Neodiprion pinetum (white pine sawfly): 124213623
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Entry
124213623 CDS
T08966
Symbol
Chc
Name
(RefSeq) clathrin heavy chain
KO
K04646
clathrin heavy chain
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt04142
Lysosome biogenesis
npt04144
Endocytosis
npt05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124213623 (Chc)
04142 Lysosome biogenesis
124213623 (Chc)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
124213623 (Chc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npt04131
]
124213623 (Chc)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
npt04147
]
124213623 (Chc)
Membrane trafficking [BR:
npt04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
124213623 (Chc)
Exosome [BR:
npt04147
]
Exosomal proteins
Proteins found in most exosomes
124213623 (Chc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
ANAPC3
Motif
Other DBs
NCBI-GeneID:
124213623
NCBI-ProteinID:
XP_046471036
LinkDB
All DBs
Position
3:36040262..36051179
Genome browser
AA seq
1678 aa
AA seq
DB search
MTQLLPIRFQEHLQLTAVGINANNVSFNTLTMESDKFICVREKVADTSQVVIIDMNDSAN
PIRRPISADSAIMNPASKVIALKAQKTLQIFNIEMKSKMKAHTMTEDVVFWKWISLNTLA
LVTETAVYHWSMEGDSQPHKTFDRHSSLNGCQIINYRTDPKQTWLLLIGISAQHNRVVGA
MQLYSVERKCSQPIEGHAASFAQFKMEGNAEPSNLFCFAVRTVQGAKLHIIEVGQPPAGN
QPFPKKAVDVFFPPEAGGDFPVAMQVSSKYDVIYLITKYGYIHMYDIESATCIFMNRISG
ETIFVTAPHEASGGIIGVNRKGQVLSVSVEEENIIPYINGVLQNPELALRMAVRNNLSGA
EDLFVRKFNMLFQNGQYAEAAKVAANAPKGILRTPATIQRFQQVPATQGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLVQGRKQLLEKWLKEDKLECSEELGDLVKQADPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVSYTPDYVFLLRNVMRINPDQGVAFAQMLVQDD
EPLADINQIVDIFMEQNMVQQCTAFLLDALKNNRASEGALQTRLLEMNLMSAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTQMLSPDWLVGFFGTLSV
EDSLECLKAMLTANMRQNLQICVQIATKYHEQLTTKALIDLFESFKSYEGLFYFLGSIVN
FSQDQEVHFKYIQAACKTGQIKEVERICRESNCYNAERVKNFLKEAKLSDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDIIKNLILVVRGQF
STDELVEEVEKRNRLKLLLPWLESRVHEGCVEPATHNALAKIYIDSNNNPERFLKENQFY
DSRVVGKYCEKRDPHLACVAYERGQCDRELISVCNENSLFKSEARYLVRRRDPDLWAEVL
LESNPYKRPLIDQVVQTALSETQDPEDISVTVKAFMTADLPNELIELLEKIVLDSSVFSD
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNKLFEEAFAIFRKFDVNTS
AIQVLIEQVNNLDRAYEFAERCNEPAVWSQLAKAQLQQGLVKEAIDSFIKADDPSAYVDV
VETAHRTSHWEDLVRYLQMARKKARESFVESELIYAYARTNRLADLEEFISGPNHADIQK
IGDRCFDDKMYDAAKLLYNNVSNFARLAITLVHLKEFQGAVDSARKANSTRTWKEVCFAC
VDSGEFRLAQMCGLHIVVHADELEDLIKYYQDRGHFEELINLLEAALGLERAHMGMFTEL
AILYSKYKPQRMREHLDLFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAVLAMMQ
HPTEAWREGHFKDVITKVANVELYYKAIQFYVEYKPLLLNDVLLVLAPRMDHTRAVAYFT
RTGHLQLVKPYLRSVQSLNNKAINEALNGLLIDEEDYQGLRTSIDAFDNFDNIALAQQLE
KHELIEFRRIAAYLYKGNNRWKQSVELCKKDRLFRDAMEYAAESRNAEVAEELLEWFLER
GSKDCFAACLFYCYDLLHPDVILELAWRHRILHFAMPYLIQVAREYITKVDKLEEAESQR
LEETDQQEHKPMIMPEPQLMLTAGPGMMAPGYAPQSVYAPPGQGVYAPPTAAYQGYGM
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagttgctgcccataaggtttcaggagcatctccagctaactgctgtgggaatc
aatgccaacaatgtcagcttcaatacacttacgatggagtcggacaaatttatttgtgta
cgagaaaaggttgcggacacatcgcaagtcgtcattatcgatatgaatgactctgccaat
ccaattaggagaccaatttcagccgattctgcaattatgaatcctgcgagtaaagtaata
gctttgaaagcccaaaagacgttgcaaatcttcaacattgagatgaaatcaaaaatgaaa
gcccataccatgacggaagatgttgtattttggaagtggatttccttgaatactctggcc
ctagtcactgaaactgctgtctatcattggtccatggaaggagattctcagcctcataaa
acattcgatcgtcactcatcattgaacggatgtcagatcataaactacagaactgaccca
aaacaaacttggttattgctgattggaatttcggcgcaacataacagggtcgttggcgcg
atgcagttgtattccgtagaacgcaaatgttctcaaccaattgaagggcatgctgcttcc
tttgcgcaattcaaaatggagggcaatgcagaacccagcaatctattttgttttgctgta
aggactgtccaaggtgctaagttgcatattatagaggttggtcaacctccagctgggaat
caaccttttcccaagaaagcagtcgacgttttctttccacccgaagctggaggtgatttt
ccagttgcaatgcaggtcagctcgaaatatgacgtgatatatttaatcaccaaatacggc
tacatccatatgtatgacatagaatcagcaacttgtatatttatgaaccgtatctctgga
gaaacaatttttgtgaccgctccccatgaagcttctgggggaatcatcggagtcaatcgt
aaggggcaagtattgtctgtttccgtcgaagaagagaacataattccatacattaatgga
gttcttcagaatcctgaactagctctgagaatggctgttagaaacaatttgtctggggcg
gaagacttgtttgtgagaaaattcaacatgcttttccaaaatggccagtatgccgaggct
gccaaagttgctgccaatgctccaaaaggtatccttaggactccggcaaccattcagcgt
ttccagcaggtcccagctacgcaggggcagacatctccgttgcttcagtactttggtata
ctgttggatcaaggtcaactaaacaagtatgagtcattggaactctgccgtcctgtcttg
gtgcaaggacgcaagcaacttcttgaaaaatggttgaaggaagacaaattggaatgcagt
gaagaattaggggatcttgttaaacaagctgatccaactcttgccttgagtgtttacctc
cgggcgaacgtacccaacaaagttatccaatgttttgctgagactgggcaattccaaaaa
attgttctgtatgccaagaaggtttcgtacactccggattatgtattcttgctgcgaaat
gtgatgagaattaatcctgaccaaggtgttgcttttgcgcaaatgttggttcaggatgac
gaacctctggctgacatcaatcagattgtagacatattcatggaacagaacatggtgcaa
cagtgtacagcatttttgttagatgcattgaagaataatcgagctagtgaaggtgcatta
caaactcgcttattggaaatgaatttgatgtctgctccccaagtggcggatgccatactt
gggaatcaaatgtttacgcactatgatcgtgcccatgttgcccagttatgtgagaaagca
ggtcttctacaacgagctctggagcattacacagacttatatgacattaagcgagctgta
gtccatacgcagatgctgtcgcctgattggctagttggattcttcggtactctatctgta
gaagactccttggaatgcttgaaagctatgctaactgcaaacatgagacaaaacttgcag
atctgtgtacagatagcaacaaagtaccatgagcaactgaccaccaaggctttgattgat
ttgttcgagagctttaaatcttacgaaggattgttctatttccttggatcgattgtgaac
ttcagtcaagatcaggaagttcatttcaaatatatccaagctgcctgtaaaacaggacag
atcaaggaagttgagagaatatgtcgtgagagcaattgctacaatgcggaaagagtcaag
aattttttgaaggaagcaaaattgtctgatcaattgcctcttatcattgtttgcgatcga
ttcgactttgtgcacgatcttgttttgtacctgtacagaaacaatctacaaaaatacatc
gagatatatgttcaaaaggtcaacccatcgagattacctgttgtaattggtggattgttg
gatgtcgactgttcagaagatataataaaaaacctcattcttgtcgtccggggtcagttc
tctacagacgaactggttgaggaggttgaaaaacgtaatcgactcaagctcttgttgcct
tggttggaatctcgtgttcacgaaggctgtgtggagcctgccacccataatgctttagct
aaaatttatatcgatagtaacaataatcctgagagattcctcaaggaaaatcagttctac
gatagccgtgttgtcggtaaatattgcgagaaacgtgatcctcatttagcatgtgtagcg
tatgaacgtggtcaatgcgatcgagaattaatcagcgtatgcaatgaaaatagtcttttc
aaaagtgaagccagatatttggtcagacgacgagaccctgatctctgggccgaggttctc
ttggaaagtaatccctacaagagaccacttattgatcaggtggttcaaactgcactgtca
gagacccaagatccagaagacatttctgtaactgtaaaggccttcatgacagctgacttg
ccaaatgaattgattgaattgcttgaaaaaattgtacttgacagcagtgtctttagcgat
catcgtaatctacaaaatctgctgattttgacagcaataaaagcagatcgcacacgcgtt
atggagtacataaatcgtctggacaactatgatgcacccgatatagccaacattgctatc
agcaacaaattattcgaagaagctttcgccattttccggaaattcgatgtcaatacttca
gctattcaagtgctgattgaacaagtgaataatttggatagggcttatgaatttgccgaa
agatgcaacgaaccagcagtgtggtcacagctggctaaagctcagctacaacagggtcta
gtgaaagaggccattgacagtttcatcaaagccgatgatccatcagcatacgtcgatgta
gttgagactgctcatcgaacttcccactgggaagatcttgttcgctacttgcaaatggct
cgcaagaaggcgagagagtcctttgttgaaagcgaactcatttacgcgtatgctcgcacc
aatcgccttgctgatcttgaagagtttatctctggtccaaatcacgctgatattcaaaag
atcggtgatcgttgtttcgatgacaaaatgtacgacgcagcaaaacttttgtacaacaac
gtatccaactttgctcgattagcgattactctcgttcacttgaaagagtttcaaggagcc
gttgatagcgctcgtaaagcaaattctacacgcacatggaaagaggtgtgttttgcttgt
gtggacagcggagaatttcgattggcccaaatgtgtggtctgcacatagttgttcacgcc
gacgagcttgaggacttgatcaaatattatcaagatcgcggacactttgaagaactcatc
aatctattggaggctgcgttaggtttggagagggctcacatgggaatgttcacagaactt
gctattctatacagcaagtacaagccacaacggatgcgtgagcatctcgacctcttctgg
tctcgtgtgaacataccgaaggtattgcgcgcggcggaacaagctcatttatgggcggag
cttgtattcttgtatgacaaatatgaagaatttgataacgcggtactagcaatgatgcag
catccaacagaagcgtggcgcgaaggtcatttcaaagatgtgatcaccaaggtagctaat
gtggaattgtactacaaggcgatccaattctacgtagaatacaagccactattgctgaat
gatgttctacttgtccttgcaccaagaatggatcatacaagagcggttgcttacttcact
cgtacaggacatttgcaacttgtgaagccttatcttagatcggtccaatctttgaacaac
aaagctataaatgaagcattgaatggtcttctcattgacgaggaagattatcaaggtttg
aggacgtcaatagacgcttttgataactttgataacattgctctcgctcagcagcttgag
aaacacgagctaatcgagtttagaaggattgcggcgtacctgtacaaaggcaataacaga
tggaaacaatcggttgaactttgcaaaaaagacaggctattccgagatgctatggagtat
gctgcggagtctaggaatgcagaggtagctgaggaactgctagaatggttcttagagaga
ggatcaaaagattgttttgcagcttgcctcttctactgttacgacttgcttcatcccgat
gtaattttggaacttgcctggaggcacagaatccttcacttcgcaatgccttatctaatt
caagttgcccgagagtacatcaccaaggttgataaactcgaagaggctgaaagccagcgc
ttggaagaaacagatcaacaggagcacaaaccaatgatcatgcctgagccacagttgatg
ttgacagcaggaccaggaatgatggcaccaggttacgcacctcaaagtgtttatgcacct
ccgggtcaaggagtttatgcacctcctactgcagcctatcagggctacggtatgtga
DBGET
integrated database retrieval system
