Neodiprion pinetum (white pine sawfly): 124213310
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Entry
124213310 CDS
T08966
Symbol
HBS1
Name
(RefSeq) protein HBS1 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124213310 (HBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npt03019
]
124213310 (HBS1)
Messenger RNA biogenesis [BR:
npt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
124213310 (HBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
MMR_HSR1
GTP_EFTU_D2
Zfx_Zfy_act
AAA_22
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
124213310
NCBI-ProteinID:
XP_046470473
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All DBs
Position
2:2423766..2429092
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AA seq
691 aa
AA seq
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MSRHRNVRSMNYSDEYDGYDDVYGHSVEDDYCVSPSVSILAEQFLFDRNKQHNISSYITE
DDIVEEDETQEETPLPPSYKRPELSVLDATKLESCIEAIKNVVGDSIPESTLTENILKHN
LNSEAALDAILATTSSNNASEKPAINQNNEDLLQGKKLAAKPAVPVLLSSPAVKVIPSAT
RSVVKGFDISGTDGDFLNTTVESPRSQSPFSGQTSPDIRRKDIKTVSTKSNTPRCQSPAV
EQDNKSKLNSKKLDAISLFKNLRGDIKEQLHLVVVGHVDAGKSTLLGRLLCDLGQVSSKL
LHKFQTESKKIGKQSFAYAWVLDETGEERERGITMDVGHSKFETATKTITLLDAPGHKDF
IPNMIMGATQADVALLVVDATRGEFETGFDSGGQTREHALLLRSLGVSQLAVVINKLDTV
DWSKDRYDEIVEKMRVFLKQAGFRDAVPFVPCSGLSGENLVSKSKEEGLIKWYNGPTLTE
VIDQFKCPKRPVDQPFRFSVNDIYKGTGSGFCVSGHVETGMISTSDKVLVLPHNEVASVR
GLQIDEMPVTNGFAGDHLVFTLTGIDQQIIAVGDLLCDPQHPVPVTTRFEAHIVIFAVAM
PITRGLPVVMHHQSLVEPVVLKKLIAQLHKSSGEVIKKKPRCLPKNSSAIVEIETQRPIC
MELYRDVKQLGRIMLRVGGSTIAAGLVTKIY
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgacacagaaacgtccgttctatgaattactctgatgagtatgatggatatgat
gatgtttatgggcattccgttgaagatgattattgcgtttctccaagtgtttcaatttta
gcggaacaattcttatttgaccgaaacaagcagcataacatttcttcatacattacggaa
gatgacatagtggaggaagatgaaactcaagaggagaccccattgcccccgagctataaa
aggccggaactctcagttcttgatgcaacaaaactagagtcctgcatcgaagctataaaa
aatgttgtcggtgactctatccctgagtccacactcacggaaaatattctcaagcataac
cttaactcagaagctgcacttgatgctatacttgctactacgtcgtcaaacaatgcatct
gaaaagccagccatcaatcaaaataatgaggatcttcttcaaggtaaaaaactagccgct
aaaccagcagtacctgtgctactatcctcccctgctgtaaaagtaattccatcagcgaca
cggtcggtcgtcaaaggcttcgacattagtggaacagacggagatttccttaacacaaca
gttgagagtccgagatctcaaagtccattctccgggcaaacctcacctgatattcgaaga
aaagacattaaaacagtttcaacaaaatcaaacaccccaagatgtcagtccccagcagta
gaacaagataacaaatcgaaattaaatagtaaaaaattggatgcgatcagcctgttcaag
aatcttcgtggagacataaaggagcagttgcacttggtagtcgtcggccatgttgatgcc
ggaaagagcacattactgggtagactgctctgcgatctaggacaggtgtcttcaaaatta
ttacacaaatttcaaactgaaagcaagaagattggcaagcaatcgtttgcatatgcatgg
gtgcttgatgaaactggcgaagaaagggaacgtggtatcacaatggacgttggccactcc
aaatttgaaaccgctactaaaactattacacttttggatgccccaggtcacaaagacttt
attccaaacatgattatgggtgcgacccaagccgacgtggctcttctagttgttgatgct
acgagaggagaatttgaaactggttttgacagcggtggacaaacaagagaacacgctttg
cttttacgctctctcggtgtctctcagctggcagtagtaataaacaaattggataccgtt
gactggtccaaggatagatacgatgaaatagttgaaaagatgagagttttccttaagcag
gctggttttcgagacgctgtaccatttgtaccatgtagcggtttgtccggggaaaattta
gtctccaaatccaaggaggaaggactgattaaatggtacaacggacccaccttgaccgaa
gttatcgatcaattcaaatgtccaaaacgacctgttgaccaacccttcaggttttcggtg
aatgacatttacaagggaactggctcaggattttgtgtatcgggacatgttgagactggg
atgatttctacgagtgataaggtgttagtactacctcacaacgaagtcgcttctgtccga
ggcttacagatagacgagatgcctgtaacaaatgggtttgccggcgaccatcttgtcttc
acattgacagggatagatcagcagattatagctgttggcgacttgttgtgtgatccccag
cacccggtcccagttacgactcgattcgaagcgcacatagtaatatttgctgtagcgatg
ccgattactcgtggccttccggtagtaatgcatcaccaatcgctcgtggagccagtggtg
ttaaagaaactcattgctcagctccacaaaagttctggggaagtgataaaaaaaaaacct
cgatgtctgcccaaaaattctagcgctatcgttgaaatagaaactcagagacctatttgc
atggaattatacagagacgttaagcaacttggcagaattatgctgcgtgtgggtggttct
actatagctgctggtttggttactaagatatactaa
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