Neodiprion pinetum (white pine sawfly): 124213293
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Entry
124213293 CDS
T08966
Symbol
Rabex-5
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
124213293 (Rabex-5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npt04131
]
124213293 (Rabex-5)
Membrane trafficking [BR:
npt04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
124213293 (Rabex-5)
Protein recycling
Other Rab GTPase associated proteins
124213293 (Rabex-5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
DUF3038
CAF1
LSU
DExH14_plug
Motif
Other DBs
NCBI-GeneID:
124213293
NCBI-ProteinID:
XP_046470440
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Position
2:2179155..2183624
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AA seq
622 aa
AA seq
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MYSIKTPTLRIDEADLKCKNGCGYFGNEEWQGYCSKCHREHLQKQRAQREHARIHESDSS
SKTTVHGFYKFEEKKRQQEKKTKLLKLSVFRKTATKTQGFSEIWQELVKDNPELDKVKSE
TRDLLVQIAKTPAEKDVRKCIHSFVNNILQMKDIKSVEELSELTQNFYQVFAKRMENSPN
YADVSPETKERLLDYIERYTMTLLYRILFCPPSTTDEDKDLAIQNRIRQLNWVSGKNLEC
RIHETSSDVRELVYTSITDLLNMDSVKAPQEKLACVVHCCRNIFVLLQQSVGGPASADEF
LPALIFIVLKANPARLKSNINFITRFCNASRLMTGEGGYYFTNLCCAVSFIENLTAESLN
MPQKDFDAYMSGARVPASTWESALTMCESIHLMCEHITLLDELKTKNLEIIAESDELKKK
MIQFPEKVEAEVDAAITRTPLIITPSQRIPTNLDCVDAESYQLPPPIIPQVQNIDIYPQT
LNDETNETLTSHVGDYNGPSIEDCITPSPTFDFPAFDSDGGLHGSKGDDDTSLISLDTQC
DLTAEESYLQDRDASDSLLDESQASGTNLPSPLKPVCSLREDYHGFSIQGSNIPTIPCNT
GDLSHNTSDLEADNYSGYFHNI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtactcgatcaagacgccgactctccgcattgacgaggccgatttaaagtgcaaaaat
ggttgtggatattttggaaacgaagaatggcaaggctactgtagcaaatgtcacagagaa
catttgcaaaagcaacgggctcaaagagaacacgcccgcattcacgaaagtgattcaagc
tctaagactaccgtgcacggtttttacaaatttgaagaaaagaagcgacagcaagaaaag
aaaactaaactattaaagctgtcagtctttcgcaagaccgcaacgaaaactcaaggtttt
agcgagatatggcaggagctggttaaggataatcctgaacttgacaaagtgaaatcggag
acccgtgaccttctggtacagatcgctaagactccggctgagaaagatgtacgaaagtgt
attcattccttcgtgaacaacatcttacaaatgaaggatattaagagcgttgaggagcta
tccgaactaactcagaacttctatcaagtatttgccaagcgaatggaaaacagtcccaat
tacgcagatgtttctccagaaacaaaagaacgactactagactacatcgaaagatacact
atgaccttactctataggatacttttctgcccgccatcaactacagatgaggacaaggac
cttgctattcaaaacagaatacggcagttgaattgggtgagcggaaagaatctggagtgt
cgaatccacgaaactagttctgacgtgagagagcttgtttacacctcaataacagattta
ttaaatatggactctgtaaaagcaccgcaagagaagcttgcctgtgttgttcattgttgt
agaaatatatttgtactactgcaacaatctgttgggggtccagcttcagccgatgaattt
ttaccggcgcttatattcattgtgctgaaagctaatcctgcaagattgaaaagcaacata
aatttcatcacccgattctgtaatgctagcagattaatgactggtgaaggaggttactac
ttcacaaatttgtgttgcgcagtatccttcatagaaaatcttactgccgagtcattaaac
atgcctcagaaagatttcgatgcatatatgtcaggagcacgcgttccagcgagcacatgg
gaatctgctctcactatgtgcgagagtatacacctgatgtgcgaacacataacactgctg
gatgaattgaaaacgaaaaatttggaaatcatagcagaatccgatgagcttaagaaaaaa
atgatacaattcccagaaaaagttgaggcggaagttgacgctgcgataactcgcactccc
cttattatcacgccgagtcaaaggataccgactaatcttgactgcgttgatgcagagagc
taccagctaccaccaccaattataccacaagtacaaaatattgatatttaccctcaaacc
ctgaacgacgaaacaaatgaaacactgacatctcacgttggtgattacaacggaccttcg
atcgaggattgcataacaccatctccaacttttgatttcccagcctttgactcagatggt
ggtttgcatggaagtaaaggggatgacgataccagcctaattagcttggatacacaatgc
gatcttacagcagaagaatcgtatctacaagacagagacgcctctgatagtttgctagac
gaatcgcaagcatcgggcactaatttaccatcgcctctaaaaccagtttgttctctacgt
gaagattaccatggattctcaatccaaggttctaacattcccacgatcccgtgcaacact
ggtgatctttctcacaacacttcggacttggaggcagataactattctggctactttcac
aacatttga
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