Neodiprion pinetum (white pine sawfly): 124213442
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Entry
124213442 CDS
T08966
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124213442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
npt03009
]
124213442
Ribosome biogenesis [BR:
npt03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
124213442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
RuvB_N
AAA_16
AAA_22
AAA_33
AAA_5
TIP49
AAA_14
RNA_helicase
Mg_chelatase
AAA_28
AAA_2
Rad17
AAA_18
IstB_IS21
nSTAND3
NACHT
AAA_17
ABC_tran
TsaE
ATPase
Parvo_NS1
Zeta_toxin
AAA_7
Viral_helicase1
Sigma54_activ_2
Sigma54_activat
AAA_11
Vps4_C
DUF815
DUF6775
TPR_5
Motif
Other DBs
NCBI-GeneID:
124213442
NCBI-ProteinID:
XP_046470759
EnsemblRapid:
LOC124213442
LinkDB
All DBs
Position
2:complement(37873751..37879739)
Genome browser
AA seq
970 aa
AA seq
DB search
MNKFVKLNTSLDIIPLQGSSNEDKSKNTNRQRIDELPRSVMRDPLMVSRVYAFLLDNEDK
TYIDVNEIADYLQKRYRDYRTKKRSAFRAMVRKAYNEIADGLAKKNEFNPNAPWQEDEDD
DDEEVDLELDAPIDSLNNQLLKMYKKNLDGQNGNSSDKELIDISSDDEQGKMEATSSGHA
KKPKESQFSEELKNSKKLKFIKEPKETEENKGTTEPKDVHREVKKNPMYTRSSTPKPSPL
EVDSTLSKGRVSEIVLQSPPPEKVAKKRKVERDGNYPVGTATPTKKKREVTESKVQFADI
GGNTKVLEEVCKLLIHIKHPEIFKKLGISPPRGFLLHGPPGCGKTLLAHAIAGELAVPLI
KVAAPELVAGVSGESESRIRDLFEQAVAVAPCVLFIDEVDAVAPHRATAQREMERRIVAQ
LLSCLDDLGSKENGDRVLVLGATNRPDALDPALRRAGRFDREVSLGIPDREARAGILAVI
TTKLALASDVSLTRIAALTPGFVGADLVALIREAAVAAVNRVFGDLKKKTAVETKPVEIE
EPEEVVKSIPDTEVCGNVQPDCDNVPNGTEGSISKDSIVPEIAAAKPENTPMPNELESQN
VDPVEETKKITAFSKSSELTDLMMWLHDQPPLSEEYLQGVFIEHQDFEAALSVVQPSAKR
EGFATVPDVTWDDIGSLQNIRQELQMSILAPVKHSEKCAELGLTTATGVLLCGPPGCGKT
LLAKAIANEAGINFISVKGPELLNMYVGESEKAVRQCFIRARNSAPCVIFFDELDALCPK
RSDGDNSATSRVVNQMLTEMDGVEGRRGVFLMAASNRPDIIDPAVLRPGRLDRILYVGLP
NPTDRVDILRALTKNGVKPKLATDVDLAQIGFSEKCDGYSGADLAALVREAGLEALKELI
NGYQGPVEVAMRHIGIALDKIRPSVQENEIKHYEKLRKIYSPLKDDLDVTPMETPIDAQL
VDTTMEAMET
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatttgtcaaattgaatacttcgctcgacattattcctttgcaaggttcaagt
aatgaggacaaaagcaagaatacaaacaggcagagaattgatgaacttcccagatcagtc
atgagggacccactgatggtttcaagagtctacgcgtttttacttgacaatgaggacaaa
acttatatagatgtgaacgagattgctgattatttacaaaaaagataccgcgactatcgc
acaaagaaacgcagtgcctttagggcaatggtacgtaaggcgtataatgagattgccgac
ggcttagccaaaaagaatgaattcaatcccaatgcgccttggcaagaagatgaagatgat
gatgatgaagaggttgatttggaactagatgctcctattgattcattgaacaatcagctg
ctgaagatgtataaaaagaatttggatggtcagaatggaaactctagtgacaaagagttg
atagatataagcagtgacgatgagcagggtaaaatggaagcaacatcttctggacatgca
aagaagcccaaggaatcccaattttctgaagaactcaaaaattccaagaagctcaaattc
atcaaagagcccaaggagactgaagaaaacaagggaacaactgagccgaaggatgttcat
agagaggtgaagaaaaatcctatgtataccagatcaagcactcctaaaccttcacccttg
gaagtagattccacactttcaaagggacgtgtgtctgaaatagtgttacaatctccccct
ccggagaaagttgctaagaaacgaaaagttgaaagagacggtaattacccagttggcaca
gcaacgccaaccaaaaagaagcgtgaagtgacagaatctaaagttcaatttgccgatatt
ggtgggaatacaaaagttttagaagaagtttgcaagcttttgattcacatcaaacatcct
gagattttcaaaaaattgggtatctctccacctcgagggtttttactccacggaccacca
ggatgtggaaaaacactgttggcacacgcaattgctggggaattagctgtccctctaata
aaagttgctgccccagaacttgtcgcaggtgtttctggagagagtgaatctcgaatacgt
gatttgtttgagcaagcagtagcagtggctccttgtgtcttattcatagatgaagtggac
gctgttgcaccacatagggctacagctcaacgagaaatggaacgacgaattgttgctcag
ttgctttcatgtcttgatgatttgggcagcaaagagaatggtgatcgtgttttggtcctg
ggtgctacaaatagaccagatgcgttggatccggctctgaggcgagctggtcgatttgat
cgtgaagtatcactaggaattcccgatagagaagcaagagctggaattttagctgttatt
acaaccaagctagctctagcatcagacgtcagcttaaccaggatagctgcacttactcca
ggctttgtcggtgcagatttggttgcattaatcagagaagctgccgtcgcagctgttaat
agagtattcggagatctcaagaagaaaactgccgttgaaactaaaccagttgagatcgag
gagccggaagaagttgtcaaaagtattccagatactgaagtttgtggtaatgtacagcca
gattgtgacaacgtaccaaatggaactgaaggaagtatcagcaaagacagcatagtgcca
gaaatcgcggcagcaaagccggaaaatacccctatgccaaacgaactggaatcacaaaat
gttgatccagttgaagaaacaaaaaaaattaccgctttttcaaagtcatcagaattgact
gatttgatgatgtggctccacgaccaaccgccactttcggaagagtaccttcaaggagta
tttatcgaacatcaagattttgaagctgctctgtctgttgttcaaccatctgcaaagaga
gaaggattcgccacagtcccagatgttacgtgggacgatattggatctctacaaaatatt
cgccaagaattgcaaatgtctatactggcacctgtgaagcattccgaaaaatgtgcagag
ctgggccttacgactgcaactggagtcctgctgtgcggtcctcctggttgtggcaagact
ttactggccaaagcaatcgccaatgaagctggcataaactttatttctgtcaaaggaccg
gaactattaaacatgtacgttggagaaagtgagaaggctgttcgacaatgcttcattaga
gcacgaaattctgctccgtgcgttatattcttcgacgaattggatgccctgtgtccaaag
agatcggacggtgataattcggcgacatcccgtgtggtgaaccagatgttgacggaaatg
gatggagttgagggaagacgcggagtttttcttatggctgcaagcaatcgtccagatatc
attgaccctgctgttctgagacctggaaggctcgatagaatcttgtacgtaggattacca
aatccgacagatcgtgttgatatcctgagagctttgacgaagaatggagtaaaaccgaaa
ctagctactgatgtagatctggcccaaataggatttagtgaaaaatgcgatggatattca
ggtgcagatttggctgccttagttagagaggcagggcttgaggcgttgaaagagttaatt
aacggatatcaaggacctgtggaggttgcgatgaggcatattggcattgctcttgacaaa
atacgaccatcggtccaagaaaacgaaattaaacattacgaaaagctgcgaaaaatttat
tcaccactgaaagatgatttggatgttactccaatggaaactccgatagatgcacagttg
gttgacacaacaatggaagcaatggaaacgtga
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