Neodiprion pinetum (white pine sawfly): 124213253
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Entry
124213253 CDS
T08966
Symbol
Cul4
Name
(RefSeq) cullin-4A isoform X1
KO
K10609
cullin 4
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03420
Nucleotide excision repair
npt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124213253 (Cul4)
09124 Replication and repair
03420 Nucleotide excision repair
124213253 (Cul4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npt04121
]
124213253 (Cul4)
03400 DNA repair and recombination proteins [BR:
npt03400
]
124213253 (Cul4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
npt04147
]
124213253 (Cul4)
Ubiquitin system [BR:
npt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
124213253 (Cul4)
DNA repair and recombination proteins [BR:
npt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
124213253 (Cul4)
TCR (transcription coupled repair) factors
Cul4-CSA complex
124213253 (Cul4)
Exosome [BR:
npt04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124213253 (Cul4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
HbrB
DUF2018
Motif
Other DBs
NCBI-GeneID:
124213253
NCBI-ProteinID:
XP_046470331
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All DBs
Position
2:12856603..12865004
Genome browser
AA seq
817 aa
AA seq
DB search
MSRIGRTQLLPTAQVKRSVPTDSVVNFNHSAKRARHPNGTTGSSATAGQLEEIENMTDSA
ANTQKRANFSALTVASPNGVNKISANATNAKPGSAKKLIIKNFKNKPKLPDNYQERTWEK
LREAVVAIQTSKSIRYSLEELYQAVENMCNHKMASTLYANLTELTESHVKANIEQFLAES
MDRHIFLKKMNECWQSHCRQMIMIRSIFLYLDRTYVLQNPSISSIWDMGLHLFRLHIVLN
NLVQTRSVEGLLMLIEKERQGDTVDRTLLKSLLRMLSDLQIYQEAFEAKFLVATERLYAA
EGQRLMNEHDVPEYLAHVDKRLQEENERLLHYLDTSTKWSLIHTVEKQLLSEHITSLLQK
GLSGLLDENRTSDLSLLYNLYSRVKNGLIELCLNFNSYIKKKGRTIVIDPEKDKTMVQEL
LDFKDKMDNIVNTCFHRNEKFGNSLKEAFEAFINQRANKPAELIAKFVDCKLRAGNKEAT
EEELERLLDKIMVLFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGG
GFTSKLEGMFKDMELSKDINIAFKQYAGNLQNEFSASNLDLTVSILTMGYWPTYPVLEVT
LPAEMVQYQDVFNKFYLGKHSGRKLQWQPTLGHCVLKAWFNQGNKELQVSLFQALVLILF
NDTDNLSLEDIKAATNIEDGELRRTLQSLACGKARVLQKNPRGRDVADNDRFVFNAEFTN
KLFRIKINQIQMKETNEEQKATEERVYQDRQYQIDAAIVRIMKMRKTLTHNLLISELYNQ
LKFPVKPADLKKRIESLIDRDYMERDKDNANQYNYVA
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtctagaatcgggagaacccaactcttgccgacagcacaggtgaaaagatcggtgccc
actgactcggtggttaatttcaaccacagtgcgaaacgcgcgaggcacccgaacgggaca
acgggaagcagcgcgacggctgggcagctcgaagagattgaaaacatgaccgactcggcg
gcgaacacccagaagagggcaaatttctcggctctgactgtcgccagtccgaatggggtt
aacaaaatatcagctaacgcaacgaacgcgaagccaggatcggcgaaaaaactgataata
aagaacttcaaaaataagcccaaacttcctgacaattaccaagagcgtacgtgggaaaag
ttgcgggaggcagtcgtcgccattcagactagcaaaagcatccggtattctttagaagaa
ttgtaccaggctgtggaaaacatgtgcaatcacaaaatggcctcgactttgtatgccaat
ttgacagagctcaccgaatcccacgtcaaggctaacatcgaacagtttttagcagagtct
atggataggcatatatttctcaaaaagatgaatgagtgttggcagtctcactgtcgacag
atgattatgataaggagcatattcttgtaccttgacagaacctatgttcttcaaaatccc
agcatctcatccatatgggatatggggctgcatttattcagacttcacatagtcttaaac
aacttggtgcagactagatctgtcgaaggattgcttatgctcatagaaaaggaacgccaa
ggggatacagtggaccggactcttctaaaatccttgctgagaatgttgtctgatctacaa
atttaccaagaagcctttgaagccaaatttttggtggctacggaaagattatatgccgca
gagggacaacggcttatgaacgaacatgacgtgcctgaatatctggctcacgttgacaaa
cgtcttcaggaagagaatgaacgactgttgcactacctcgatacatcaacaaaatggtcc
ctgatacatactgtagaaaaacaattattatcagagcacataacaagccttttacagaag
ggtcttagcggtttgttggatgaaaatagaacgagcgacttgtcgcttctctacaatttg
tacagccgtgtcaaaaatggcctgattgaactttgccttaactttaattcttacattaag
aagaagggaaggacaatagtgatcgatcctgaaaaagacaaaactatggttcaggaactg
ttagatttcaaagacaaaatggacaatatagtgaacacgtgttttcaccgaaatgagaag
tttggcaacagtttgaaggaagctttcgaagctttcataaaccaacgggcaaacaaaccg
gccgaactaatagccaaattcgtcgactgcaagctacgtgcaggaaacaaagaggcaact
gaagaggaactcgaacgattactcgacaagatcatggtgctgttccgttttattcatggt
aaagacgtgtttgaagcattctacaaaaaggatcttgccaaacgtttgctggttggaaaa
tccgcgtctgtcgatgctgaaaagtcgatgctctcaaaactgaagcaagaatgcggcggt
ggatttactagcaaacttgaaggaatgttcaaggatatggaacttagtaaagacataaat
atagccttcaaacaatacgcaggcaatctccaaaacgaattttcggctagtaatttagat
ctcacagtatctatattgacaatgggatattggccaacttatcctgtactagaagtgacc
ttacctgctgaaatggtacagtatcaagacgtgttcaacaagttttatctcggcaagcac
agtgggagaaaattacagtggcagccaacactaggacactgcgttctcaaagcgtggttc
aatcagggcaacaaagagctgcaagtgtcattgttccaagcacttgttttgatactattc
aacgacacagataatctttcccttgaagatattaaagctgcaacaaatatagaagatggt
gaacttcgaagaactctgcaatcgttggcctgtgggaaagctagagtattgcaaaagaat
cctcgaggcagagacgttgctgacaacgacaggttcgtcttcaacgcggaattcacgaat
aaactcttcagaattaagatcaaccaaatacaaatgaaagaaacgaacgaagaacaaaaa
gcgacagaggaaagagtttatcaagataggcaataccagatagacgcggccatagtcagg
attatgaaaatgcgaaaaacattgacacacaatctactcatcagtgaactttacaatcag
cttaaatttccagtcaagcctgcagacttgaagaaaagaatcgaatctttgatagataga
gattacatggagcgcgataaggataatgcgaatcagtacaactacgtagcgtaa
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