Neodiprion pinetum (white pine sawfly): 124213286
Help
Entry
124213286 CDS
T08966
Symbol
cyst
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npt04131
]
124213286 (cyst)
Membrane trafficking [BR:
npt04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124213286 (cyst)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
DUF4407
NleF_casp_inhib
C1_2
PH
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
124213286
NCBI-ProteinID:
XP_046470420
LinkDB
All DBs
Position
1:complement(40065319..40086519)
Genome browser
AA seq
1519 aa
AA seq
DB search
MFAKRQWKLKRVFNATQCFLKLYKTDECPNSGEDSDEDVITDYLSSANPNDSRVARGTDD
ELDGLTLDGGASESEYTKDGSSVIVMSDRGLDQLKQQPGGIGAQLRSTGPLVPIISVTPH
SPGFAKHYPVLDDNLRQLHEIHESIQRMRDLTLTTTGHNARSRLHRHHTQRLSSSCPSLC
PLNPVPLRTHEHQDTSSDPDLLVDGSANSSPTHFPSSNRHLPHGSQGVDRRRSWTDLEDS
RRGSRHSGQDHHLHLQARTMDETNILNDFSFQRQRSISLSSLESELDLDLDSKPHPTGTV
PGSKASRSQASTHSLNEADLIQGDFQKIVAKRERLGESGGLMPGITGSRLPLQKSISTPS
IVTPPVHTHLTDSGTRTTPLLTAILHGPGRHDRGSGSETETEDLIPQRSHGFHGDLAREG
TPNAQASFDELLTDGVVDDDNHSEKTRRKRGSLFFRKKKDKSGKKANQSQQHQWVTVAAA
SHQSGATCDFCTKQLVANKPALHCENCGATVHQSQGCKDQLTLECVKQKQHSSKSGSKSV
SGTPAATNNAKRGSTSSLPPPLSTNSGREISNKKTATGYSPWRRVATKLGVNQTINEERD
GDSTGHHREAPSNWEEHEFGEESHQFNVGDLEGLDPELGLGKEEPDSWTAAVGRNVARGL
VNSCEREVKRQEHIYEFVLTEKHHCLVLLAMERIFADGLRRHFGLPPTDLERMFPRLRDL
TDIHLKFLLKLRRRQQSNSVVPTIADILIEQFSGGNATSMKSAYGDFCSRHREAVNAYKY
YYRSEPRFVRFVRHCQANPLLKKKGIPECILFVTQRLTKYPLLVEPLIKTGVASHEVEDL
RQALLLVKQILGDVDAQVADKERADRKLEIYHRIEAKSFATHRGMKFKKSDVLGSNRTLK
FEGTAFLMQGRSKMAPVVVVVLSDVLFFLAETRDQKYAFFAPDNKAGVVSLQKLLVREKA
GQESRGIYLISSNPSDPEMFELKVQKPKDKQLWIQAIRAAVETCPQDLENENDELGNNGE
NEHRDNRSSSVSTISAEERQRIVDAKQSHIRDIVDELRKKDVEQAALLEEKMGLQLRLRS
ATGVWNTNESDNERESREDRELPDCSKLVPDYKRLVHADIGLVWSEAVVAVQKAMRLASS
LSFSTGSATLSRSLSSAGERHSEAYVPPALCVPRRAETFAGFDHNKERSPWRDNTTLNSV
IPPMKIGHLLSELGEGKEDEEADTATDGNRDQQLAAVQLSHYVYRLFCIVAIQMTTINSL
QAQLAAWKDGSGKSTNNRPNPNRQLEELRNLQDQLSREKAAWRASTQQERTELDEQRAQL
SRLRDQLTAEQRDVTQQRDQLYRRLEALERQGVSLVTPAATGAAPAHGSQSTDTLPSRKS
QDNKRIPLNLISATNQQKVQSSLPPVKQQLPLKLASGSNNNNSRSSSIIANNSPDRHSRA
GSSPAIVTSSSFSSPDLSSSNSFSNINTNTQTRLRATRSPPEQPHHHHHNQQQQSQQSQQ
QQHQQQRTEQPLEEEVIFF
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccaaaagacagtggaaattgaagagggttttcaacgcgactcaatgtttcctg
aagctttacaagacagacgaatgtccgaacagcggagaggacagcgacgaggatgtaata
acggattacctgagttccgcaaatcccaacgatagccgagtagccagaggaacagacgac
gagttggatggtttgacgcttgacggaggtgcctcagagtccgagtatacgaaggacggg
tcttctgtcattgtaatgtcggacaggggtctcgaccagctcaagcagcagcctggagga
atcggtgcacagctgcgctctacggggccactggtaccgataattagtgtgactccccat
tctccaggatttgcaaagcactatcctgttcttgatgacaaccttcgtcaactgcacgag
atacacgaaagcattcagcgaatgcgggatttgacgctgaccactaccggtcacaatgct
cgctcccgcctccatcgtcatcacacgcaaaggcttagttcttcttgtccctcgctttgt
cctctaaatcccgtccctctccgtactcatgagcatcaagataccagctctgaccccgac
ttgttagtcgacggttcggcaaacagttcgcccacccattttccctcatctaatcgtcac
ttgccccatggaagtcaaggagtcgacagacgacgaagttggaccgatcttgaggattca
agacggggttcgcgccactctggacaggaccatcaccttcatctacaagcccgaacgatg
gatgaaacaaacatcttgaacgatttttcgtttcagcgtcagcggagcataagcctcagt
agcttggagagtgaactagatttagatttagatagtaagcctcaccccactggaacggta
cctggaagcaaagcgtctagatcacaagccagtactcattcactcaacgaagcagatctt
attcagggtgactttcagaagatcgttgcaaagagagagaggctgggcgagagcggagga
ctgatgcccggaattactggctctcgtctaccactgcagaaatccatttcaacaccctca
attgttacaccccctgtccacacgcatcttactgattctgggactcgaactactccttta
cttaccgctattctacatggcccgggacgtcacgacagaggcagcggaagcgagacagaa
acggaggatcttattccacaacgaagccacgggtttcacggagatttggccagagaaggt
acacccaatgcacaagcctcctttgacgaactacttacggacggagttgtggacgacgat
aatcattctgagaagacacgtcgaaagcggggatctctattctttcgtaagaagaaagat
aaaagcggcaaaaaagcaaaccaaagtcaacagcaccagtgggtgacggtagctgcagct
agtcatcaaagcggggcaacatgtgatttttgcaccaagcagctggtggccaacaagcca
gctctacactgtgaaaattgcggagctactgttcatcaaagtcaaggatgcaaggatcag
ctgacgttggagtgtgtcaagcagaagcaacattcatcaaaatcgggatccaagtccgtg
tctggcactccagcagcgaccaacaatgctaagagagggtcgacgtcttcattacctcct
cctttgtcgacgaacagcgggagggagattagcaacaagaaaaccgcaacgggatacagt
ccttggcggcgagtcgccaccaagctaggagtcaatcaaacgatcaatgaggaaagagac
ggggatagcactggacaccatcgtgaagcgccaagtaactgggaagaacacgaatttggc
gaagagagtcatcagtttaacgtcggtgatttagaggggctggaccctgagttgggcttg
ggaaaagaggaacccgattcatggactgcagccgtggggcgcaatgtagccaggggtctt
gtaaatagctgcgagcgcgaagttaagcgacaggagcacatatacgagtttgtcttgaca
gagaaacatcactgccttgttttactggctatggagcgaatattcgctgatggccttagg
cgtcattttggcctaccacctacagatctcgaacgaatgtttcctcggctacgagatctt
acagatattcatctaaagtttctgttaaagctgaggagacgccaacagtccaactctgtt
gtgccaactatagcggacattttgatcgaacagttttcagggggtaatgctacatcaatg
aaaagtgcgtatggtgatttttgtagtcgtcaccgtgaagcagtgaatgcctacaaatac
tattatcgcagcgagcccagattcgttcgctttgtacggcattgccaggcaaatcctctc
ttgaagaagaaaggcattccagagtgcattctcttcgtcacccaacgattgacaaaatac
ccgttgctcgttgaacctctgatcaagacaggggttgcatcccatgaagtcgaggatcta
cgccaagcgttgcttcttgttaagcaaattttaggggatgtcgatgcccaagttgccgac
aaggagcgagctgatcgaaagctagagatctatcacagaatcgaggctaagtctttcgcc
acgcatcggggtatgaagttcaaaaagtcggatgtgctaggaagcaatcgtaccctcaaa
tttgagggtacagcattcttgatgcaaggtcgtagcaaaatggcacctgtggttgttgtc
gttctatcggatgtattattctttcttgctgaaacaagagatcagaaatatgcattcttt
gcaccagataacaaggctggtgttgtctcacttcagaagctacttgtgagagagaaagct
ggacaagaatccagaggcatttatttgataagcagtaacccctcggatccggaaatgttt
gaactgaaagtgcaaaaacccaaggacaaacagctctggatacaggcaataagagctgca
gttgaaacatgtccgcaggatttagagaacgaaaatgacgaactgggtaacaacggagaa
aacgaacatagggataaccgttcctcatctgtatcaacaatatctgccgaagaaagacag
cgtattgtcgacgcgaaacagtcacatatacgcgacattgtcgatgaactgcgaaaaaaa
gatgtagaacaagccgcgttactcgaagaaaagatgggattgcaattgagacttcgatct
gctaccggtgtgtggaacacaaatgaaagtgacaacgaacgagagagtcgagaagacaga
gagttgcccgactgcagtaaattagtgccagattacaaacgacttgtgcacgctgacata
ggtttagtctggagtgaggctgttgttgctgttcagaaggcgatgcgacttgccagttca
ttgtcatttagtacaggaagtgcaacactttcacgtagtttaagctccgctggtgaacgg
catagtgaagcctatgtgccgccagcactgtgtgtacctagacgtgcggaaacgtttgct
gggtttgatcacaataaggagcgttccccgtggcgcgacaacacaactttgaattctgtc
attccgcccatgaagattggtcatttattaagtgaattgggtgaaggaaaggaggatgaa
gaagcagacactgcgaccgatggaaatcgagatcaacaattagctgccgttcagttgtca
cactacgtttataggctcttttgtatagtcgcgattcaaatgacgacgatcaacagtctc
caagcacagctagcagcttggaaagacggaagtggaaagtcgaccaataaccgaccaaat
ccgaatcggcaactggaagagctacgcaatctgcaggatcaacttagccgtgaaaaggcg
gcgtggcgtgcgtcaactcaacaagagcgtacggaactggatgaacagcgggcccaactt
tcaaggttacgggatcaacttacggccgaacagcgtgatgtcacgcaacaacgcgatcag
ctgtatcgccgactcgaagcgttagagaggcaaggtgtttctctggtaacaccggctgca
accggagctgcacctgcacatggaagccaaagtactgacacattgccatcgcggaaaagt
caggacaacaaacgtataccattgaatttgatcagtgctactaaccaacagaaagttcag
agcagccttcctccagtcaagcaacagctgcctttgaagctggccagtggcagcaacaat
aataattctagaagctcgagcatcattgccaataacagccctgatcgtcactcaagagct
ggtagcagtccggcaatcgtgacaagctcatcgttttcatcacctgaccttagtagcagc
aatagttttagcaatattaacaccaacacgcagactcgattacgagcaacacgttcgcct
cctgaacagccgcatcatcaccaccacaaccaacagcagcagtcgcaacaatcacaacag
caacaacatcaacagcaaaggacggaacaacccctagaagaagaagttatatttttctga
DBGET
integrated database retrieval system
