacatatgccaggtgcatggtatgccgagaata
atgggtgtgctgacgcatctggacctcataaagaataccaagcagttgagaaagatcaaa
aaaacactgaagcacagattttggactgaagtttacgctggagccaagctattctattta
tctggacttctgcatgacgagtatctccgcaatgaagtgaagaatctagctcgtttcata
tcagtgatcaagttcaggcctctgacttggcggaccacgcatccgtaccttctggcagac
aggatagaggatctcactcctccagaatccatcagacaaaatacaaaagttgacagaacc
atcagtctctatggatacgtgcgcggtgttcccctgaacaaggaaacttctgtacatatt
cctggctgcggagacctcaaaatcaaggatgtcagtttcttgcctgatccttgtccgctg
cctgatcaaataaagaaacgctctctcgttgaaaaggagagactaatctatgctccattt
tcgggagttggcggtatcgtctacgataaggatgccgtctatgtggaattgggagggagc
cactctcatcaagagaaggagggagaggatccgagtctggttggcaatctgatggaaacg
caggaaaccattgacaccaagttgcgtcgtagcgaaatgcaaattttcagcggcacggca
ctgattaggtcagaagatgtcgaagaagagttcaatactgatttgaagagtaaatcagtt
atcgaagaacaaaggatcaggcgcaaagtagtattcgacgacgagatgaacgagctacct
aacgacgaagaagacagcgacgatgaggtggatttcggtaagcaaaattatgattcggat
ggagatgaactggaaagtaatgagaggagtaaaagaatctgttcagaggcagatgacggg
attatttgtaaaagaaaaaaaattgtagacgaagatggaaatgtatcagtgaaattcatt
aagaacaaagatcaggctataactgattgtgagcaaatatatcgcggacttagcagtaat
cccgatagtcatataaaggataaaatctctcaggcattgagtatgctggacagtaataaa
aaaaatcgggacgacagatcagaggctgatctcagcgaaaatgaaagttttgacgaggag
agtgatgataatgattctgagctaaattcgaacgatgatgttcatgtggaggatgagtta
caatggaagtcaaatctgacggaaaaggcaagcgaagcatttacagaccggctgagatcc
caaaaaaatttaatgaaaattgtgtacggcgaatttgacaaatctttcgtagctgtcgat
gatgaattgctttcggatgaagattcaaaaaatgaagatattggcggtatttttcgcatt
gtaaataagcaggagaggcagaaactggaggcacgagaactgcggaatcaagaggagagc
gtgttttactccatagatttgtcaaaggattgggaattggaagaaaaccgcaatctgcta
acgaatcgttttgtgactggtaaatggaaggaatctgaggatgccgaggagctgttgaag
ctcgacgacctggaagatgacgacgatttgtacggagatttcgaggatctagaaaccggg
gaaaagcacaaggctgaggctcctgaagagatgacattcagcgaggcggatgagcggcga
aagctgattgagaagaagcagaagcttaaggagaagttcgactcggagtatgacaagggt
gaagacaagtcctactacgacgagttaaagtcggaagtcgagaggcaggcgcagttgaac
aagtctgagtttgagggcattgcggacgaaatcagggtccagctcgagggtttcaggcct
ggaatgtacgtccgtgttgagttggactcggtgccctgtgagctggtgacgaatttggac
ccgacctacccgctgattgtcggtggactgttgcatggcgaggagaacattgggtttgtg
cagactcggataaaaaagcaccggtggtacaagaagatcctgaagaccaaagacccgctg
attatctctgtcggctggcggcggttccaggctttgcccatctatgcgaagctcgaagac
aatctgaagcataggatgctgaagtacacgcccgagcatgtgacttgcatggctcatttt
tggggccctataactcctcagggcaccggagttctggcggtgcaagacgtagccgccagg
caagcaggatttcgcatcgcggcaaccggctcgatagtcgagcttgacaaatccacatat
atcgtcaaaaagctcaagttgactggtgccccgttcaaggtttacaagaagacagcattc
atcaaggggatgttcaattccagcttggaagtggccaagtttgaaggcgccaaattgcgg
actgtgtccggcattcgtggacagataaagaaggcatgttccaaaccacagggtgccttt
cgtgcaacctttgaagacaaggtgttgctcagtgacattgtgttttgtcgaacctggtac
aaggtagatgtaccgaagttttacagtcccgttacatcgctgctgctgccgccgagtgag
aagaatcaatggcgaggaatgaggacgactggtcaactcaagagggagaataatttaagg
gctcaacctaattcggattcactttatacacagatcaaaagagatccgaaagttttcaaa
ccactgatcataccgcgaactctgcagaagggtttgccatacaaagacaaaccaaaatta
caacctgttatcaaaaaccatagaccgaaactcgaagatcgacgaccagctgtcgttaga
gagcccaaggaggaacaggtagccaaactaatgaaaatgcttagaacttcgtacagccat
aaacaggatcaactgaaagaagcaatgagcagaaggattatggcccatcaagcccgaatg
cagattgaagaagcaaggaaaatgggcaggcaaaaagagttgaagaaagaagtgttcaga
aaacttagtaaaatggaggctaaaaataaaaataaaagaaactaa
DBGET
integrated database retrieval system
